MGE detailed information

MGE type: Integrative_Conjugative_Elements        MGE length: 132824 bp
Accession: NZ_CP117294        Location: 4114299..4247122         Organism: Salmonella enterica subsp. enterica serovar Typhi strain S1       Replicon: chromosome


Gene structure


The 5 kb flanking regions of this MGE are displayed.

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
PRW94_RS20230 (PRW94_20230) 4110098..4111399 + 1302 WP_000637594.1 anaerobic C4-dicarboxylate transporter DcuA -
PRW94_RS20235 (PRW94_20235) 4111520..4111867 + 348 WP_000887832.1 divalent cation tolerance protein CutA -
PRW94_RS20240 (PRW94_20240) 4111843..4113546 + 1704 WP_000068881.1 protein-disulfide reductase DsbD -
PRW94_RS20245 (PRW94_20245) 4113583..4114158 + 576 WP_001188506.1 transcriptional regulator -
PRW94_RS20255 (PRW94_20255) 4114509..4115768 + 1260 WP_000954536.1 Prophage integrase IntS ; Integrase Integrase
PRW94_RS20260 (PRW94_20260) 4116079..4117269 + 1191 WP_000975155.1 SH3 domain-containing protein -
PRW94_RS20265 (PRW94_20265) 4117354..4117623 + 270 Protein_3971 integrase -
PRW94_RS20270 (PRW94_20270) 4118250..4119032 - 783 WP_000511749.1 hypothetical protein ; Integrase Integrase
PRW94_RS20275 (PRW94_20275) 4119302..4119496 + 195 WP_162009227.1 hypothetical protein -
PRW94_RS20280 (PRW94_20280) 4119889..4120110 - 222 WP_000193665.1 helix-turn-helix transcriptional regulator -
PRW94_RS20285 (PRW94_20285) 4120107..4120568 - 462 WP_000246267.1 hypothetical protein -
PRW94_RS20290 (PRW94_20290) 4121115..4122788 + 1674 WP_010989301.1 hypothetical protein -
PRW94_RS20295 (PRW94_20295) 4122869..4125154 + 2286 WP_010989300.1 hypothetical protein -
PRW94_RS20300 (PRW94_20300) 4125458..4125709 + 252 WP_024131240.1 hypothetical protein -
PRW94_RS20305 (PRW94_20305) 4125791..4126243 + 453 WP_000434168.1 hypothetical protein -
PRW94_RS20310 (PRW94_20310) 4126423..4126911 - 489 WP_000622308.1 GNAT family N-acetyltransferase Toxin Detail
PRW94_RS20315 (PRW94_20315) 4126908..4127201 - 294 WP_001143724.1 DUF1778 domain-containing protein Antitoxin Detail
PRW94_RS20320 (PRW94_20320) 4127628..4128641 - 1014 WP_000449622.1 Tyrosine recombinase XerC ; Integrase Integrase
PRW94_RS20325 (PRW94_20325) 4128805..4130394 - 1590 WP_000488995.1 TraI domain-containing protein -
PRW94_RS20330 (PRW94_20330) 4130378..4131889 - 1512 WP_001120833.1 UvrD-helicase domain-containing protein -
PRW94_RS20335 (PRW94_20335) 4132743..4133282 + 540 WP_001210944.1 Vi polysaccharide biosynthesis regulator TviA -
PRW94_RS20340 (PRW94_20340) 4133527..4134804 + 1278 WP_000466893.1 UDP-N-acetyl-D-glucosamine 6-dehydrogenase VF
PRW94_RS20345 (PRW94_20345) 4134807..4135853 + 1047 WP_000127915.1 UDP-N-acetylglucosamine 4-epimerase VF
PRW94_RS20350 (PRW94_20350) 4135877..4138372 + 2496 WP_072078180.1 hypothetical protein VF
PRW94_RS20355 (PRW94_20355) 4138372..4140108 + 1737 WP_000632616.1 hypothetical protein VF
PRW94_RS20360 (PRW94_20360) 4140153..4141220 + 1068 WP_000720235.1 hypothetical protein VF
PRW94_RS20365 (PRW94_20365) 4141230..4142024 + 795 WP_001023498.1 hypothetical protein VF
PRW94_RS20370 (PRW94_20370) 4142050..4142745 + 696 WP_000467404.1 Polysialic acid transport ATP-binding protein KpsT VF
PRW94_RS20375 (PRW94_20375) 4142768..4144072 + 1305 WP_000431675.1 hypothetical protein VF
PRW94_RS20380 (PRW94_20380) 4144092..4146062 + 1971 WP_000052242.1 hypothetical protein VF
PRW94_RS20385 (PRW94_20385) 4146364..4147110 - 747 WP_000354257.1 class I SAM-dependent methyltransferase -
PRW94_RS20390 (PRW94_20390) 4147110..4148000 - 891 WP_001681808.1 class I SAM-dependent methyltransferase -
PRW94_RS20395 (PRW94_20395) 4148011..4148268 - 258 WP_001681810.1 YjhX family toxin -
PRW94_RS20400 (PRW94_20400) 4148570..4148680 - 111 Protein_3998 autoinducer 2 ABC transporter substrate-binding protein -
PRW94_RS20405 (PRW94_20405) 4148915..4149259 + 345 Protein_3999 translesion error-prone DNA polymerase V autoproteolytic subunit -
PRW94_RS20410 (PRW94_20410) 4149375..4150400 - 1026 WP_000027757.1 Tyrosine recombinase XerC ; Integrase Integrase
PRW94_RS20415 (PRW94_20415) 4150404..4151036 - 633 WP_000052560.1 helix-turn-helix domain-containing protein -
PRW94_RS20420 (PRW94_20420) 4151153..4151395 + 243 WP_000102106.1 Rha family transcriptional regulator -
PRW94_RS20425 (PRW94_20425) 4151428..4151937 + 510 WP_000460852.1 phage regulatory CII family protein -
PRW94_RS20430 (PRW94_20430) 4151945..4152145 + 201 WP_000956167.1 DUF2724 domain-containing protein -
PRW94_RS20435 (PRW94_20435) 4152109..4152450 + 342 WP_000963478.1 DUF5347 domain-containing protein -
PRW94_RS20440 (PRW94_20440) 4152518..4152751 + 234 WP_001244240.1 DUF2732 family protein -
PRW94_RS20445 (PRW94_20445) 4152751..4152978 + 228 WP_000785510.1 TraR/DksA family transcriptional regulator -
PRW94_RS20450 (PRW94_20450) 4152975..4153559 + 585 WP_001090717.1 exonuclease domain-containing protein -
PRW94_RS20455 (PRW94_20455) 4153556..4154416 + 861 WP_000104130.1 DNA adenine methylase -
PRW94_RS20460 (PRW94_20460) 4154407..4156815 + 2409 WP_000301193.1 replication endonuclease -
PRW94_RS20465 (PRW94_20465) 4156983..4157171 + 189 WP_001154438.1 hypothetical protein -
PRW94_RS20470 (PRW94_20470) 4157183..4157416 + 234 WP_001217561.1 DinI family protein -
PRW94_RS20475 (PRW94_20475) 4157512..4157730 + 219 WP_000835188.1 hypothetical protein -
PRW94_RS20480 (PRW94_20480) 4157740..4158804 + 1065 WP_000829584.1 hypothetical protein -
PRW94_RS20485 (PRW94_20485) 4158801..4159865 + 1065 WP_000789323.1 hypothetical protein -
PRW94_RS20490 (PRW94_20490) 4159885..4160580 + 696 WP_000080839.1 hypothetical protein -
PRW94_RS20495 (PRW94_20495) 4160629..4161672 - 1044 WP_001681813.1 phage portal protein -
PRW94_RS20500 (PRW94_20500) 4161672..4163438 - 1767 WP_001098453.1 terminase ATPase subunit family protein -
PRW94_RS20505 (PRW94_20505) 4163581..4164414 + 834 WP_000216272.1 GPO family capsid scaffolding protein -
PRW94_RS20510 (PRW94_20510) 4164431..4165495 + 1065 WP_000730751.1 phage major capsid protein, P2 family -
PRW94_RS20515 (PRW94_20515) 4165499..4166149 + 651 WP_000059175.1 terminase endonuclease subunit -
PRW94_RS20520 (PRW94_20520) 4166243..4166707 + 465 WP_000673540.1 head completion/stabilization protein -
PRW94_RS20525 (PRW94_20525) 4166707..4166910 + 204 WP_000868184.1 tail protein X -
PRW94_RS20530 (PRW94_20530) 4166914..4167129 + 216 WP_000171566.1 HP1 family phage holin -
PRW94_RS20535 (PRW94_20535) 4167110..4167619 + 510 WP_001097942.1 lysozyme -
PRW94_RS20540 (PRW94_20540) 4167624..4168001 + 378 WP_000731034.1 DNZ54_00345 family protein -
PRW94_RS20545 (PRW94_20545) 4167998..4168426 + 429 WP_024131238.1 Rz-like lysis system protein LysB -
PRW94_RS20550 (PRW94_20550) 4168311..4168559 + 249 WP_223229656.1 Rz1-like lysis system protein LysC -
PRW94_RS20555 (PRW94_20555) 4168522..4168953 + 432 WP_001039961.1 phage tail protein -
PRW94_RS20560 (PRW94_20560) 4168946..4169392 + 447 WP_000343944.1 phage virion morphogenesis protein -
PRW94_RS20565 (PRW94_20565) 4169461..4170039 + 579 WP_000993749.1 phage baseplate assembly protein V -
PRW94_RS20570 (PRW94_20570) 4170036..4170395 + 360 WP_000177408.1 GPW/gp25 family protein -
PRW94_RS20575 (PRW94_20575) 4170382..4171290 + 909 WP_000268327.1 baseplate assembly protein -
PRW94_RS20580 (PRW94_20580) 4171283..4171888 + 606 WP_001086816.1 phage tail protein I -
PRW94_RS20585 (PRW94_20585) 4171885..4173504 + 1620 WP_000104806.1 phage tail protein -
PRW94_RS20590 (PRW94_20590) 4173511..4173918 + 408 WP_000006337.1 tail fiber assembly protein -
PRW94_RS20595 (PRW94_20595) 4174116..4174838 - 723 WP_000161708.1 Guanine nucleotide exchange factor SopE VF
PRW94_RS20600 (PRW94_20600) 4175049..4175270 + 222 Protein_4038 helix-turn-helix domain-containing protein -
PRW94_RS20605 (PRW94_20605) 4175373..4176545 + 1173 WP_000046101.1 phage tail sheath protein -
PRW94_RS20610 (PRW94_20610) 4176555..4177070 + 516 WP_001207653.1 phage major tail tube protein -
PRW94_RS20615 (PRW94_20615) 4177125..4177427 + 303 WP_001280965.1 phage tail assembly protein -
PRW94_RS20620 (PRW94_20620) 4177442..4177561 + 120 WP_000763315.1 GpE family phage tail protein -
PRW94_RS20625 (PRW94_20625) 4177554..4180334 + 2781 WP_001282813.1 phage tail tape measure protein -
PRW94_RS20630 (PRW94_20630) 4180334..4180819 + 486 WP_000980405.1 phage tail protein -
PRW94_RS20635 (PRW94_20635) 4180816..4181916 + 1101 WP_001011750.1 phage late control D family protein -
PRW94_RS20640 (PRW94_20640) 4181984..4182202 + 219 WP_001775272.1 ogr/Delta-like zinc finger family protein -
PRW94_RS20645 (PRW94_20645) 4182289..4182666 - 378 WP_001039750.1 hypothetical protein -
PRW94_RS20650 (PRW94_20650) 4182800..4182886 + 87 Protein_4048 peptidase -
PRW94_RS20655 (PRW94_20655) 4182886..4184160 + 1275 WP_000457555.1 Y-family DNA polymerase -
PRW94_RS20660 (PRW94_20660) 4184292..4184561 + 270 WP_001222413.1 hypothetical protein -
PRW94_RS20665 (PRW94_20665) 4184661..4184987 - 327 WP_000911568.1 DUF3085 domain-containing protein -
PRW94_RS20670 (PRW94_20670) 4185062..4185961 - 900 WP_000022217.1 hypothetical protein -
PRW94_RS20675 (PRW94_20675) 4186035..4186943 - 909 WP_000881183.1 hypothetical protein -
PRW94_RS20680 (PRW94_20680) 4187015..4188964 - 1950 WP_001097965.1 zincin-like metallopeptidase domain-containing protein -
PRW94_RS20685 (PRW94_20685) 4189053..4189511 - 459 WP_000115421.1 hypothetical protein -
PRW94_RS20690 (PRW94_20690) 4189589..4189885 - 297 WP_000968700.1 hypothetical protein -
PRW94_RS20695 (PRW94_20695) 4189882..4190334 - 453 WP_000979718.1 hypothetical protein -
PRW94_RS20700 (PRW94_20700) 4190352..4190561 - 210 WP_000018145.1 hypothetical protein -
PRW94_RS20705 (PRW94_20705) 4190932..4191312 - 381 WP_001103837.1 hypothetical protein -
PRW94_RS20710 (PRW94_20710) 4191408..4191710 - 303 WP_001020123.1 hypothetical protein -
PRW94_RS20715 (PRW94_20715) 4192434..4193354 - 921 WP_000907593.1 hypothetical protein ; Integrase Integrase
PRW94_RS20720 (PRW94_20720) 4194620..4195162 + 543 WP_010989295.1 DUF1062 domain-containing protein -
PRW94_RS20725 (PRW94_20725) 4195373..4196014 - 642 WP_000502502.1 ParB N-terminal domain-containing protein -
PRW94_RS20730 (PRW94_20730) 4195999..4197246 - 1248 WP_001283066.1 phosphoadenosine phosphosulfate reductase -
PRW94_RS20735 (PRW94_20735) 4197534..4197893 + 360 WP_010989293.1 hypothetical protein -
PRW94_RS20740 (PRW94_20740) 4198117..4198506 + 390 WP_000993574.1 hypothetical protein -
PRW94_RS20745 (PRW94_20745) 4198542..4200047 - 1506 WP_000213770.1 conjugal transfer protein TraG N-terminal domain-containing protein -
PRW94_RS20750 (PRW94_20750) 4200380..4201777 - 1398 WP_014341560.1 integrating conjugative element protein -
PRW94_RS20755 (PRW94_20755) 4201825..4202793 - 969 WP_000838927.1 TIGR03756 family integrating conjugative element protein -
PRW94_RS20760 (PRW94_20760) 4202790..4203182 - 393 WP_000821941.1 TIGR03757 family integrating conjugative element protein -
PRW94_RS20765 (PRW94_20765) 4203337..4203723 - 387 WP_000054770.1 hypothetical protein -
PRW94_RS20770 (PRW94_20770) 4203878..4206594 - 2717 Protein_4072 conjugative transfer ATPase -
PRW94_RS20775 (PRW94_20775) 4206714..4207163 - 450 WP_000244536.1 TIGR03751 family conjugal transfer lipoprotein -
PRW94_RS20780 (PRW94_20780) 4207150..4208628 - 1479 WP_001165842.1 TIGR03752 family integrating conjugative element protein -
PRW94_RS20785 (PRW94_20785) 4208618..4209517 - 900 WP_001240640.1 TIGR03749 family integrating conjugative element protein -
PRW94_RS20790 (PRW94_20790) 4209517..4210170 - 654 WP_000086082.1 TIGR03746 family integrating conjugative element protein -
PRW94_RS20795 (PRW94_20795) 4210167..4210541 - 375 WP_000848326.1 TIGR03750 family conjugal transfer protein -
PRW94_RS20800 (PRW94_20800) 4210551..4210916 - 366 WP_223228898.1 TIGR03745 family integrating conjugative element membrane protein -
PRW94_RS20805 (PRW94_20805) 4210943..4211176 - 234 WP_015899494.1 TIGR03758 family integrating conjugative element protein -
PRW94_RS20810 (PRW94_20810) 4211182..4211436 - 255 WP_000252871.1 RAQPRD family integrative conjugative element protein -
PRW94_RS20815 (PRW94_20815) 4211673..4212431 - 759 WP_010989289.1 TIGR03747 family integrating conjugative element membrane protein -
PRW94_RS20820 (PRW94_20820) 4212428..4214518 - 2091 WP_000071290.1 type IV conjugative transfer system coupling protein TraD -
PRW94_RS20825 (PRW94_20825) 4214538..4215107 - 570 WP_000626967.1 restriction endonuclease -
PRW94_RS20830 (PRW94_20830) 4215117..4215617 - 501 WP_000253629.1 integrating conjugative element protein -
PRW94_RS20835 (PRW94_20835) 4215653..4216339 - 687 WP_000013624.1 hypothetical protein VF
PRW94_RS20840 (PRW94_20840) 4216318..4217004 - 687 WP_223229647.1 TIGR03759 family integrating conjugative element protein -
PRW94_RS20845 (PRW94_20845) 4217077..4217991 - 915 WP_000214158.1 hypothetical protein -
PRW94_RS20850 (PRW94_20850) 4217948..4218310 - 363 WP_001149494.1 hypothetical protein -
PRW94_RS20855 (PRW94_20855) 4218498..4219373 - 876 WP_000994659.1 hypothetical protein -
PRW94_RS20860 (PRW94_20860) 4219585..4220052 - 468 WP_000455463.1 hypothetical protein -
PRW94_RS20865 (PRW94_20865) 4220149..4221300 - 1152 WP_000089603.1 Tyrosine recombinase XerC ; Integrase Integrase
PRW94_RS20870 (PRW94_20870) 4221651..4222955 - 1305 WP_000744277.1 hypothetical protein VF
PRW94_RS20875 (PRW94_20875) 4222952..4223614 - 663 WP_000218698.1 hypothetical protein VF
PRW94_RS20880 (PRW94_20880) 4223611..4224054 - 444 WP_223228896.1 hypothetical protein VF
PRW94_RS20885 (PRW94_20885) 4224097..4224693 - 597 WP_024131234.1 hypothetical protein VF
PRW94_RS20890 (PRW94_20890) 4224732..4225817 - 1086 WP_000074784.1 hypothetical protein VF
PRW94_RS20895 (PRW94_20895) 4225814..4227529 - 1716 WP_001289222.1 hypothetical protein VF
PRW94_RS20900 (PRW94_20900) 4227539..4227919 - 381 WP_014341558.1 hypothetical protein VF
PRW94_RS20905 (PRW94_20905) 4228107..4229393 - 1287 WP_057514394.1 hypothetical protein VF
PRW94_RS20910 (PRW94_20910) 4229395..4229733 - 339 WP_048657783.1 Outer membrane lipoprotein BfpB VF
PRW94_RS20915 (PRW94_20915) 4229699..4230634 - 936 WP_049783585.1 hypothetical protein VF
PRW94_RS20920 (PRW94_20920) 4231105..4231524 - 420 WP_000539682.1 hypothetical protein VF
PRW94_RS20925 (PRW94_20925) 4231527..4232771 - 1245 WP_001095932.1 hypothetical protein VF
PRW94_RS20930 (PRW94_20930) 4232936..4233886 - 951 Protein_4104 ISNCY family transposase ISPlu22 VF
PRW94_RS20935 (PRW94_20935) 4233952..4234488 - 537 WP_000157067.1 single-stranded DNA-binding protein -
PRW94_RS20940 (PRW94_20940) 4234501..4234719 - 219 WP_000958171.1 hypothetical protein -
PRW94_RS20945 (PRW94_20945) 4234800..4235249 - 450 WP_000032521.1 STY4534 family ICE replication protein -
PRW94_RS20950 (PRW94_20950) 4235917..4237911 - 1995 WP_001241572.1 DNA topoisomerase III -
PRW94_RS20955 (PRW94_20955) 4238022..4238798 - 777 WP_001290445.1 TIGR03761 family integrating conjugative element protein -
PRW94_RS20960 (PRW94_20960) 4239387..4240697 - 1311 WP_001194350.1 STY4528 family pathogenicity island replication protein -
PRW94_RS20965 (PRW94_20965) 4240727..4240975 - 249 WP_000377625.1 hypothetical protein -
PRW94_RS20970 (PRW94_20970) 4240975..4241532 - 558 WP_000144322.1 DUF2857 domain-containing protein -
PRW94_RS20975 (PRW94_20975) 4241617..4242339 - 723 WP_001275616.1 DUF2786 domain-containing protein -
PRW94_RS20980 (PRW94_20980) 4242326..4242586 - 261 WP_000838568.1 hypothetical protein -
PRW94_RS20985 (PRW94_20985) 4242800..4244599 - 1800 WP_001029724.1 ParB family protein -
PRW94_RS20990 (PRW94_20990) 4244592..4245956 - 1365 WP_000018529.1 SPI-7-type island replicative DNA helicase -
PRW94_RS20995 (PRW94_20995) 4245953..4246987 - 1035 WP_001195363.1 hypothetical protein VF
PRW94_RS21000 (PRW94_21000) 4247201..4247275 - 75 Protein_4118 helix-turn-helix domain-containing protein -
PRW94_RS21005 (PRW94_21005) 4247655..4247732 + 78 Protein_4119 porin family protein -
PRW94_RS21010 (PRW94_21010) 4247832..4248584 + 753 WP_001785756.1 non-specific acid phosphatase -
PRW94_RS21015 (PRW94_21015) 4248825..4249316 - 492 WP_000626103.1 GNAT family N-acetyltransferase -
PRW94_RS21020 (PRW94_21020) 4249313..4249606 - 294 WP_001110456.1 DUF1778 domain-containing protein -
PRW94_RS21025 (PRW94_21025) 4249923..4250145 + 223 Protein_4123 hypothetical protein -
PRW94_RS21030 (PRW94_21030) 4250411..4251286 + 876 WP_000921674.1 AraC family transcriptional regulator -
PRW94_RS21035 (PRW94_21035) 4251283..4251570 + 288 WP_001269916.1 transcriptional regulator RtsB -
PRW94_RS21040 (PRW94_21040) 4251593..4251809 + 217 Protein_4126 hypothetical protein -

Similar MGE(s)


Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.

Detail Organism MGE type Related TA Genome accession Coordinates Mash
distance