MGE detailed information
MGE type: Genomic_island MGE length: 10274 bp
Accession: NZ_CP117359 Location: 834756..845029 Organism: Salmonella enterica subsp. enterica serovar Dublin strain RM094 Replicon: chromosome
Accession: NZ_CP117359 Location: 834756..845029 Organism: Salmonella enterica subsp. enterica serovar Dublin strain RM094 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PQP87_RS04010 (830224) | 830224..831741 | + | 1518 | WP_000003339.1 | lysine--tRNA ligase | - |
| PQP87_RS04015 (831817) | 831817..832362 | - | 546 | WP_000133994.1 | isopentenyl-diphosphate Delta-isomerase | - |
| PQP87_RS04020 (832627) | 832627..833385 | + | 759 | WP_000244328.1 | amidase activator ActS | - |
| PQP87_RS04030 (833670) | 833670..834476 | - | 807 | WP_001574939.1 | DUF1460 domain-containing protein | - |
| PQP87_RS04035 (834756) | 834756..835007 | - | 252 | WP_001576352.1 | hypothetical protein | - |
| PQP87_RS04040 (835216) | 835216..835443 | + | 228 | WP_000557549.1 | toxin-antitoxin system antitoxin VapB | Antitoxin Detail |
| PQP87_RS04045 (835443) | 835443..835841 | + | 399 | WP_000911336.1 | tRNA(fMet)-specific endonuclease VapC | Toxin Detail |
| PQP87_RS04050 (836647) | 836647..837183 | + | 537 | WP_001038502.1 | Attachment invasion locus protein | VF |
| PQP87_RS04055 (837230) | 837230..837862 | + | 633 | WP_000835265.1 | YfdX family protein | - |
| PQP87_RS04060 (838581) | 838581..839162 | + | 582 | WP_001244651.1 | putative fimbrial-like protein YbgD | VF |
| PQP87_RS04065 (839282) | 839282..841771 | + | 2490 | WP_000705504.1 | Outer membrane usher protein PapC | VF |
| PQP87_RS04070 (841812) | 841812..842555 | + | 744 | WP_000798504.1 | Chaperone protein PapD | VF |
| PQP87_RS04075 (842552) | 842552..843628 | + | 1077 | WP_000141331.1 | hypothetical protein | - |
| PQP87_RS04080 (843772) | 843772..844284 | + | 513 | WP_000336258.1 | CaiF/GrlA family transcriptional regulator | - |
| PQP87_RS04085 (844271) | 844271..845029 | + | 759 | WP_000134794.1 | transcriptional regulator | - |
| PQP87_RS04090 (845239) | 845239..846135 | - | 897 | WP_000503673.1 | nickel/cobalt efflux protein RcnA | - |
| PQP87_RS04095 (846256) | 846256..846528 | + | 273 | WP_000019953.1 | Ni(II)/Co(II)-binding transcriptional repressor RcnR | - |
| PQP87_RS04100 (846559) | 846559..847788 | - | 1230 | WP_000036836.1 | amino acid permease | - |
| PQP87_RS04105 (847930) | 847930..848385 | - | 456 | WP_001574932.1 | multidrug/biocide efflux PACE transporter | - |
| PQP87_RS04110 (848489) | 848489..849352 | + | 864 | WP_001270781.1 | LysR family transcriptional regulator | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|