MGE detailed information
MGE type: IScluster/Tn MGE length: 3104 bp
Accession: NZ_CP117359 Location: 4193879..4196982 Organism: Salmonella enterica subsp. enterica serovar Dublin strain RM094 Replicon: chromosome
Accession: NZ_CP117359 Location: 4193879..4196982 Organism: Salmonella enterica subsp. enterica serovar Dublin strain RM094 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PQP87_RS20655 (4189168) | 4189168..4189614 | - | 447 | WP_001077813.1 | SEF18 fimbria major subunit SefD | - |
| PQP87_RS20660 (4189611) | 4189611..4192055 | - | 2445 | WP_000753927.1 | SEF14/SEF18 fimbria usher protein SefC | - |
| PQP87_RS20665 (4192072) | 4192072..4192812 | - | 741 | WP_001575372.1 | SEF14/SEF18 fimbria chaperone SefB | - |
| PQP87_RS20670 (4192934) | 4192934..4193464 | - | 531 | WP_000909460.1 | SEF14 fimbria major subunit SefA | - |
| PQP87_RS20675 (4193787) | 4193787..4194920 | + | 1134 | Protein_4046 | IS3 family transposase | - |
| PQP87_RS20680 (4194952) | 4194952..4195092 | - | 141 | Protein_4047 | Arm DNA-binding domain-containing protein | - |
| PQP87_RS20685 (4195498) | 4195498..4195806 | - | 309 | WP_001199743.1 | CcdB family protein | Toxin Detail |
| PQP87_RS20690 (4195809) | 4195809..4196048 | - | 240 | WP_001118105.1 | type II toxin-antitoxin system CcdA family antitoxin | Antitoxin Detail |
| PQP87_RS20695 (4196157) | 4196157..4196405 | - | 249 | WP_000168389.1 | ribbon-helix-helix domain-containing protein | - |
| PQP87_RS20700 (4196596) | 4196596..4197027 | - | 432 | Protein_4051 | IS630 family transposase ISEc33 | Transposase |
| PQP87_RS20710 (4197784) | 4197784..4198803 | + | 1020 | WP_000152558.1 | NAD(P)-dependent alcohol dehydrogenase | - |
| PQP87_RS20715 (4198831) | 4198831..4199361 | - | 531 | WP_000896758.1 | gluconokinase | - |
| PQP87_RS20720 (4199578) | 4199578..4200609 | + | 1032 | WP_000453348.1 | L-idonate 5-dehydrogenase | - |
| PQP87_RS20725 (4200634) | 4200634..4201398 | + | 765 | WP_001061034.1 | gluconate 5-dehydrogenase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|