MGE detailed information
MGE type: Prophage MGE length: 89976 bp
Accession: NZ_CP117336 Location: 2657828..2747803 Organism: Salmonella enterica subsp. enterica serovar Dublin strain RM052 Replicon: chromosome
Accession: NZ_CP117336 Location: 2657828..2747803 Organism: Salmonella enterica subsp. enterica serovar Dublin strain RM052 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PQP91_RS13065 () | 2653341..2653838 | - | 498 | WP_001518229.1 | GAF domain-containing protein | - |
| PQP91_RS13070 () | 2653967..2655250 | + | 1284 | WP_001207294.1 | membrane integrity lipid transport subunit YebS | - |
| PQP91_RS13075 () | 2655219..2657852 | + | 2634 | WP_001752430.1 | PqiB family protein | - |
| PQP91_RS13080 () | 2657930..2659369 | + | 1440 | WP_001531515.1 | 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF | - |
| PQP91_RS13085 () | 2659487..2659723 | + | 237 | WP_024131108.1 | YebV family protein | - |
| PQP91_RS13090 () | 2659834..2660025 | + | 192 | WP_000457838.1 | DUF1482 family protein | - |
| PQP91_RS13095 () | 2660044..2660694 | - | 651 | WP_000986173.1 | protein-serine/threonine phosphatase | - |
| PQP91_RS13100 () | 2660918..2661082 | - | 165 | WP_001134856.1 | membrane protein | - |
| PQP91_RS13105 () | 2661367..2662089 | - | 723 | WP_000182072.1 | Guanine nucleotide exchange factor sopE2 | VF |
| PQP91_RS13110 () | 2662773..2663114 | + | 342 | WP_001752424.1 | DUF1398 family protein | - |
| PQP91_RS13115 () | 2663496..2663972 | + | 477 | WP_000030946.1 | hypothetical protein | - |
| PQP91_RS13120 () | 2664345..2664764 | - | 420 | WP_000354407.1 | GNAT family N-acetyltransferase | - |
| PQP91_RS13125 () | 2665134..2665403 | + | 270 | WP_001752421.1 | hypothetical protein | - |
| PQP91_RS13130 () | 2665569..2665709 | + | 141 | WP_001617922.1 | hypothetical protein | - |
| PQP91_RS13135 () | 2665855..2667049 | - | 1195 | Protein_2569 | IS256 family transposase IS285 | Transposase |
| PQP91_RS24710 () | 2667425..2667541 | + | 117 | WP_231919481.1 | integrase | - |
| PQP91_RS13145 () | 2668837..2669752 | + | 916 | Protein_2571 | DMT family transporter | - |
| PQP91_RS13150 () | 2669885..2670043 | + | 159 | WP_000480735.1 | DUF5993 family protein | - |
| PQP91_RS13155 () | 2670053..2670667 | + | 615 | WP_000848073.1 | disulfide bond formation protein B | - |
| PQP91_RS13160 () | 2670994..2671161 | - | 168 | WP_001751917.1 | helix-turn-helix domain-containing protein | - |
| PQP91_RS13165 () | 2671815..2671940 | - | 126 | WP_001574229.1 | hypothetical protein | - |
| PQP91_RS13170 () | 2671940..2672119 | + | 180 | Protein_2576 | IS3 family transposase | - |
| PQP91_RS13175 () | 2672508..2672708 | + | 201 | WP_001751604.1 | PagK family vesicle-borne virulence factor | - |
| PQP91_RS13180 () | 2672805..2673280 | - | 476 | Protein_2578 | tail fiber assembly protein | - |
| PQP91_RS13185 () | 2673297..2673632 | - | 336 | Protein_2579 | macro domain-containing protein | - |
| PQP91_RS13190 () | 2673847..2674112 | - | 266 | Protein_2580 | DUF1441 family protein | - |
| PQP91_RS13195 () | 2674167..2674358 | + | 192 | WP_001034751.1 | hypothetical protein | - |
| PQP91_RS13200 () | 2674423..2674590 | + | 168 | WP_000789530.1 | lytic enzyme | - |
| PQP91_RS13205 () | 2674847..2675380 | - | 534 | WP_000055326.1 | DUF2514 domain-containing protein | - |
| PQP91_RS13210 () | 2675377..2675625 | - | 249 | Protein_2584 | glycoside hydrolase family 19 protein | - |
| PQP91_RS13215 () | 2675773..2676768 | + | 996 | Protein_2585 | PD-(D/E)XK nuclease-like domain-containing protein | - |
| PQP91_RS13220 () | 2676798..2677877 | + | 1080 | WP_000087644.1 | hypothetical protein ; Integrase | Integrase |
| PQP91_RS13225 () | 2678831..2679631 | + | 801 | WP_001536069.1 | hypothetical protein | - |
| PQP91_RS13230 () | 2679660..2679901 | - | 242 | Protein_2588 | recombinase family protein | - |
| PQP91_RS13235 () | 2680111..2680833 | + | 723 | WP_000161701.1 | Guanine nucleotide exchange factor SopE | VF |
| PQP91_RS13240 () | 2681035..2681604 | - | 570 | WP_000143180.1 | tail fiber assembly protein | - |
| PQP91_RS13245 () | 2681604..2684021 | - | 2418 | WP_001574223.1 | prophage tail fiber N-terminal domain-containing protein | - |
| PQP91_RS13250 () | 2684075..2684317 | - | 243 | WP_000178848.1 | hypothetical protein | - |
| PQP91_RS13255 () | 2684356..2685219 | - | 864 | WP_072100756.1 | DUF1983 domain-containing protein | - |
| PQP91_RS13260 () | 2685259..2687708 | - | 2450 | Protein_2594 | host specificity protein J | - |
| PQP91_RS13265 () | 2687780..2688484 | - | 705 | WP_001576012.1 | tail assembly protein | - |
| PQP91_RS13270 () | 2688388..2689119 | - | 732 | WP_000606352.1 | C40 family peptidase | - |
| PQP91_RS13275 () | 2689129..2689824 | - | 696 | WP_001152416.1 | phage minor tail protein L | - |
| PQP91_RS13280 () | 2689914..2690447 | + | 534 | WP_000877926.1 | Superoxide dismutase [Cu-Zn] 1 | VF |
| PQP91_RS13285 () | 2690564..2691061 | - | 498 | WP_000725268.1 | Attachment invasion locus protein | VF |
| PQP91_RS13290 () | 2691160..2691492 | - | 333 | WP_000978295.1 | phage tail protein | - |
| PQP91_RS13295 () | 2691489..2694476 | - | 2988 | WP_077906652.1 | phage tail tape measure protein | - |
| PQP91_RS13300 () | 2694556..2694885 | - | 330 | WP_010989009.1 | phage tail assembly protein T | - |
| PQP91_RS13305 () | 2694882..2695280 | - | 399 | WP_000478858.1 | phage minor tail protein G | - |
| PQP91_RS13310 () | 2695326..2696075 | - | 750 | WP_000132757.1 | phage tail protein | - |
| PQP91_RS13315 () | 2696087..2696488 | - | 402 | WP_000196703.1 | phage minor tail U family protein | - |
| PQP91_RS13320 () | 2696485..2697051 | - | 567 | WP_000453192.1 | phage tail protein | - |
| PQP91_RS13325 () | 2697032..2697331 | - | 300 | WP_000774239.1 | ATP-binding protein | - |
| PQP91_RS13330 () | 2697324..2697647 | - | 324 | WP_001107908.1 | DUF2190 family protein | - |
| PQP91_RS13335 () | 2697738..2699819 | - | 2082 | WP_010989008.1 | ATP-dependent Clp protease proteolytic subunit | VF |
| PQP91_RS13340 () | 2699743..2701290 | - | 1548 | WP_001009211.1 | phage portal protein | - |
| PQP91_RS13345 () | 2701287..2701493 | - | 207 | WP_000196190.1 | hypothetical protein | - |
| PQP91_RS13350 () | 2701490..2703628 | - | 2139 | WP_000989241.1 | phage terminase large subunit family protein | - |
| PQP91_RS13355 () | 2703585..2704118 | - | 534 | WP_024139201.1 | DUF1441 family protein | - |
| PQP91_RS13360 () | 2704326..2704805 | - | 480 | WP_001541990.1 | lysis protein | - |
| PQP91_RS13365 () | 2704823..2705275 | - | 453 | WP_000984586.1 | glycoside hydrolase family protein | - |
| PQP91_RS13370 () | 2705259..2705588 | - | 330 | WP_001574216.1 | phage holin, lambda family | - |
| PQP91_RS13375 () | 2705864..2706550 | + | 687 | WP_001574215.1 | type III secretion system effector protease GtgA | - |
| PQP91_RS13380 () | 2706911..2707360 | + | 450 | WP_000798708.1 | hypothetical protein | - |
| PQP91_RS13385 () | 2707734..2708261 | - | 528 | WP_000971762.1 | hypothetical protein | - |
| PQP91_RS13390 () | 2708355..2709044 | - | 690 | WP_001097218.1 | bacteriophage antitermination protein Q | - |
| PQP91_RS13395 () | 2709041..2709177 | - | 137 | Protein_2621 | YlcG family protein | - |
| PQP91_RS13400 () | 2709174..2709314 | - | 141 | Protein_2622 | recombination protein NinG | - |
| PQP91_RS13405 () | 2709398..2709997 | - | 600 | WP_000940753.1 | DUF1367 family protein | - |
| PQP91_RS13410 () | 2710061..2710279 | - | 219 | WP_001524708.1 | hypothetical protein | - |
| PQP91_RS13415 () | 2710581..2710679 | - | 99 | WP_223151200.1 | hypothetical protein | - |
| PQP91_RS13420 () | 2710998..2712977 | - | 1980 | WP_001237395.1 | alkyl sulfatase dimerization domain-containing protein | - |
| PQP91_RS13425 () | 2713374..2714504 | + | 1131 | WP_000529512.1 | GGDEF domain-containing protein | - |
| PQP91_RS13430 () | 2714791..2715186 | - | 396 | WP_000089417.1 | DUF977 family protein | - |
| PQP91_RS13435 () | 2715199..2715741 | - | 543 | WP_158000546.1 | replication protein P | - |
| PQP91_RS13440 () | 2715653..2716651 | - | 999 | WP_000729536.1 | DUF1376 domain-containing protein | - |
| PQP91_RS13445 () | 2716698..2717192 | - | 495 | WP_001574210.1 | toxin YdaT family protein | - |
| PQP91_RS13450 () | 2717179..2717433 | - | 255 | WP_001033912.1 | helix-turn-helix transcriptional regulator | - |
| PQP91_RS13455 () | 2717532..2717930 | + | 399 | WP_001574209.1 | helix-turn-helix domain-containing protein | - |
| PQP91_RS13460 () | 2718372..2718686 | - | 315 | WP_071591195.1 | hypothetical protein | - |
| PQP91_RS13465 () | 2718948..2719223 | + | 276 | WP_000103933.1 | hypothetical protein | - |
| PQP91_RS13470 () | 2719227..2719433 | + | 207 | WP_000682660.1 | cell division inhibitor protein | - |
| PQP91_RS13475 () | 2719509..2719844 | + | 336 | WP_000799627.1 | hypothetical protein | - |
| PQP91_RS13480 () | 2719985..2722675 | + | 2691 | WP_000023732.1 | exodeoxyribonuclease VIII | - |
| PQP91_RS13485 () | 2722668..2723498 | + | 831 | WP_024139186.1 | recombination protein RecT | - |
| PQP91_RS13490 () | 2723545..2723730 | + | 186 | WP_000280163.1 | DUF1187 family protein | - |
| PQP91_RS13495 () | 2723829..2724257 | + | 429 | WP_000743301.1 | hypothetical protein | - |
| PQP91_RS13500 () | 2724318..2724596 | + | 279 | WP_001675651.1 | excisionase | - |
| PQP91_RS13505 () | 2724571..2725650 | + | 1080 | WP_000087638.1 | hypothetical protein ; Integrase | Integrase |
| - | 2725788..2725933 | + | 146 | - | - | Antitoxin Detail |
| - | 2725790..2725893 | - | 104 | - | - | Toxin Detail |
| PQP91_RS13510 () | 2726033..2726386 | - | 354 | WP_000722368.1 | YebY family protein | - |
| PQP91_RS13515 () | 2726403..2727278 | - | 876 | WP_000979703.1 | copper homeostasis membrane protein CopD | - |
| PQP91_RS13520 () | 2727279..2727653 | - | 375 | WP_001751617.1 | CopC domain-containing protein YobA | - |
| PQP91_RS13525 () | 2727791..2728021 | + | 231 | WP_000856224.1 | DNA polymerase III subunit theta | - |
| PQP91_RS13530 () | 2728129..2728785 | + | 657 | WP_000100257.1 | carbon-nitrogen hydrolase family protein | - |
| PQP91_RS13535 () | 2728809..2729507 | + | 699 | WP_000944287.1 | exodeoxyribonuclease X | - |
| PQP91_RS13540 () | 2729544..2731595 | - | 2052 | WP_000936999.1 | oligopeptidase B | - |
| PQP91_RS13545 () | 2731808..2732467 | - | 660 | WP_000024709.1 | tellurite resistance TerB family protein | - |
| PQP91_RS13550 () | 2732561..2732914 | - | 354 | WP_001042123.1 | protein YebF | - |
| PQP91_RS13555 () | 2732982..2733272 | - | 291 | WP_000257723.1 | DNA damage-inducible protein YebG | - |
| PQP91_RS13560 () | 2733403..2734581 | + | 1179 | WP_000173430.1 | formate-dependent phosphoribosylglycinamide formyltransferase | - |
| PQP91_RS13565 () | 2734681..2735322 | - | 642 | WP_000800494.1 | bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase | - |
| PQP91_RS13570 () | 2735360..2737171 | - | 1812 | WP_001069124.1 | phosphogluconate dehydratase | - |
| PQP91_RS13575 () | 2737406..2738881 | - | 1476 | WP_000301704.1 | glucose-6-phosphate dehydrogenase | - |
| PQP91_RS13580 () | 2739223..2740092 | + | 870 | WP_001056720.1 | MurR/RpiR family transcriptional regulator | - |
| PQP91_RS13585 () | 2740216..2741658 | + | 1443 | WP_000091156.1 | pyruvate kinase | - |
| PQP91_RS13590 () | 2741731..2742702 | - | 972 | WP_000448401.1 | Lipid A biosynthesis myristoyltransferase | VF |
| PQP91_RS13595 () | 2742819..2744138 | - | 1320 | WP_001184028.1 | murein DD-endopeptidase MepM | - |
| PQP91_RS13600 () | 2744154..2745098 | - | 945 | WP_000939597.1 | zinc ABC transporter substrate-binding protein ZnuA | - |
| PQP91_RS13605 () | 2745177..2745932 | + | 756 | WP_000203013.1 | Zinc import ATP-binding protein ZnuC | VF |
| PQP91_RS13610 () | 2745929..2746714 | + | 786 | WP_000571508.1 | High-affinity zinc uptake system membrane protein ZnuB | VF |
| PQP91_RS13615 () | 2746793..2747803 | - | 1011 | WP_000568508.1 | Holliday junction ATP-dependent DNA helicase RuvB | VF |
| PQP91_RS13620 () | 2747812..2748423 | - | 612 | WP_000580335.1 | Holliday junction branch migration protein RuvA | - |
| PQP91_RS13625 () | 2748783..2749475 | - | 693 | WP_001675835.1 | hypothetical protein | - |
| PQP91_RS13630 () | 2749684..2750280 | + | 597 | WP_000716751.1 | YebB family permuted papain-like enzyme | - |
| PQP91_RS13635 () | 2750380..2751876 | - | 1497 | WP_000974701.1 | substrate-binding domain-containing protein | - |
| PQP91_RS13640 () | 2751907..2752428 | - | 522 | WP_000022510.1 | crossover junction endodeoxyribonuclease RuvC | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|