MGE detailed information
MGE type: Genomic_island MGE length: 16088 bp
Accession: NZ_CP116181 Location: 4447262..4463349 Organism: Escherichia coli strain DETEC-E480 Replicon: chromosome
Accession: NZ_CP116181 Location: 4447262..4463349 Organism: Escherichia coli strain DETEC-E480 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PIB86_RS21880 (4443932) | 4443932..4445389 | + | 1458 | WP_000856826.1 | dipeptide/tripeptide permease DtpC | - |
| PIB86_RS21885 (4445626) | 4445626..4447143 | + | 1518 | WP_000003806.1 | lysine--tRNA ligase | - |
| PIB86_RS21890 (4447262) | 4447262..4447435 | - | 174 | WP_001173343.1 | type V toxin-antitoxin system toxin GhoT | Toxin Detail |
| PIB86_RS21895 (4447463) | 4447463..4447759 | - | 297 | WP_001312331.1 | type V toxin-antitoxin system endoribonuclease antitoxin GhoS | Antitoxin Detail |
| PIB86_RS21900 (4447987) | 4447987..4448259 | - | 273 | WP_000405647.1 | GNAT family N-acetyltransferase | - |
| PIB86_RS21905 (4448473) | 4448473..4452402 | - | 3930 | WP_001080129.1 | Serine protease EspC | VF |
| PIB86_RS21910 (4453557) | 4453557..4454387 | - | 831 | WP_001088099.1 | AraC family transcriptional regulator | - |
| PIB86_RS21915 (4455285) | 4455285..4459097 | - | 3813 | WP_000705882.1 | Temperature-sensitive hemagglutinin tsh autotransporter | VF |
| PIB86_RS21920 (4459498) | 4459498..4460022 | + | 525 | WP_000491818.1 | hypothetical protein | - |
| PIB86_RS21925 (4460087) | 4460087..4460779 | + | 693 | WP_000760483.1 | putative fimbrial chaperone YraI | VF |
| PIB86_RS21930 (4460812) | 4460812..4463349 | + | 2538 | WP_001296664.1 | Outer membrane usher protein FimD | VF |
| PIB86_RS21935 (4463459) | 4463459..4463731 | - | 273 | WP_000405645.1 | GNAT family N-acetyltransferase | - |
| PIB86_RS21940 (4463743) | 4463743..4463973 | - | 231 | WP_000371715.1 | 4Fe-4S mono-cluster protein YjdI | - |
| PIB86_RS21945 (4464154) | 4464154..4465785 | + | 1632 | WP_001216462.1 | sensor histidine kinase | - |
| PIB86_RS21950 (4465782) | 4465782..4466501 | + | 720 | WP_000611288.1 | two-component system response regulator DcuR | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|