MGE detailed information
MGE type: Genomic_island MGE length: 35712 bp
Accession: NZ_CP117305 Location: 3609259..3644970 Organism: Salmonella enterica subsp. enterica serovar Derby strain RM005 Replicon: chromosome
Accession: NZ_CP117305 Location: 3609259..3644970 Organism: Salmonella enterica subsp. enterica serovar Derby strain RM005 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PQP92_RS17575 () | 3604815..3607259 | + | 2445 | WP_023209690.1 | acyl-CoA dehydrogenase FadE | - |
| PQP92_RS17580 () | 3607368..3608135 | + | 768 | WP_000015789.1 | amidohydrolase | - |
| PQP92_RS17585 () | 3608506..3608913 | + | 408 | WP_000788200.1 | Spy/CpxP family protein refolding chaperone | - |
| PQP92_RS17590 () | 3609259..3609978 | + | 720 | WP_000787603.1 | Outer membrane protein PagN | VF |
| PQP92_RS17595 () | 3609982..3610196 | - | 215 | Protein_3443 | hypothetical protein | - |
| PQP92_RS17600 () | 3610316..3611263 | - | 948 | WP_000970302.1 | LysR family transcriptional regulator | - |
| PQP92_RS17605 () | 3611757..3611997 | - | 241 | Protein_3445 | PerC family transcriptional regulator | - |
| PQP92_RS17610 () | 3612080..3612901 | - | 822 | WP_000119391.1 | polysaccharide deacetylase family protein | - |
| PQP92_RS17615 () | 3613309..3613779 | - | 471 | WP_023231370.1 | AfaD family invasin | - |
| PQP92_RS17620 () | 3613801..3616311 | - | 2511 | WP_023231369.1 | F1 capsule-anchoring protein | VF |
| PQP92_RS17625 () | 3616335..3617075 | - | 741 | WP_000691916.1 | Chaperone protein caf1M | VF |
| PQP92_RS17630 () | 3617150..3617647 | - | 498 | WP_048348967.1 | Saf-pilin pilus formation protein SafA | - |
| PQP92_RS17635 () | 3618396..3619100 | - | 705 | Protein_3451 | integrase core domain-containing protein | - |
| PQP92_RS17640 () | 3619153..3619467 | + | 315 | WP_023892102.1 | SymE family type I addiction module toxin | - |
| PQP92_RS17645 () | 3619534..3619812 | - | 279 | WP_012543321.1 | hypothetical protein | - |
| PQP92_RS17650 () | 3620130..3620597 | - | 468 | WP_023232370.1 | hypothetical protein | - |
| PQP92_RS17655 () | 3621470..3621703 | - | 234 | WP_124741005.1 | hypothetical protein | - |
| - | 3621881..3622293 | - | 413 | - | - | Antitoxin Detail |
| PQP92_RS17660 () | 3622028..3622303 | + | 276 | WP_023232369.1 | SymE family type I addiction module toxin | Toxin Detail |
| PQP92_RS17665 () | 3622360..3622692 | - | 333 | WP_001750702.1 | barstar family protein | - |
| PQP92_RS17670 () | 3622692..3627386 | - | 4695 | WP_223124460.1 | RHS repeat-associated core domain-containing protein | - |
| PQP92_RS17675 () | 3627402..3627860 | - | 459 | WP_000186514.1 | DcrB-related protein | - |
| PQP92_RS17680 () | 3627920..3630154 | - | 2235 | WP_023232367.1 | hypothetical protein | VF |
| PQP92_RS17685 () | 3630550..3631071 | - | 522 | WP_000968384.1 | DUF2778 domain-containing protein | - |
| PQP92_RS17690 () | 3631095..3631511 | - | 417 | WP_001596567.1 | DUF2195 family protein | - |
| PQP92_RS17695 () | 3631508..3631603 | - | 96 | Protein_3463 | cytoplasmic protein | - |
| PQP92_RS17700 () | 3631639..3632100 | - | 462 | WP_001529547.1 | hypothetical protein | - |
| PQP92_RS17705 () | 3632085..3632555 | - | 471 | WP_000528843.1 | glucosaminidase domain-containing protein | - |
| PQP92_RS17710 () | 3632598..3633365 | - | 768 | WP_023232366.1 | TagF domain-containing protein | - |
| PQP92_RS17715 () | 3633365..3637234 | - | 3870 | WP_023232365.1 | hypothetical protein | VF |
| PQP92_RS17720 () | 3637471..3637965 | - | 495 | WP_023216589.1 | T6SS effector amidase Tae4 family protein | - |
| PQP92_RS17725 () | 3637962..3638747 | - | 786 | WP_023232364.1 | Rap1a/Tai family immunity protein | - |
| PQP92_RS17730 () | 3638752..3640056 | - | 1305 | WP_023232363.1 | Peptidoglycan-associated lipoprotein | VF |
| PQP92_RS17735 () | 3640053..3641396 | - | 1344 | WP_000118732.1 | hypothetical protein | VF |
| PQP92_RS17740 () | 3641400..3641936 | - | 537 | WP_023206382.1 | hypothetical protein | VF |
| PQP92_RS17745 () | 3642003..3642488 | - | 486 | WP_000119443.1 | Protein hcp1 | VF |
| PQP92_RS17750 () | 3642631..3643014 | - | 384 | WP_000379146.1 | type VI secretion system amidase immunity protein Tai4 | - |
| PQP92_RS17755 () | 3642999..3643484 | - | 486 | WP_001081550.1 | T6SS effector amidase Tae4 family protein | - |
| PQP92_RS17760 () | 3643527..3643721 | - | 195 | Protein_3476 | type VI secretion system lipoprotein TssJ | - |
| PQP92_RS17765 () | 3643788..3644273 | - | 486 | WP_000312802.1 | Protein hcp1 | VF |
| PQP92_RS17770 () | 3644527..3644859 | - | 333 | WP_014344502.1 | hypothetical protein | - |
| PQP92_RS17775 () | 3644983..3645093 | - | 111 | WP_010988967.1 | BPSL0067 family protein | - |
| PQP92_RS17780 () | 3645156..3646664 | - | 1509 | WP_000013884.1 | type VI secretion system contractile sheath large subunit | - |
| PQP92_RS17785 () | 3646688..3647230 | - | 543 | WP_000996815.1 | type VI secretion system contractile sheath small subunit | - |
| PQP92_RS17790 () | 3647330..3649969 | - | 2640 | WP_023232361.1 | type VI secretion system ATPase TssH | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|