MGE detailed information
MGE type: Genomic_island MGE length: 57786 bp
Accession: NZ_CP116194 Location: 303956..361741 Organism: Escherichia coli strain DETEC-E1005 Replicon: chromosome
Accession: NZ_CP116194 Location: 303956..361741 Organism: Escherichia coli strain DETEC-E1005 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PIB63_RS01360 (300685) | 300685..301404 | - | 720 | WP_001540474.1 | two-component system response regulator DcuR | - |
| PIB63_RS01365 (301401) | 301401..303032 | - | 1632 | WP_001216482.1 | sensor histidine kinase | - |
| PIB63_RS01370 (303213) | 303213..303443 | + | 231 | WP_000373293.1 | 4Fe-4S mono-cluster protein YjdI | - |
| PIB63_RS01375 (303455) | 303455..303727 | + | 273 | WP_000405647.1 | GNAT family N-acetyltransferase | - |
| PIB63_RS01380 (303956) | 303956..304252 | + | 297 | WP_001312331.1 | type V toxin-antitoxin system endoribonuclease antitoxin GhoS | Antitoxin Detail |
| PIB63_RS01385 (304280) | 304280..304453 | + | 174 | WP_001173343.1 | type V toxin-antitoxin system toxin GhoT | Toxin Detail |
| PIB63_RS01390 (304572) | 304572..306089 | - | 1518 | WP_000003806.1 | lysine--tRNA ligase | - |
| PIB63_RS01395 (306326) | 306326..307783 | - | 1458 | WP_000856826.1 | dipeptide/tripeptide permease DtpC | - |
| PIB63_RS01400 (307842) | 307842..309989 | - | 2148 | WP_001296667.1 | lysine decarboxylase CadA | - |
| PIB63_RS01405 (310069) | 310069..311403 | - | 1335 | WP_000092909.1 | cadaverine/lysine antiporter | - |
| PIB63_RS01410 (311769) | 311769..313307 | - | 1539 | WP_001187191.1 | lysine decarboxylation/transport transcriptional activator CadC | - |
| PIB63_RS01415 (314056) | 314056..314625 | - | 570 | WP_001560692.1 | DUF4942 domain-containing protein | - |
| PIB63_RS01420 (314722) | 314722..314919 | - | 198 | WP_000839281.1 | DUF957 domain-containing protein | - |
| PIB63_RS01425 (314931) | 314931..315419 | - | 489 | WP_000777545.1 | DUF5983 family protein | - |
| PIB63_RS01430 (315416) | 315416..315790 | - | 375 | WP_000854753.1 | TA system toxin CbtA family protein | Toxin Detail |
| PIB63_RS01435 (315880) | 315880..316248 | - | 369 | WP_001540478.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| PIB63_RS01440 (316411) | 316411..316632 | - | 222 | WP_000692311.1 | DUF987 domain-containing protein | - |
| PIB63_RS01445 (316695) | 316695..317171 | - | 477 | WP_001186786.1 | RadC family protein | - |
| PIB63_RS01450 (317187) | 317187..317672 | - | 486 | WP_000214398.1 | antirestriction protein | - |
| PIB63_RS01455 (317763) | 317763..318581 | - | 819 | WP_001773857.1 | DUF932 domain-containing protein | - |
| PIB63_RS01460 (318671) | 318671..318904 | - | 234 | WP_001278283.1 | DUF905 family protein | - |
| PIB63_RS01465 (318910) | 318910..319587 | - | 678 | WP_001097301.1 | hypothetical protein | - |
| PIB63_RS01470 (319735) | 319735..320415 | - | 681 | WP_001282919.1 | WYL domain-containing protein | - |
| PIB63_RS01475 (320618) | 320618..321502 | - | 885 | WP_001116801.1 | YfjP family GTPase | - |
| PIB63_RS01480 (321603) | 321603..322826 | + | 1224 | WP_001773856.1 | hypothetical protein | - |
| PIB63_RS01485 (324279) | 324279..325010 | + | 732 | WP_001075472.1 | inovirus Gp2 family protein | - |
| PIB63_RS01490 (325357) | 325357..325932 | + | 576 | WP_000991593.1 | hypothetical protein | - |
| PIB63_RS01495 (326001) | 326001..326234 | + | 234 | WP_000958492.1 | AlpA family transcriptional regulator | - |
| PIB63_RS01500 (326231) | 326231..326356 | + | 126 | WP_000831909.1 | hypothetical protein | - |
| PIB63_RS01505 (326485) | 326485..326547 | + | 63 | Protein_288 | IS3 family transposase IS2 | Transposase |
| PIB63_RS01510 (326539) | 326539..326799 | - | 261 | Protein_289 | IS3 family transposase IS2 | Transposase |
| PIB63_RS01515 (326902) | 326902..328047 | + | 1146 | Protein_290 | Multidrug resistance protein MexB | VF |
| PIB63_RS01520 (328147) | 328147..328539 | + | 393 | WP_224156610.1 | TetR family transcriptional regulator | - |
| PIB63_RS01525 (328790) | 328790..329134 | + | 345 | WP_001773854.1 | hypothetical protein | VF |
| PIB63_RS01530 (329491) | 329491..330036 | - | 546 | WP_000015571.1 | propanediol utilization system shell hexameric protein GrpS | - |
| PIB63_RS01535 (330081) | 330081..331232 | - | 1152 | WP_001001003.1 | propanediol utilization system methionine adenosyltransferase GrpR | - |
| PIB63_RS01540 (331361) | 331361..332416 | - | 1056 | WP_000494233.1 | HTH-type transcriptional activator RhaR | VF |
| PIB63_RS01545 (332433) | 332433..333695 | - | 1263 | WP_001329690.1 | propanediol utilization sensor histidine kinase GrpP | - |
| PIB63_RS01550 (334245) | 334245..334766 | - | 522 | WP_000237741.1 | reverse transcriptase domain-containing protein | - |
| PIB63_RS01555 (334794) | 334794..335333 | - | 540 | WP_001332064.1 | maturase | - |
| PIB63_RS01560 (335819) | 335819..336724 | - | 906 | WP_001086421.1 | propanediol utilization system permease GrpO | - |
| PIB63_RS01565 (336861) | 336861..337778 | - | 918 | WP_001044977.1 | glycyl radical diol dehydratase-activating enzyme GrpN | - |
| PIB63_RS01570 (337887) | 337887..340439 | - | 2553 | WP_000890295.1 | glycyl radical diol dehydratase GrpM | - |
| PIB63_RS01575 (340488) | 340488..341063 | - | 576 | WP_000722279.1 | propanediol utilization system protease GrpL | - |
| PIB63_RS01580 (341074) | 341074..341373 | - | 300 | WP_000746009.1 | propanediol utilization system shell hexameric protein GrpK | - |
| PIB63_RS01585 (341397) | 341397..342914 | - | 1518 | WP_001773853.1 | N-succinylglutamate 5-semialdehyde dehydrogenase | VF |
| PIB63_RS01590 (342975) | 342975..343760 | - | 786 | WP_001205499.1 | propanediol utilization microcompartment protein GrpI | - |
| PIB63_RS01595 (343782) | 343782..344063 | - | 282 | WP_001301171.1 | propanediol utilization system shell hexameric protein GrpH | - |
| PIB63_RS01600 (344348) | 344348..345544 | - | 1197 | WP_001362987.1 | propanediol utilization system propionate kinase GrpG | - |
| PIB63_RS01605 (345573) | 345573..346070 | - | 498 | WP_001332069.1 | propanediol utilization system heme-binding protein GrpF | - |
| PIB63_RS01610 (346098) | 346098..346367 | - | 270 | WP_000280292.1 | propanediol utilization microcompartment vertex protein GrpE | - |
| PIB63_RS01615 (346379) | 346379..347104 | - | 726 | WP_001329683.1 | propanediol utilization system flavoprotein GrpD | - |
| PIB63_RS01620 (347088) | 347088..347846 | - | 759 | WP_001332070.1 | propanediol utilization system chaperone GrpC | - |
| PIB63_RS01625 (347901) | 347901..348587 | - | 687 | WP_001109982.1 | propanediol utilization system phosphotransacylase GrpB | - |
| PIB63_RS01630 (348727) | 348727..349845 | - | 1119 | WP_000135343.1 | NAD-dependent methanol dehydrogenase | VF |
| PIB63_RS01635 (350196) | 350196..350695 | + | 500 | Protein_314 | DNA-binding protein | - |
| PIB63_RS01640 (350791) | 350791..351024 | + | 234 | WP_000124176.1 | hypothetical protein | - |
| PIB63_RS01645 (351077) | 351077..351268 | - | 192 | WP_001287878.1 | DUF4222 domain-containing protein | - |
| PIB63_RS01650 (351948) | 351948..352292 | + | 345 | Protein_317 | POTRA domain-containing protein | - |
| PIB63_RS01655 (352292) | 352292..352768 | + | 477 | Protein_318 | VasL domain-containing protein | - |
| PIB63_RS01660 (353007) | 353007..354146 | + | 1140 | WP_271291442.1 | hypothetical protein | - |
| PIB63_RS01665 (354140) | 354140..354586 | + | 447 | WP_271291443.1 | hypothetical protein | - |
| PIB63_RS01670 (354718) | 354718..356502 | + | 1785 | WP_000269403.1 | P-loop NTPase fold protein | - |
| PIB63_RS01675 (356502) | 356502..357254 | + | 753 | WP_000537317.1 | hypothetical protein | - |
| PIB63_RS01680 (357251) | 357251..358555 | + | 1305 | WP_000192872.1 | hypothetical protein | - |
| PIB63_RS01685 (358552) | 358552..359277 | + | 726 | WP_000020778.1 | TatD family hydrolase | - |
| PIB63_RS01690 (359830) | 359830..360405 | - | 576 | WP_001774140.1 | SLATT domain-containing protein | - |
| PIB63_RS01695 (360413) | 360413..361741 | - | 1329 | WP_000019624.1 | nucleotidyltransferase | - |
| PIB63_RS01700 (361876) | 361876..362061 | - | 186 | Protein_327 | transposase domain-containing protein | - |
| PIB63_RS01710 (363308) | 363308..363655 | - | 348 | WP_000477079.1 | alcohol dehydrogenase catalytic domain-containing protein | - |
| PIB63_RS01715 (364273) | 364273..364966 | - | 694 | Protein_330 | IS1 family transposase | - |
| PIB63_RS01720 (365219) | 365219..366688 | + | 1470 | WP_001331566.1 | basic amino acid/polyamine antiporter | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|