NZ_CP1172904111057..4243973

MGE detailed information

MGE type: Integrative_Conjugative_Elements        MGE length: 132917 bp
Accession: NZ_CP117290        Location: 4111057..4243973         Organism: Salmonella enterica subsp. enterica serovar Typhi strain S6       Replicon: chromosome


Gene structure


The 5 kb flanking regions of this MGE are displayed.

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
PRW98_RS20220 (PRW98_20220) 4106856..4108157 + 1302 WP_000637594.1 anaerobic C4-dicarboxylate transporter DcuA -
PRW98_RS20225 (PRW98_20225) 4108278..4108625 + 348 WP_000887832.1 divalent cation tolerance protein CutA -
PRW98_RS20230 (PRW98_20230) 4108601..4110304 + 1704 WP_000068881.1 protein-disulfide reductase DsbD -
PRW98_RS20235 (PRW98_20235) 4110341..4110916 + 576 WP_001188506.1 transcriptional regulator -
PRW98_RS20245 (PRW98_20245) 4111267..4112526 + 1260 WP_000954536.1 hypothetical protein ; Integrase Integrase
PRW98_RS20250 (PRW98_20250) 4112837..4114120 + 1284 WP_000975154.1 SH3 domain-containing protein -
PRW98_RS20255 (PRW98_20255) 4114205..4114474 + 270 Protein_3968 integrase -
PRW98_RS20260 (PRW98_20260) 4115101..4115883 - 783 WP_000511749.1 hypothetical protein ; Integrase Integrase
PRW98_RS20265 (PRW98_20265) 4116153..4116347 + 195 WP_162009227.1 hypothetical protein -
PRW98_RS20270 (PRW98_20270) 4116740..4116961 - 222 WP_000193665.1 helix-turn-helix transcriptional regulator -
PRW98_RS20275 (PRW98_20275) 4116958..4117419 - 462 WP_000246267.1 hypothetical protein -
PRW98_RS20280 (PRW98_20280) 4117966..4119639 + 1674 WP_010989301.1 hypothetical protein -
PRW98_RS20285 (PRW98_20285) 4119720..4122005 + 2286 WP_010989300.1 hypothetical protein -
PRW98_RS20290 (PRW98_20290) 4122309..4122560 + 252 WP_024131240.1 hypothetical protein -
PRW98_RS20295 (PRW98_20295) 4122642..4123094 + 453 WP_000434168.1 hypothetical protein -
PRW98_RS20300 (PRW98_20300) 4123274..4123762 - 489 WP_000622308.1 GNAT family N-acetyltransferase Toxin Detail
PRW98_RS20305 (PRW98_20305) 4123759..4124052 - 294 WP_001143724.1 DUF1778 domain-containing protein Antitoxin Detail
PRW98_RS20310 (PRW98_20310) 4124479..4125492 - 1014 WP_000449622.1 hypothetical protein ; Integrase Integrase
PRW98_RS20315 (PRW98_20315) 4125656..4127245 - 1590 WP_000488995.1 TraI domain-containing protein -
PRW98_RS20320 (PRW98_20320) 4127229..4128740 - 1512 WP_001120833.1 UvrD-helicase domain-containing protein -
PRW98_RS20325 (PRW98_20325) 4129594..4130133 + 540 WP_001210944.1 Vi polysaccharide biosynthesis regulator TviA -
PRW98_RS20330 (PRW98_20330) 4130378..4131655 + 1278 WP_000466893.1 hypothetical protein VF
PRW98_RS20335 (PRW98_20335) 4131658..4132704 + 1047 WP_000127915.1 hypothetical protein VF
PRW98_RS20340 (PRW98_20340) 4132728..4135223 + 2496 WP_072078180.1 hypothetical protein VF
PRW98_RS20345 (PRW98_20345) 4135223..4136959 + 1737 WP_000632616.1 hypothetical protein VF
PRW98_RS20350 (PRW98_20350) 4137004..4138071 + 1068 WP_000720235.1 hypothetical protein VF
PRW98_RS20355 (PRW98_20355) 4138081..4138875 + 795 WP_001023498.1 hypothetical protein VF
PRW98_RS20360 (PRW98_20360) 4138901..4139596 + 696 WP_000467404.1 hypothetical protein VF
PRW98_RS20365 (PRW98_20365) 4139619..4140923 + 1305 WP_000431675.1 hypothetical protein VF
PRW98_RS20370 (PRW98_20370) 4140943..4142913 + 1971 WP_000052242.1 hypothetical protein VF
PRW98_RS20375 (PRW98_20375) 4143215..4143961 - 747 WP_000354257.1 class I SAM-dependent methyltransferase -
PRW98_RS20380 (PRW98_20380) 4143961..4144851 - 891 WP_001681808.1 class I SAM-dependent methyltransferase -
PRW98_RS20385 (PRW98_20385) 4144862..4145119 - 258 WP_001681810.1 YjhX family toxin -
PRW98_RS20390 (PRW98_20390) 4145421..4145531 - 111 Protein_3995 autoinducer 2 ABC transporter substrate-binding protein -
PRW98_RS20395 (PRW98_20395) 4145766..4146110 + 345 Protein_3996 translesion error-prone DNA polymerase V autoproteolytic subunit -
PRW98_RS20400 (PRW98_20400) 4146226..4147251 - 1026 WP_000027757.1 hypothetical protein ; Integrase Integrase
PRW98_RS20405 (PRW98_20405) 4147255..4147887 - 633 WP_000052560.1 helix-turn-helix domain-containing protein -
PRW98_RS20410 (PRW98_20410) 4148004..4148246 + 243 WP_000102106.1 Rha family transcriptional regulator -
PRW98_RS20415 (PRW98_20415) 4148279..4148788 + 510 WP_000460852.1 phage regulatory CII family protein -
PRW98_RS20420 (PRW98_20420) 4148796..4148996 + 201 WP_000956167.1 DUF2724 domain-containing protein -
PRW98_RS20425 (PRW98_20425) 4148960..4149301 + 342 WP_000963478.1 DUF5347 domain-containing protein -
PRW98_RS20430 (PRW98_20430) 4149369..4149602 + 234 WP_001244240.1 DUF2732 family protein -
PRW98_RS20435 (PRW98_20435) 4149602..4149829 + 228 WP_000785510.1 TraR/DksA family transcriptional regulator -
PRW98_RS20440 (PRW98_20440) 4149826..4150410 + 585 WP_001090717.1 exonuclease domain-containing protein -
PRW98_RS20445 (PRW98_20445) 4150407..4151267 + 861 WP_000104130.1 DNA adenine methylase -
PRW98_RS20450 (PRW98_20450) 4151258..4153666 + 2409 WP_000301193.1 replication endonuclease -
PRW98_RS20455 (PRW98_20455) 4153834..4154022 + 189 WP_001154438.1 hypothetical protein -
PRW98_RS20460 (PRW98_20460) 4154034..4154267 + 234 WP_001217561.1 DinI family protein -
PRW98_RS20465 (PRW98_20465) 4154363..4154581 + 219 WP_000835188.1 hypothetical protein -
PRW98_RS20470 (PRW98_20470) 4154591..4155655 + 1065 WP_000829584.1 hypothetical protein -
PRW98_RS20475 (PRW98_20475) 4155652..4156716 + 1065 WP_000789323.1 hypothetical protein -
PRW98_RS20480 (PRW98_20480) 4156736..4157431 + 696 WP_000080839.1 hypothetical protein -
PRW98_RS20485 (PRW98_20485) 4157480..4158523 - 1044 WP_001681813.1 phage portal protein -
PRW98_RS20490 (PRW98_20490) 4158523..4160289 - 1767 WP_001098453.1 terminase ATPase subunit family protein -
PRW98_RS20495 (PRW98_20495) 4160432..4161265 + 834 WP_000216272.1 GPO family capsid scaffolding protein -
PRW98_RS20500 (PRW98_20500) 4161282..4162346 + 1065 WP_000730751.1 phage major capsid protein, P2 family -
PRW98_RS20505 (PRW98_20505) 4162350..4163000 + 651 WP_000059175.1 terminase endonuclease subunit -
PRW98_RS20510 (PRW98_20510) 4163094..4163558 + 465 WP_000673540.1 head completion/stabilization protein -
PRW98_RS20515 (PRW98_20515) 4163558..4163761 + 204 WP_000868184.1 tail protein X -
PRW98_RS20520 (PRW98_20520) 4163765..4163980 + 216 WP_000171566.1 HP1 family phage holin -
PRW98_RS20525 (PRW98_20525) 4163961..4164470 + 510 WP_001097942.1 lysozyme -
PRW98_RS20530 (PRW98_20530) 4164475..4164852 + 378 WP_000731034.1 DNZ54_00345 family protein -
PRW98_RS20535 (PRW98_20535) 4164849..4165277 + 429 WP_024131238.1 Rz-like lysis system protein LysB -
PRW98_RS20540 (PRW98_20540) 4165162..4165410 + 249 WP_223229656.1 Rz1-like lysis system protein LysC -
PRW98_RS20545 (PRW98_20545) 4165373..4165804 + 432 WP_001039961.1 phage tail protein -
PRW98_RS20550 (PRW98_20550) 4165797..4166243 + 447 WP_000343944.1 phage virion morphogenesis protein -
PRW98_RS20555 (PRW98_20555) 4166312..4166890 + 579 WP_000993749.1 phage baseplate assembly protein V -
PRW98_RS20560 (PRW98_20560) 4166887..4167246 + 360 WP_000177408.1 GPW/gp25 family protein -
PRW98_RS20565 (PRW98_20565) 4167233..4168141 + 909 WP_000268327.1 baseplate assembly protein -
PRW98_RS20570 (PRW98_20570) 4168134..4168739 + 606 WP_001086816.1 phage tail protein I -
PRW98_RS20575 (PRW98_20575) 4168736..4170355 + 1620 WP_000104806.1 phage tail protein -
PRW98_RS20580 (PRW98_20580) 4170362..4170769 + 408 WP_000006337.1 tail fiber assembly protein -
PRW98_RS20585 (PRW98_20585) 4170967..4171689 - 723 WP_000161708.1 hypothetical protein VF
PRW98_RS20590 (PRW98_20590) 4171900..4172121 + 222 Protein_4035 helix-turn-helix domain-containing protein -
PRW98_RS20595 (PRW98_20595) 4172224..4173396 + 1173 WP_000046101.1 phage tail sheath protein -
PRW98_RS20600 (PRW98_20600) 4173406..4173921 + 516 WP_001207653.1 phage major tail tube protein -
PRW98_RS20605 (PRW98_20605) 4173976..4174278 + 303 WP_001280965.1 phage tail assembly protein -
PRW98_RS20610 (PRW98_20610) 4174293..4174412 + 120 WP_000763315.1 GpE family phage tail protein -
PRW98_RS20615 (PRW98_20615) 4174405..4177185 + 2781 WP_001282813.1 phage tail tape measure protein -
PRW98_RS20620 (PRW98_20620) 4177185..4177670 + 486 WP_000980405.1 phage tail protein -
PRW98_RS20625 (PRW98_20625) 4177667..4178767 + 1101 WP_001011750.1 phage late control D family protein -
PRW98_RS20630 (PRW98_20630) 4178835..4179053 + 219 WP_001775272.1 ogr/Delta-like zinc finger family protein -
PRW98_RS20635 (PRW98_20635) 4179140..4179517 - 378 WP_001039750.1 hypothetical protein -
PRW98_RS20640 (PRW98_20640) 4179651..4179737 + 87 Protein_4045 peptidase -
PRW98_RS20645 (PRW98_20645) 4179737..4181011 + 1275 WP_000457555.1 Y-family DNA polymerase -
PRW98_RS20650 (PRW98_20650) 4181143..4181412 + 270 WP_001222413.1 hypothetical protein -
PRW98_RS20655 (PRW98_20655) 4181512..4181838 - 327 WP_000911568.1 DUF3085 domain-containing protein -
PRW98_RS20660 (PRW98_20660) 4181913..4182812 - 900 WP_000022217.1 hypothetical protein -
PRW98_RS20665 (PRW98_20665) 4182886..4183794 - 909 WP_000881183.1 hypothetical protein -
PRW98_RS20670 (PRW98_20670) 4183866..4185815 - 1950 WP_001097965.1 zincin-like metallopeptidase domain-containing protein -
PRW98_RS20675 (PRW98_20675) 4185904..4186362 - 459 WP_000115421.1 hypothetical protein -
PRW98_RS20680 (PRW98_20680) 4186440..4186736 - 297 WP_000968700.1 hypothetical protein -
PRW98_RS20685 (PRW98_20685) 4186733..4187185 - 453 WP_000979718.1 hypothetical protein -
PRW98_RS20690 (PRW98_20690) 4187203..4187412 - 210 WP_000018145.1 hypothetical protein -
PRW98_RS20695 (PRW98_20695) 4187783..4188163 - 381 WP_001103837.1 hypothetical protein -
PRW98_RS20700 (PRW98_20700) 4188259..4188561 - 303 WP_001020123.1 hypothetical protein -
PRW98_RS20705 (PRW98_20705) 4189285..4190205 - 921 WP_000907593.1 hypothetical protein ; Integrase Integrase
PRW98_RS20710 (PRW98_20710) 4191471..4192013 + 543 WP_010989295.1 DUF1062 domain-containing protein -
PRW98_RS20715 (PRW98_20715) 4192224..4192865 - 642 WP_000502502.1 ParB N-terminal domain-containing protein -
PRW98_RS20720 (PRW98_20720) 4192850..4194097 - 1248 WP_001283066.1 phosphoadenosine phosphosulfate reductase -
PRW98_RS20725 (PRW98_20725) 4194385..4194744 + 360 WP_010989293.1 hypothetical protein -
PRW98_RS20730 (PRW98_20730) 4194968..4195357 + 390 WP_000993574.1 hypothetical protein -
PRW98_RS20735 (PRW98_20735) 4195393..4196898 - 1506 WP_000213770.1 conjugal transfer protein TraG N-terminal domain-containing protein -
PRW98_RS20740 (PRW98_20740) 4197231..4198628 - 1398 WP_014341560.1 integrating conjugative element protein -
PRW98_RS20745 (PRW98_20745) 4198676..4199644 - 969 WP_000838927.1 TIGR03756 family integrating conjugative element protein -
PRW98_RS20750 (PRW98_20750) 4199641..4200033 - 393 WP_000821941.1 TIGR03757 family integrating conjugative element protein -
PRW98_RS20755 (PRW98_20755) 4200188..4200574 - 387 WP_000054770.1 hypothetical protein -
PRW98_RS20760 (PRW98_20760) 4200729..4203445 - 2717 Protein_4069 conjugative transfer ATPase -
PRW98_RS20765 (PRW98_20765) 4203565..4204014 - 450 WP_000244536.1 TIGR03751 family conjugal transfer lipoprotein -
PRW98_RS20770 (PRW98_20770) 4204001..4205479 - 1479 WP_001165842.1 TIGR03752 family integrating conjugative element protein -
PRW98_RS20775 (PRW98_20775) 4205469..4206368 - 900 WP_001240640.1 TIGR03749 family integrating conjugative element protein -
PRW98_RS20780 (PRW98_20780) 4206368..4207021 - 654 WP_000086082.1 TIGR03746 family integrating conjugative element protein -
PRW98_RS20785 (PRW98_20785) 4207018..4207392 - 375 WP_000848326.1 TIGR03750 family conjugal transfer protein -
PRW98_RS20790 (PRW98_20790) 4207402..4207767 - 366 WP_223228898.1 TIGR03745 family integrating conjugative element membrane protein -
PRW98_RS20795 (PRW98_20795) 4207794..4208027 - 234 WP_015899494.1 TIGR03758 family integrating conjugative element protein -
PRW98_RS20800 (PRW98_20800) 4208033..4208287 - 255 WP_000252871.1 RAQPRD family integrative conjugative element protein -
PRW98_RS20805 (PRW98_20805) 4208524..4209282 - 759 WP_010989289.1 TIGR03747 family integrating conjugative element membrane protein -
PRW98_RS20810 (PRW98_20810) 4209279..4211369 - 2091 WP_000071290.1 type IV conjugative transfer system coupling protein TraD -
PRW98_RS20815 (PRW98_20815) 4211389..4211958 - 570 WP_000626967.1 restriction endonuclease -
PRW98_RS20820 (PRW98_20820) 4211968..4212468 - 501 WP_000253629.1 integrating conjugative element protein -
PRW98_RS20825 (PRW98_20825) 4212504..4213190 - 687 WP_000013624.1 hypothetical protein VF
PRW98_RS20830 (PRW98_20830) 4213169..4213855 - 687 WP_223229647.1 TIGR03759 family integrating conjugative element protein -
PRW98_RS20835 (PRW98_20835) 4213928..4214842 - 915 WP_000214158.1 hypothetical protein -
PRW98_RS20840 (PRW98_20840) 4214799..4215161 - 363 WP_001149494.1 hypothetical protein -
PRW98_RS20845 (PRW98_20845) 4215349..4216224 - 876 WP_000994659.1 hypothetical protein -
PRW98_RS20850 (PRW98_20850) 4216436..4216903 - 468 WP_000455463.1 hypothetical protein -
PRW98_RS20855 (PRW98_20855) 4217000..4218151 - 1152 WP_000089603.1 hypothetical protein ; Integrase Integrase
PRW98_RS20860 (PRW98_20860) 4218499..4219806 - 1308 WP_000744276.1 hypothetical protein VF
PRW98_RS20865 (PRW98_20865) 4219803..4220465 - 663 WP_000218698.1 hypothetical protein VF
PRW98_RS20870 (PRW98_20870) 4220462..4220905 - 444 WP_223228896.1 hypothetical protein VF
PRW98_RS20875 (PRW98_20875) 4220948..4221544 - 597 WP_024131234.1 hypothetical protein VF
PRW98_RS20880 (PRW98_20880) 4221583..4222668 - 1086 WP_000074784.1 hypothetical protein VF
PRW98_RS20885 (PRW98_20885) 4222665..4224380 - 1716 WP_001289222.1 hypothetical protein VF
PRW98_RS20890 (PRW98_20890) 4224390..4224770 - 381 WP_014341558.1 hypothetical protein VF
PRW98_RS20895 (PRW98_20895) 4224958..4226244 - 1287 WP_057514394.1 hypothetical protein VF
PRW98_RS20900 (PRW98_20900) 4226246..4226584 - 339 WP_048657783.1 hypothetical protein VF
PRW98_RS20905 (PRW98_20905) 4226550..4227485 - 936 WP_049783585.1 hypothetical protein VF
PRW98_RS20910 (PRW98_20910) 4227956..4228375 - 420 WP_000539682.1 hypothetical protein VF
PRW98_RS20915 (PRW98_20915) 4228378..4229622 - 1245 WP_001095932.1 hypothetical protein VF
PRW98_RS20920 (PRW98_20920) 4229787..4230737 - 951 Protein_4101 hypothetical protein VF
PRW98_RS20925 (PRW98_20925) 4230803..4231339 - 537 WP_000157067.1 single-stranded DNA-binding protein -
PRW98_RS20930 (PRW98_20930) 4231352..4231570 - 219 WP_000958171.1 hypothetical protein -
PRW98_RS20935 (PRW98_20935) 4231651..4232100 - 450 WP_000032521.1 STY4534 family ICE replication protein -
PRW98_RS20940 (PRW98_20940) 4232768..4234762 - 1995 WP_001241572.1 DNA topoisomerase III -
PRW98_RS20945 (PRW98_20945) 4234873..4235649 - 777 WP_001290445.1 TIGR03761 family integrating conjugative element protein -
PRW98_RS20950 (PRW98_20950) 4236238..4237548 - 1311 WP_001194350.1 STY4528 family pathogenicity island replication protein -
PRW98_RS20955 (PRW98_20955) 4237578..4237826 - 249 WP_000377625.1 hypothetical protein -
PRW98_RS20960 (PRW98_20960) 4237826..4238383 - 558 WP_000144322.1 DUF2857 domain-containing protein -
PRW98_RS20965 (PRW98_20965) 4238468..4239190 - 723 WP_001275616.1 DUF2786 domain-containing protein -
PRW98_RS20970 (PRW98_20970) 4239177..4239437 - 261 WP_000838568.1 hypothetical protein -
PRW98_RS20975 (PRW98_20975) 4239651..4241450 - 1800 WP_001029724.1 ParB family protein -
PRW98_RS20980 (PRW98_20980) 4241443..4242807 - 1365 WP_000018529.1 SPI-7-type island replicative DNA helicase -
PRW98_RS20985 (PRW98_20985) 4242804..4243838 - 1035 WP_001195363.1 hypothetical protein VF
PRW98_RS20990 (PRW98_20990) 4244052..4244126 - 75 Protein_4115 helix-turn-helix domain-containing protein -
PRW98_RS20995 (PRW98_20995) 4244506..4244583 + 78 Protein_4116 porin family protein -
PRW98_RS21000 (PRW98_21000) 4244683..4245435 + 753 WP_001785756.1 non-specific acid phosphatase -
PRW98_RS21005 (PRW98_21005) 4245676..4246167 - 492 WP_000626103.1 GNAT family N-acetyltransferase -
PRW98_RS21010 (PRW98_21010) 4246164..4246457 - 294 WP_001110456.1 DUF1778 domain-containing protein -
PRW98_RS21015 (PRW98_21015) 4246774..4246996 + 223 Protein_4120 hypothetical protein -
PRW98_RS21020 (PRW98_21020) 4247262..4248137 + 876 WP_000921674.1 AraC family transcriptional regulator -
PRW98_RS21025 (PRW98_21025) 4248134..4248421 + 288 WP_001269916.1 transcriptional regulator RtsB -
PRW98_RS21030 (PRW98_21030) 4248444..4248660 + 217 Protein_4123 hypothetical protein -

Similar MGE(s)


Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.

Detail Organism MGE type Related TA Genome accession Coordinates Mash
distance