MGE detailed information
MGE type: Genomic_island MGE length: 30715 bp
Accession: NZ_CP116239 Location: 914390..945104 Organism: Pseudomonas sp. TUM22785 Replicon: chromosome
Accession: NZ_CP116239 Location: 914390..945104 Organism: Pseudomonas sp. TUM22785 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PI990_RS04270 (PI990_04270) | 909692..911050 | + | 1359 | WP_271659919.1 | adenylate synthase | - |
| PI990_RS04275 (PI990_04275) | 911038..912192 | + | 1155 | WP_271659920.1 | ATP-grasp domain-containing protein | - |
| PI990_RS04280 (PI990_04280) | 912189..913328 | + | 1140 | WP_271659921.1 | hypothetical protein | - |
| PI990_RS04285 (PI990_04285) | 913325..914326 | + | 1002 | WP_271659922.1 | aromatic ring-hydroxylating dioxygenase subunit alpha | - |
| PI990_RS04290 (PI990_04290) | 914390..914761 | - | 372 | WP_271659923.1 | DUF3592 domain-containing protein | - |
| PI990_RS04295 (PI990_04295) | 914947..915621 | - | 675 | WP_034019461.1 | hypothetical protein | - |
| PI990_RS04300 (PI990_04300) | 915856..917160 | + | 1305 | WP_271659924.1 | hypothetical protein | - |
| PI990_RS04305 (PI990_04305) | 917230..917460 | + | 231 | WP_034019465.1 | AlpA family transcriptional regulator | - |
| PI990_RS04310 (PI990_04310) | 917938..918663 | + | 726 | WP_271659925.1 | inovirus Gp2 family protein | - |
| PI990_RS04315 (PI990_04315) | 918667..918738 | - | 72 | WP_232961653.1 | DUF4113 domain-containing protein | - |
| PI990_RS04320 (PI990_04320) | 918935..919288 | + | 354 | Protein_852 | DNA methylase | - |
| PI990_RS04325 (PI990_04325) | 919420..920796 | - | 1377 | WP_012018612.1 | Sensor histidine kinase CusS | VF |
| PI990_RS04330 (PI990_04330) | 920799..921476 | - | 678 | WP_004374688.1 | Transcriptional activator protein CopR | VF |
| PI990_RS04335 (PI990_04335) | 921683..922042 | + | 360 | WP_003246763.1 | co-regulatory protein PtrA N-terminal domain-containing protein | - |
| PI990_RS04340 (PI990_04340) | 922209..922766 | + | 558 | WP_003139550.1 | plastocyanin/azurin family copper-binding protein | - |
| PI990_RS04345 (PI990_04345) | 922914..923447 | + | 534 | WP_003246762.1 | cupredoxin family protein | - |
| PI990_RS04350 (PI990_04350) | 923527..923775 | + | 249 | WP_003246761.1 | DUF2933 domain-containing protein | - |
| PI990_RS04355 (PI990_04355) | 923781..926144 | + | 2364 | WP_172979187.1 | heavy metal translocating P-type ATPase | - |
| PI990_RS04360 (PI990_04360) | 926322..926522 | + | 201 | WP_003246756.1 | heavy metal-associated domain-containing protein | - |
| PI990_RS04365 (PI990_04365) | 926542..926856 | - | 315 | WP_004374672.1 | hypothetical protein | - |
| PI990_RS04370 (PI990_04370) | 926907..927701 | - | 795 | WP_003246754.1 | DNA-binding domain-containing protein | - |
| PI990_RS04375 (PI990_04375) | 927698..928534 | - | 837 | WP_004374664.1 | DUF692 domain-containing protein | - |
| PI990_RS04380 (PI990_04380) | 928579..928839 | - | 261 | WP_003460126.1 | membrane protein | - |
| PI990_RS04385 (PI990_04385) | 929123..929329 | + | 207 | WP_003460125.1 | co-regulatory protein PtrA N-terminal domain-containing protein | - |
| PI990_RS04390 (PI990_04390) | 929518..931332 | + | 1815 | WP_271659926.1 | copper resistance system multicopper oxidase | - |
| PI990_RS04395 (PI990_04395) | 931345..931656 | + | 312 | WP_003246749.1 | hypothetical protein | - |
| PI990_RS04400 (PI990_04400) | 931646..932737 | + | 1092 | WP_003246748.1 | copper resistance protein B | - |
| PI990_RS04405 (PI990_04405) | 932747..933589 | + | 843 | WP_003139525.1 | cytochrome c | - |
| PI990_RS04410 (PI990_04410) | 933579..934022 | + | 444 | WP_003246746.1 | DUF411 domain-containing protein | - |
| PI990_RS04415 (PI990_04415) | 934219..935526 | - | 1308 | WP_271659927.1 | OprD family porin | - |
| PI990_RS04420 (PI990_04420) | 935683..936015 | - | 333 | WP_037051470.1 | DUF2790 domain-containing protein | - |
| PI990_RS04425 (PI990_04425) | 936161..939310 | - | 3150 | WP_074918666.1 | efflux RND transporter permease subunit | - |
| PI990_RS04430 (PI990_04430) | 939307..940767 | - | 1461 | WP_003452298.1 | efflux RND transporter periplasmic adaptor subunit | - |
| PI990_RS04435 (PI990_04435) | 940764..942026 | - | 1263 | WP_003139513.1 | TolC family protein | - |
| PI990_RS04440 (PI990_04440) | 942954..943652 | + | 699 | WP_271659928.1 | inovirus Gp2 family protein | - |
| PI990_RS04445 (PI990_04445) | 943837..944082 | + | 246 | WP_033942931.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| PI990_RS04450 (PI990_04450) | 944072..944353 | + | 282 | WP_074918669.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| PI990_RS04455 (PI990_04455) | 944423..944596 | - | 174 | WP_009686156.1 | hypothetical protein | - |
| PI990_RS04460 (PI990_04460) | 944607..945104 | - | 498 | WP_074918671.1 | DNA repair protein RadC | - |
| PI990_RS04465 (PI990_04465) | 945076..946026 | - | 951 | WP_074918674.1 | hydrolase or metal-binding protein | - |
| PI990_RS04470 (PI990_04470) | 946113..947117 | - | 1005 | WP_271659929.1 | YqaJ viral recombinase family protein | - |
| PI990_RS04475 (PI990_04475) | 947198..948166 | - | 969 | WP_074918677.1 | DUF932 domain-containing protein | - |
| PI990_RS04480 (PI990_04480) | 948264..948593 | - | 330 | WP_074918679.1 | hypothetical protein | - |
| PI990_RS04485 (PI990_04485) | 948867..949139 | + | 273 | WP_003118374.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|