NZ_CP1172934112667..4245583

MGE detailed information

MGE type: Integrative_Conjugative_Elements        MGE length: 132917 bp
Accession: NZ_CP117293        Location: 4112667..4245583         Organism: Salmonella enterica subsp. enterica serovar Typhi strain S2       Replicon: chromosome


Gene structure


The 5 kb flanking regions of this MGE are displayed.

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
PRW95_RS20225 (PRW95_20225) 4108466..4109767 + 1302 WP_000637594.1 anaerobic C4-dicarboxylate transporter DcuA -
PRW95_RS20230 (PRW95_20230) 4109888..4110235 + 348 WP_000887832.1 divalent cation tolerance protein CutA -
PRW95_RS20235 (PRW95_20235) 4110211..4111914 + 1704 WP_000068881.1 protein-disulfide reductase DsbD -
PRW95_RS20240 (PRW95_20240) 4111951..4112526 + 576 WP_001188506.1 transcriptional regulator -
PRW95_RS20250 (PRW95_20250) 4112877..4114136 + 1260 WP_000954536.1 Prophage integrase IntS ; Integrase Integrase
PRW95_RS20255 (PRW95_20255) 4114447..4115730 + 1284 WP_000975154.1 SH3 domain-containing protein -
PRW95_RS20260 (PRW95_20260) 4115815..4116084 + 270 Protein_3970 integrase -
PRW95_RS20265 (PRW95_20265) 4116711..4117493 - 783 WP_000511749.1 hypothetical protein ; Integrase Integrase
PRW95_RS20270 (PRW95_20270) 4117763..4117957 + 195 WP_162009227.1 hypothetical protein -
PRW95_RS20275 (PRW95_20275) 4118350..4118571 - 222 WP_000193665.1 helix-turn-helix transcriptional regulator -
PRW95_RS20280 (PRW95_20280) 4118568..4119029 - 462 WP_000246267.1 hypothetical protein -
PRW95_RS20285 (PRW95_20285) 4119576..4121249 + 1674 WP_010989301.1 hypothetical protein -
PRW95_RS20290 (PRW95_20290) 4121330..4123615 + 2286 WP_010989300.1 hypothetical protein -
PRW95_RS20295 (PRW95_20295) 4123919..4124170 + 252 WP_024131240.1 hypothetical protein -
PRW95_RS20300 (PRW95_20300) 4124252..4124704 + 453 WP_000434168.1 hypothetical protein -
PRW95_RS20305 (PRW95_20305) 4124884..4125372 - 489 WP_000622308.1 GNAT family N-acetyltransferase Toxin Detail
PRW95_RS20310 (PRW95_20310) 4125369..4125662 - 294 WP_001143724.1 DUF1778 domain-containing protein Antitoxin Detail
PRW95_RS20315 (PRW95_20315) 4126089..4127102 - 1014 WP_000449622.1 Tyrosine recombinase XerC ; Integrase Integrase
PRW95_RS20320 (PRW95_20320) 4127266..4128855 - 1590 WP_000488995.1 TraI domain-containing protein -
PRW95_RS20325 (PRW95_20325) 4128839..4130350 - 1512 WP_001120833.1 UvrD-helicase domain-containing protein -
PRW95_RS20330 (PRW95_20330) 4131204..4131743 + 540 WP_001210944.1 Vi polysaccharide biosynthesis regulator TviA -
PRW95_RS20335 (PRW95_20335) 4131988..4133265 + 1278 WP_000466893.1 UDP-N-acetyl-D-glucosamine 6-dehydrogenase VF
PRW95_RS20340 (PRW95_20340) 4133268..4134314 + 1047 WP_000127915.1 UDP-N-acetylglucosamine 4-epimerase VF
PRW95_RS20345 (PRW95_20345) 4134338..4136833 + 2496 WP_072078180.1 hypothetical protein VF
PRW95_RS20350 (PRW95_20350) 4136833..4138569 + 1737 WP_000632616.1 hypothetical protein VF
PRW95_RS20355 (PRW95_20355) 4138614..4139681 + 1068 WP_000720235.1 hypothetical protein VF
PRW95_RS20360 (PRW95_20360) 4139691..4140485 + 795 WP_001023498.1 hypothetical protein VF
PRW95_RS20365 (PRW95_20365) 4140511..4141206 + 696 WP_000467404.1 Polysialic acid transport ATP-binding protein KpsT VF
PRW95_RS20370 (PRW95_20370) 4141229..4142533 + 1305 WP_000431675.1 hypothetical protein VF
PRW95_RS20375 (PRW95_20375) 4142553..4144523 + 1971 WP_000052242.1 hypothetical protein VF
PRW95_RS20380 (PRW95_20380) 4144825..4145571 - 747 WP_000354257.1 class I SAM-dependent methyltransferase -
PRW95_RS20385 (PRW95_20385) 4145571..4146461 - 891 WP_001681808.1 class I SAM-dependent methyltransferase -
PRW95_RS20390 (PRW95_20390) 4146472..4146729 - 258 WP_001681810.1 YjhX family toxin -
PRW95_RS20395 (PRW95_20395) 4147031..4147141 - 111 Protein_3997 autoinducer 2 ABC transporter substrate-binding protein -
PRW95_RS20400 (PRW95_20400) 4147376..4147720 + 345 Protein_3998 translesion error-prone DNA polymerase V autoproteolytic subunit -
PRW95_RS20405 (PRW95_20405) 4147836..4148861 - 1026 WP_000027757.1 Tyrosine recombinase XerC ; Integrase Integrase
PRW95_RS20410 (PRW95_20410) 4148865..4149497 - 633 WP_000052560.1 helix-turn-helix domain-containing protein -
PRW95_RS20415 (PRW95_20415) 4149614..4149856 + 243 WP_000102106.1 Rha family transcriptional regulator -
PRW95_RS20420 (PRW95_20420) 4149889..4150398 + 510 WP_000460852.1 phage regulatory CII family protein -
PRW95_RS20425 (PRW95_20425) 4150406..4150606 + 201 WP_000956167.1 DUF2724 domain-containing protein -
PRW95_RS20430 (PRW95_20430) 4150570..4150911 + 342 WP_000963478.1 DUF5347 domain-containing protein -
PRW95_RS20435 (PRW95_20435) 4150979..4151212 + 234 WP_001244240.1 DUF2732 family protein -
PRW95_RS20440 (PRW95_20440) 4151212..4151439 + 228 WP_000785510.1 TraR/DksA family transcriptional regulator -
PRW95_RS20445 (PRW95_20445) 4151436..4152020 + 585 WP_001090717.1 exonuclease domain-containing protein -
PRW95_RS20450 (PRW95_20450) 4152017..4152877 + 861 WP_000104130.1 DNA adenine methylase -
PRW95_RS20455 (PRW95_20455) 4152868..4155276 + 2409 WP_000301193.1 replication endonuclease -
PRW95_RS20460 (PRW95_20460) 4155444..4155632 + 189 WP_001154438.1 hypothetical protein -
PRW95_RS20465 (PRW95_20465) 4155644..4155877 + 234 WP_001217561.1 DinI family protein -
PRW95_RS20470 (PRW95_20470) 4155973..4156191 + 219 WP_000835188.1 hypothetical protein -
PRW95_RS20475 (PRW95_20475) 4156201..4157265 + 1065 WP_000829584.1 hypothetical protein -
PRW95_RS20480 (PRW95_20480) 4157262..4158326 + 1065 WP_000789323.1 hypothetical protein -
PRW95_RS20485 (PRW95_20485) 4158346..4159041 + 696 WP_000080839.1 hypothetical protein -
PRW95_RS20490 (PRW95_20490) 4159090..4160133 - 1044 WP_001681813.1 phage portal protein -
PRW95_RS20495 (PRW95_20495) 4160133..4161899 - 1767 WP_001098453.1 terminase ATPase subunit family protein -
PRW95_RS20500 (PRW95_20500) 4162042..4162875 + 834 WP_000216272.1 GPO family capsid scaffolding protein -
PRW95_RS20505 (PRW95_20505) 4162892..4163956 + 1065 WP_000730751.1 phage major capsid protein, P2 family -
PRW95_RS20510 (PRW95_20510) 4163960..4164610 + 651 WP_000059175.1 terminase endonuclease subunit -
PRW95_RS20515 (PRW95_20515) 4164704..4165168 + 465 WP_000673540.1 head completion/stabilization protein -
PRW95_RS20520 (PRW95_20520) 4165168..4165371 + 204 WP_000868184.1 tail protein X -
PRW95_RS20525 (PRW95_20525) 4165375..4165590 + 216 WP_000171566.1 HP1 family phage holin -
PRW95_RS20530 (PRW95_20530) 4165571..4166080 + 510 WP_001097942.1 lysozyme -
PRW95_RS20535 (PRW95_20535) 4166085..4166462 + 378 WP_000731034.1 DNZ54_00345 family protein -
PRW95_RS20540 (PRW95_20540) 4166459..4166887 + 429 WP_024131238.1 Rz-like lysis system protein LysB -
PRW95_RS20545 (PRW95_20545) 4166772..4167020 + 249 WP_223229656.1 Rz1-like lysis system protein LysC -
PRW95_RS20550 (PRW95_20550) 4166983..4167414 + 432 WP_001039961.1 phage tail protein -
PRW95_RS20555 (PRW95_20555) 4167407..4167853 + 447 WP_000343944.1 phage virion morphogenesis protein -
PRW95_RS20560 (PRW95_20560) 4167922..4168500 + 579 WP_000993749.1 phage baseplate assembly protein V -
PRW95_RS20565 (PRW95_20565) 4168497..4168856 + 360 WP_000177408.1 GPW/gp25 family protein -
PRW95_RS20570 (PRW95_20570) 4168843..4169751 + 909 WP_000268327.1 baseplate assembly protein -
PRW95_RS20575 (PRW95_20575) 4169744..4170349 + 606 WP_001086816.1 phage tail protein I -
PRW95_RS20580 (PRW95_20580) 4170346..4171965 + 1620 WP_000104806.1 phage tail protein -
PRW95_RS20585 (PRW95_20585) 4171972..4172379 + 408 WP_000006337.1 tail fiber assembly protein -
PRW95_RS20590 (PRW95_20590) 4172577..4173299 - 723 WP_000161708.1 Guanine nucleotide exchange factor SopE VF
PRW95_RS20595 (PRW95_20595) 4173510..4173731 + 222 Protein_4037 helix-turn-helix domain-containing protein -
PRW95_RS20600 (PRW95_20600) 4173834..4175006 + 1173 WP_000046101.1 phage tail sheath protein -
PRW95_RS20605 (PRW95_20605) 4175016..4175531 + 516 WP_001207653.1 phage major tail tube protein -
PRW95_RS20610 (PRW95_20610) 4175586..4175888 + 303 WP_001280965.1 phage tail assembly protein -
PRW95_RS20615 (PRW95_20615) 4175903..4176022 + 120 WP_000763315.1 GpE family phage tail protein -
PRW95_RS20620 (PRW95_20620) 4176015..4178795 + 2781 WP_001282813.1 phage tail tape measure protein -
PRW95_RS20625 (PRW95_20625) 4178795..4179280 + 486 WP_000980405.1 phage tail protein -
PRW95_RS20630 (PRW95_20630) 4179277..4180377 + 1101 WP_001011750.1 phage late control D family protein -
PRW95_RS20635 (PRW95_20635) 4180445..4180663 + 219 WP_001775272.1 ogr/Delta-like zinc finger family protein -
PRW95_RS20640 (PRW95_20640) 4180750..4181127 - 378 WP_001039750.1 hypothetical protein -
PRW95_RS20645 (PRW95_20645) 4181261..4181347 + 87 Protein_4047 peptidase -
PRW95_RS20650 (PRW95_20650) 4181347..4182621 + 1275 WP_000457555.1 Y-family DNA polymerase -
PRW95_RS20655 (PRW95_20655) 4182753..4183022 + 270 WP_001222413.1 hypothetical protein -
PRW95_RS20660 (PRW95_20660) 4183122..4183448 - 327 WP_000911568.1 DUF3085 domain-containing protein -
PRW95_RS20665 (PRW95_20665) 4183523..4184422 - 900 WP_000022217.1 hypothetical protein -
PRW95_RS20670 (PRW95_20670) 4184496..4185404 - 909 WP_000881183.1 hypothetical protein -
PRW95_RS20675 (PRW95_20675) 4185476..4187425 - 1950 WP_001097965.1 zincin-like metallopeptidase domain-containing protein -
PRW95_RS20680 (PRW95_20680) 4187514..4187972 - 459 WP_000115421.1 hypothetical protein -
PRW95_RS20685 (PRW95_20685) 4188050..4188346 - 297 WP_000968700.1 hypothetical protein -
PRW95_RS20690 (PRW95_20690) 4188343..4188795 - 453 WP_000979718.1 hypothetical protein -
PRW95_RS20695 (PRW95_20695) 4188813..4189022 - 210 WP_000018145.1 hypothetical protein -
PRW95_RS20700 (PRW95_20700) 4189393..4189773 - 381 WP_001103837.1 hypothetical protein -
PRW95_RS20705 (PRW95_20705) 4189869..4190171 - 303 WP_001020123.1 hypothetical protein -
PRW95_RS20710 (PRW95_20710) 4190895..4191815 - 921 WP_000907593.1 hypothetical protein ; Integrase Integrase
PRW95_RS20715 (PRW95_20715) 4193081..4193623 + 543 WP_010989295.1 DUF1062 domain-containing protein -
PRW95_RS20720 (PRW95_20720) 4193834..4194475 - 642 WP_000502502.1 ParB N-terminal domain-containing protein -
PRW95_RS20725 (PRW95_20725) 4194460..4195707 - 1248 WP_001283066.1 phosphoadenosine phosphosulfate reductase -
PRW95_RS20730 (PRW95_20730) 4195995..4196354 + 360 WP_010989293.1 hypothetical protein -
PRW95_RS20735 (PRW95_20735) 4196578..4196967 + 390 WP_000993574.1 hypothetical protein -
PRW95_RS20740 (PRW95_20740) 4197003..4198508 - 1506 WP_000213770.1 conjugal transfer protein TraG N-terminal domain-containing protein -
PRW95_RS20745 (PRW95_20745) 4198841..4200238 - 1398 WP_014341560.1 integrating conjugative element protein -
PRW95_RS20750 (PRW95_20750) 4200286..4201254 - 969 WP_000838927.1 TIGR03756 family integrating conjugative element protein -
PRW95_RS20755 (PRW95_20755) 4201251..4201643 - 393 WP_000821941.1 TIGR03757 family integrating conjugative element protein -
PRW95_RS20760 (PRW95_20760) 4201798..4202184 - 387 WP_000054770.1 hypothetical protein -
PRW95_RS20765 (PRW95_20765) 4202339..4205055 - 2717 Protein_4071 conjugative transfer ATPase -
PRW95_RS20770 (PRW95_20770) 4205175..4205624 - 450 WP_000244536.1 TIGR03751 family conjugal transfer lipoprotein -
PRW95_RS20775 (PRW95_20775) 4205611..4207089 - 1479 WP_001165842.1 TIGR03752 family integrating conjugative element protein -
PRW95_RS20780 (PRW95_20780) 4207079..4207978 - 900 WP_001240640.1 TIGR03749 family integrating conjugative element protein -
PRW95_RS20785 (PRW95_20785) 4207978..4208631 - 654 WP_000086082.1 TIGR03746 family integrating conjugative element protein -
PRW95_RS20790 (PRW95_20790) 4208628..4209002 - 375 WP_000848326.1 TIGR03750 family conjugal transfer protein -
PRW95_RS20795 (PRW95_20795) 4209012..4209377 - 366 WP_223228898.1 TIGR03745 family integrating conjugative element membrane protein -
PRW95_RS20800 (PRW95_20800) 4209404..4209637 - 234 WP_015899494.1 TIGR03758 family integrating conjugative element protein -
PRW95_RS20805 (PRW95_20805) 4209643..4209897 - 255 WP_000252871.1 RAQPRD family integrative conjugative element protein -
PRW95_RS20810 (PRW95_20810) 4210134..4210892 - 759 WP_010989289.1 TIGR03747 family integrating conjugative element membrane protein -
PRW95_RS20815 (PRW95_20815) 4210889..4212979 - 2091 WP_000071290.1 type IV conjugative transfer system coupling protein TraD -
PRW95_RS20820 (PRW95_20820) 4212999..4213568 - 570 WP_000626967.1 restriction endonuclease -
PRW95_RS20825 (PRW95_20825) 4213578..4214078 - 501 WP_000253629.1 integrating conjugative element protein -
PRW95_RS20830 (PRW95_20830) 4214114..4214800 - 687 WP_000013624.1 hypothetical protein VF
PRW95_RS20835 (PRW95_20835) 4214779..4215465 - 687 WP_223229647.1 TIGR03759 family integrating conjugative element protein -
PRW95_RS20840 (PRW95_20840) 4215538..4216452 - 915 WP_000214158.1 hypothetical protein -
PRW95_RS20845 (PRW95_20845) 4216409..4216771 - 363 WP_001149494.1 hypothetical protein -
PRW95_RS20850 (PRW95_20850) 4216959..4217834 - 876 WP_000994659.1 hypothetical protein -
PRW95_RS20855 (PRW95_20855) 4218046..4218513 - 468 WP_000455463.1 hypothetical protein -
PRW95_RS20860 (PRW95_20860) 4218610..4219761 - 1152 WP_000089603.1 Tyrosine recombinase XerC ; Integrase Integrase
PRW95_RS20865 (PRW95_20865) 4220112..4221416 - 1305 WP_000744277.1 hypothetical protein VF
PRW95_RS20870 (PRW95_20870) 4221413..4222075 - 663 WP_000218698.1 hypothetical protein VF
PRW95_RS20875 (PRW95_20875) 4222072..4222515 - 444 WP_223228896.1 hypothetical protein VF
PRW95_RS20880 (PRW95_20880) 4222558..4223154 - 597 WP_024131234.1 hypothetical protein VF
PRW95_RS20885 (PRW95_20885) 4223193..4224278 - 1086 WP_000074784.1 hypothetical protein VF
PRW95_RS20890 (PRW95_20890) 4224275..4225990 - 1716 WP_001289222.1 hypothetical protein VF
PRW95_RS20895 (PRW95_20895) 4226000..4226380 - 381 WP_014341558.1 hypothetical protein VF
PRW95_RS20900 (PRW95_20900) 4226568..4227854 - 1287 WP_057514394.1 hypothetical protein VF
PRW95_RS20905 (PRW95_20905) 4227856..4228194 - 339 WP_048657783.1 Outer membrane lipoprotein BfpB VF
PRW95_RS20910 (PRW95_20910) 4228160..4229095 - 936 WP_049783585.1 hypothetical protein VF
PRW95_RS20915 (PRW95_20915) 4229566..4229985 - 420 WP_000539682.1 hypothetical protein VF
PRW95_RS20920 (PRW95_20920) 4229988..4231232 - 1245 WP_001095932.1 hypothetical protein VF
PRW95_RS20925 (PRW95_20925) 4231397..4232347 - 951 Protein_4103 ISNCY family transposase ISPlu22 VF
PRW95_RS20930 (PRW95_20930) 4232413..4232949 - 537 WP_000157067.1 single-stranded DNA-binding protein -
PRW95_RS20935 (PRW95_20935) 4232962..4233180 - 219 WP_000958171.1 hypothetical protein -
PRW95_RS20940 (PRW95_20940) 4233261..4233710 - 450 WP_000032521.1 STY4534 family ICE replication protein -
PRW95_RS20945 (PRW95_20945) 4234378..4236372 - 1995 WP_001241572.1 DNA topoisomerase III -
PRW95_RS20950 (PRW95_20950) 4236483..4237259 - 777 WP_001290445.1 TIGR03761 family integrating conjugative element protein -
PRW95_RS20955 (PRW95_20955) 4237848..4239158 - 1311 WP_001194350.1 STY4528 family pathogenicity island replication protein -
PRW95_RS20960 (PRW95_20960) 4239188..4239436 - 249 WP_000377625.1 hypothetical protein -
PRW95_RS20965 (PRW95_20965) 4239436..4239993 - 558 WP_000144322.1 DUF2857 domain-containing protein -
PRW95_RS20970 (PRW95_20970) 4240078..4240800 - 723 WP_001275616.1 DUF2786 domain-containing protein -
PRW95_RS20975 (PRW95_20975) 4240787..4241047 - 261 WP_000838568.1 hypothetical protein -
PRW95_RS20980 (PRW95_20980) 4241261..4243060 - 1800 WP_001029724.1 ParB family protein -
PRW95_RS20985 (PRW95_20985) 4243053..4244417 - 1365 WP_000018529.1 SPI-7-type island replicative DNA helicase -
PRW95_RS20990 (PRW95_20990) 4244414..4245448 - 1035 WP_001195363.1 hypothetical protein VF
PRW95_RS20995 (PRW95_20995) 4245662..4245736 - 75 Protein_4117 helix-turn-helix domain-containing protein -
PRW95_RS21000 (PRW95_21000) 4246116..4246193 + 78 Protein_4118 porin family protein -
PRW95_RS21005 (PRW95_21005) 4246293..4247045 + 753 WP_001785756.1 non-specific acid phosphatase -
PRW95_RS21010 (PRW95_21010) 4247286..4247777 - 492 WP_000626103.1 GNAT family N-acetyltransferase -
PRW95_RS21015 (PRW95_21015) 4247774..4248067 - 294 WP_001110456.1 DUF1778 domain-containing protein -
PRW95_RS21020 (PRW95_21020) 4248384..4248606 + 223 Protein_4122 hypothetical protein -
PRW95_RS21025 (PRW95_21025) 4248872..4249747 + 876 WP_000921674.1 AraC family transcriptional regulator -
PRW95_RS21030 (PRW95_21030) 4249744..4250031 + 288 WP_001269916.1 transcriptional regulator RtsB -
PRW95_RS21035 (PRW95_21035) 4250054..4250270 + 217 Protein_4125 hypothetical protein -

Similar MGE(s)


Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.

Detail Organism MGE type Related TA Genome accession Coordinates Mash
distance