MGE detailed information
MGE type: Conjugative plasmid MGE length: 86282 bp
Accession: NZ_CP117344 Location: 1..86282 Organism: Salmonella enterica subsp. enterica serovar Dublin strain RM105 Replicon: plasmid pRM105_1
Accession: NZ_CP117344 Location: 1..86282 Organism: Salmonella enterica subsp. enterica serovar Dublin strain RM105 Replicon: plasmid pRM105_1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PQP76_RS23730 (PQP76_23730) | 1..1101 | + | 1101 | WP_000350011.1 | RepB family plasmid replication initiator protein | - |
| PQP76_RS23735 (PQP76_23735) | 2138..2572 | - | 435 | WP_000883925.1 | hypothetical protein | - |
| PQP76_RS23740 (PQP76_23740) | 2590..3705 | - | 1116 | WP_000946102.1 | phosphoadenosine phosphosulfate reductase family protein | - |
| PQP76_RS23745 (PQP76_23745) | 3974..4582 | + | 609 | WP_000849071.1 | hypothetical protein | - |
| PQP76_RS23750 (PQP76_23750) | 4587..5108 | + | 522 | WP_000393785.1 | hypothetical protein | - |
| PQP76_RS23755 (PQP76_23755) | 5111..5632 | + | 522 | WP_000805800.1 | hypothetical protein | - |
| PQP76_RS23760 (PQP76_23760) | 5729..6202 | + | 474 | WP_000057877.1 | hypothetical protein | - |
| PQP76_RS23765 (PQP76_23765) | 6213..6506 | + | 294 | WP_001370730.1 | hypothetical protein | - |
| PQP76_RS23770 (PQP76_23770) | 6511..7365 | + | 855 | WP_000539392.1 | hypothetical protein | - |
| PQP76_RS23775 (PQP76_23775) | 7365..8324 | + | 960 | WP_000829616.1 | S49 family peptidase | - |
| PQP76_RS23780 (PQP76_23780) | 8340..9200 | + | 861 | WP_000139698.1 | DsbA family protein | - |
| PQP76_RS23785 (PQP76_23785) | 9234..9662 | + | 429 | WP_000591074.1 | hypothetical protein | - |
| PQP76_RS23790 (PQP76_23790) | 9719..10078 | + | 360 | WP_000422768.1 | hypothetical protein | - |
| PQP76_RS23795 (PQP76_23795) | 10078..10524 | + | 447 | WP_000919345.1 | Fe3+-siderophore ABC transporter permease | - |
| PQP76_RS23800 (PQP76_23800) | 10521..11039 | + | 519 | WP_000210756.1 | nitrite reductase | - |
| PQP76_RS23805 (PQP76_23805) | 11039..11269 | + | 231 | WP_000972663.1 | hypothetical protein | - |
| PQP76_RS23810 (PQP76_23810) | 11256..12113 | + | 858 | WP_001167032.1 | hypothetical protein | - |
| PQP76_RS23815 (PQP76_23815) | 12344..12871 | + | 528 | WP_001236377.1 | thermonuclease family protein | - |
| PQP76_RS23820 (PQP76_23820) | 12929..13201 | + | 273 | WP_001043047.1 | HU family DNA-binding protein | - |
| PQP76_RS23825 (PQP76_23825) | 13289..13582 | + | 294 | WP_001239997.1 | chromosome segregation protein ParM | - |
| PQP76_RS23830 (PQP76_23830) | 13609..13911 | - | 303 | WP_000124640.1 | XRE family transcriptional regulator | Antitoxin Detail |
| PQP76_RS23835 (PQP76_23835) | 13916..14266 | - | 351 | WP_000270043.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| PQP76_RS23840 (PQP76_23840) | 14429..14977 | + | 549 | WP_001061574.1 | transcriptional regulator | - |
| PQP76_RS23845 (PQP76_23845) | 15318..15512 | + | 195 | WP_000343597.1 | hypothetical protein | - |
| PQP76_RS23850 (PQP76_23850) | 15523..15894 | + | 372 | WP_000516916.1 | hypothetical protein | - |
| PQP76_RS23855 (PQP76_23855) | 15887..16357 | + | 471 | WP_001281821.1 | hypothetical protein | - |
| PQP76_RS23860 (PQP76_23860) | 16372..16707 | - | 336 | WP_000683476.1 | hypothetical protein | - |
| PQP76_RS23865 (PQP76_23865) | 16804..17292 | + | 489 | WP_001273096.1 | DUF1643 domain-containing protein | - |
| PQP76_RS23870 (PQP76_23870) | 17295..17792 | + | 498 | WP_000062185.1 | hypothetical protein | - |
| PQP76_RS23875 (PQP76_23875) | 18007..18711 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| PQP76_RS23880 (PQP76_23880) | 19018..19197 | + | 180 | Protein_31 | helix-turn-helix domain-containing protein | - |
| PQP76_RS23885 (PQP76_23885) | 19262..19966 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| PQP76_RS23890 (PQP76_23890) | 19972..20112 | + | 141 | WP_001044210.1 | hypothetical protein | - |
| PQP76_RS23895 (PQP76_23895) | 20598..21335 | + | 738 | WP_001366550.1 | Tn3 family transposase TnpR_TnEc1 | Transposase |
| PQP76_RS23900 (PQP76_23900) | 21332..21556 | + | 225 | WP_000743213.1 | hypothetical protein | - |
| PQP76_RS23905 (PQP76_23905) | 21767..23260 | + | 1494 | WP_001120888.1 | IS91 family transposase ISVsa3 | Transposase |
| PQP76_RS23910 (PQP76_23910) | 23291..24175 | + | 885 | WP_012728215.1 | DUF3363 domain-containing protein | - |
| PQP76_RS23915 (PQP76_23915) | 24392..25606 | + | 1215 | WP_012728216.1 | Bicyclomycin resistance protein | ARG |
| PQP76_RS23920 (PQP76_23920) | 25634..25939 | + | 306 | WP_001255015.1 | HTH-type transcriptional regulator CynR | VF |
| PQP76_RS23925 (PQP76_23925) | 26051..26239 | + | 189 | Protein_40 | IS91 family transposase | - |
| PQP76_RS23930 (PQP76_23930) | 26206..27405 | - | 1200 | WP_000804063.1 | Tetracycline resistance protein, class C | ARG |
| PQP76_RS23935 (PQP76_23935) | 27511..28161 | + | 651 | WP_000164043.1 | tetracycline resistance transcriptional repressor TetR(A) | - |
| PQP76_RS23940 (PQP76_23940) | 28193..28435 | - | 243 | WP_000844627.1 | transposase | - |
| PQP76_RS23945 (PQP76_23945) | 28741..29577 | - | 837 | WP_000480968.1 | hypothetical protein | ARG |
| PQP76_RS23950 (PQP76_23950) | 29577..30380 | - | 804 | WP_001082319.1 | Aminoglycoside 3'-phosphotransferase | ARG |
| PQP76_RS23955 (PQP76_23955) | 30441..31256 | - | 816 | WP_001043260.1 | Dihydropteroate synthase | ARG |
| PQP76_RS23960 (PQP76_23960) | 31563..31874 | + | 312 | WP_000338945.1 | hypothetical protein | - |
| PQP76_RS23965 (PQP76_23965) | 32048..32833 | + | 786 | WP_001151304.1 | Sporulation initiation inhibitor protein Soj | VF |
| PQP76_RS23970 (PQP76_23970) | 32837..34018 | + | 1182 | WP_001207227.1 | KorB domain-containing protein | - |
| PQP76_RS23975 (PQP76_23975) | 34067..34339 | + | 273 | WP_000703827.1 | helix-turn-helix domain-containing protein | - |
| PQP76_RS23980 (PQP76_23980) | 34392..35027 | - | 636 | WP_000074431.1 | N-6 DNA methylase | - |
| PQP76_RS23985 (PQP76_23985) | 35119..35262 | - | 144 | WP_000939033.1 | hypothetical protein | - |
| PQP76_RS23990 (PQP76_23990) | 35589..35966 | + | 378 | WP_001125904.1 | hypothetical protein | - |
| PQP76_RS23995 (PQP76_23995) | 35959..36240 | + | 282 | WP_000044823.1 | hypothetical protein | - |
| PQP76_RS24000 (PQP76_24000) | 36215..36889 | + | 675 | WP_000344149.1 | hypothetical protein | - |
| PQP76_RS24005 (PQP76_24005) | 36882..37388 | + | 507 | WP_000566443.1 | hypothetical protein | - |
| PQP76_RS24010 (PQP76_24010) | 37394..37705 | + | 312 | WP_001447539.1 | hypothetical protein | - |
| PQP76_RS24015 (PQP76_24015) | 37714..38214 | + | 501 | WP_000647188.1 | hypothetical protein | - |
| PQP76_RS24020 (PQP76_24020) | 38218..39645 | + | 1428 | WP_000936897.1 | DNA cytosine methyltransferase | - |
| PQP76_RS24025 (PQP76_24025) | 39645..40301 | + | 657 | WP_000268552.1 | hypothetical protein | - |
| PQP76_RS24030 (PQP76_24030) | 40357..40974 | + | 618 | WP_000464630.1 | hypothetical protein | - |
| PQP76_RS24035 (PQP76_24035) | 41207..41485 | + | 279 | WP_000746034.1 | hypothetical protein | - |
| PQP76_RS24040 (PQP76_24040) | 41576..42064 | - | 489 | WP_000467110.1 | hypothetical protein | - |
| PQP76_RS24045 (PQP76_24045) | 42079..44271 | - | 2193 | WP_000366823.1 | DNA topoisomerase 3 | - |
| PQP76_RS24050 (PQP76_24050) | 44271..44504 | - | 234 | WP_001191890.1 | hypothetical protein | - |
| PQP76_RS24055 (PQP76_24055) | 44486..45103 | - | 618 | WP_001249395.1 | hypothetical protein | - |
| PQP76_RS24060 (PQP76_24060) | 45271..48243 | + | 2973 | WP_001326173.1 | hypothetical protein | Relaxase |
| PQP76_RS24065 (PQP76_24065) | 48240..50105 | + | 1866 | WP_077779971.1 | conjugative transfer system coupling protein TraD | - |
| PQP76_RS24070 (PQP76_24070) | 50155..50700 | + | 546 | WP_000228720.1 | hypothetical protein | - |
| PQP76_RS24075 (PQP76_24075) | 50657..51286 | + | 630 | WP_000743449.1 | DUF4400 domain-containing protein | - |
| PQP76_RS24080 (PQP76_24080) | 51296..51742 | + | 447 | WP_000122507.1 | hypothetical protein | - |
| PQP76_RS24085 (PQP76_24085) | 51752..52129 | + | 378 | WP_000869297.1 | hypothetical protein | - |
| PQP76_RS24090 (PQP76_24090) | 52129..52791 | + | 663 | WP_001231464.1 | hypothetical protein | - |
| PQP76_RS24095 (PQP76_24095) | 53127..53492 | + | 366 | WP_001052530.1 | hypothetical protein | - |
| PQP76_RS24100 (PQP76_24100) | 53637..53918 | + | 282 | WP_000805625.1 | type IV conjugative transfer system protein TraL | - |
| PQP76_RS24105 (PQP76_24105) | 53915..54541 | + | 627 | WP_001049717.1 | TraE/TraK family type IV conjugative transfer system protein | - |
| PQP76_RS24110 (PQP76_24110) | 54525..55442 | + | 918 | WP_000794249.1 | type-F conjugative transfer system secretin TraK | - |
| PQP76_RS24115 (PQP76_24115) | 55442..56755 | + | 1314 | WP_024131605.1 | TraB/VirB10 family protein | - |
| PQP76_RS24120 (PQP76_24120) | 56752..57330 | + | 579 | WP_000793435.1 | type IV conjugative transfer system lipoprotein TraV | - |
| PQP76_RS24125 (PQP76_24125) | 57334..57726 | + | 393 | WP_000479535.1 | TraA family conjugative transfer protein | - |
| PQP76_RS24130 (PQP76_24130) | 58011..59273 | + | 1263 | WP_000608644.1 | IS1380 family transposase ISEcp1 | Transposase |
| PQP76_RS24135 (PQP76_24135) | 59597..60742 | + | 1146 | WP_000976514.1 | Beta-lactamase | ARG |
| PQP76_RS24140 (PQP76_24140) | 60836..61417 | + | 582 | WP_058663077.1 | lipocalin family protein | - |
| PQP76_RS24145 (PQP76_24145) | 61363..62067 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| PQP76_RS24150 (PQP76_24150) | 62132..64294 | + | 2163 | Protein_85 | tRNA(Glu)-specific nuclease WapA | VF |
| PQP76_RS24155 (PQP76_24155) | 64284..64706 | + | 423 | WP_001165345.1 | hypothetical protein | - |
| PQP76_RS24160 (PQP76_24160) | 64877..65329 | + | 453 | Protein_87 | hypothetical protein | - |
| PQP76_RS24165 (PQP76_24165) | 65345..65947 | - | 603 | WP_000278322.1 | hypothetical protein | - |
| PQP76_RS24170 (PQP76_24170) | 66217..66498 | + | 282 | WP_000575657.1 | hypothetical protein | - |
| PQP76_RS24175 (PQP76_24175) | 66797..67333 | + | 537 | WP_000949433.1 | hypothetical protein | - |
| PQP76_RS24180 (PQP76_24180) | 67336..68346 | + | 1011 | WP_000543934.1 | IS91 family transposase ISWz1 | Transposase |
| PQP76_RS24185 (PQP76_24185) | 68351..69220 | + | 870 | WP_012728230.1 | 3'-5' exonuclease | - |
| PQP76_RS24190 (PQP76_24190) | 69217..69708 | + | 492 | WP_000139717.1 | hypothetical protein | - |
| PQP76_RS24195 (PQP76_24195) | 70035..70910 | + | 876 | WP_001097010.1 | DNA replication terminus site-binding protein | - |
| PQP76_RS24200 (PQP76_24200) | 71055..72095 | + | 1041 | WP_139758435.1 | DNA-binding protein | - |
| PQP76_RS24205 (PQP76_24205) | 72382..73893 | + | 1512 | WP_000811656.1 | UvrD-helicase domain-containing protein | - |
| PQP76_RS24210 (PQP76_24210) | 74004..75044 | + | 1041 | WP_001326396.1 | conjugal transfer protein TraF | - |
| PQP76_RS24215 (PQP76_24215) | 75046..76479 | + | 1434 | WP_000256129.1 | conjugal transfer protein TraH | - |
| PQP76_RS24220 (PQP76_24220) | 76492..80106 | + | 3615 | WP_000534551.1 | conjugal transfer protein TraG N-terminal domain-containing protein | - |
| PQP76_RS24225 (PQP76_24225) | 80144..80506 | - | 363 | WP_000683483.1 | hypothetical protein | - |
| PQP76_RS24230 (PQP76_24230) | 81222..81494 | + | 273 | WP_000356489.1 | helix-turn-helix domain-containing protein | - |
| PQP76_RS24235 (PQP76_24235) | 81494..82027 | + | 534 | WP_000790610.1 | transglycosylase SLT domain-containing protein | - |
| PQP76_RS24240 (PQP76_24240) | 82038..82646 | + | 609 | WP_000891157.1 | hypothetical protein | - |
| PQP76_RS24245 (PQP76_24245) | 82643..83194 | + | 552 | WP_001020646.1 | FlhC family transcriptional regulator | - |
| PQP76_RS24250 (PQP76_24250) | 83254..83673 | - | 420 | WP_000651490.1 | H-NS family nucleoid-associated regulatory protein | - |
| PQP76_RS24255 (PQP76_24255) | 83675..83968 | - | 294 | WP_000919078.1 | hypothetical protein | - |
| PQP76_RS24260 (PQP76_24260) | 83985..84968 | - | 984 | WP_000077458.1 | ParM/StbA family protein | - |
| PQP76_RS24265 (PQP76_24265) | 85467..86006 | + | 540 | WP_001447712.1 | conjugative transfer protein MobI(A/C) | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|