MGE detailed information
MGE type: Genomic_island MGE length: 10759 bp
Accession: NZ_CP116123 Location: 3883544..3894302 Organism: Escherichia coli strain DETEC-P666 Replicon: chromosome
Accession: NZ_CP116123 Location: 3883544..3894302 Organism: Escherichia coli strain DETEC-P666 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PIB57_RS18465 (3878890) | 3878890..3879672 | - | 783 | WP_001550661.1 | type IV toxin-antitoxin system AbiEi family antitoxin domain-containing protein | - |
| PIB57_RS18470 (3879988) | 3879988..3883197 | + | 3210 | WP_001521910.1 | RNA-directed DNA polymerase | - |
| PIB57_RS18475 (3883544) | 3883544..3884014 | + | 471 | WP_000201185.1 | hypothetical protein | - |
| PIB57_RS18480 (3884011) | 3884011..3884113 | + | 103 | Protein_3618 | helix-turn-helix domain-containing protein | - |
| PIB57_RS18485 (3884205) | 3884205..3884363 | + | 159 | Protein_3619 | integrase | - |
| PIB57_RS18495 (3884568) | 3884568..3885821 | - | 1254 | WP_001550659.1 | glutamate-5-semialdehyde dehydrogenase | - |
| PIB57_RS18500 (3885833) | 3885833..3886936 | - | 1104 | WP_001285288.1 | glutamate 5-kinase | - |
| PIB57_RS18505 (3887224) | 3887224..3888279 | + | 1056 | WP_000749881.1 | phosphoporin PhoE | - |
| PIB57_RS18510 (3888318) | 3888318..3888719 | - | 402 | WP_000174684.1 | sigma factor-binding protein Crl | - |
| - (3889437) | 3889437..3889517 | - | 81 | NuclAT_10 | - | - |
| - (3889437) | 3889437..3889517 | - | 81 | NuclAT_10 | - | - |
| - (3889437) | 3889437..3889517 | - | 81 | NuclAT_10 | - | - |
| - (3889437) | 3889437..3889517 | - | 81 | NuclAT_10 | - | - |
| PIB57_RS18515 (3888777) | 3888777..3890021 | - | 1245 | WP_000189541.1 | esterase FrsA | - |
| PIB57_RS18520 (3890113) | 3890113..3890571 | - | 459 | WP_001291990.1 | xanthine phosphoribosyltransferase | - |
| PIB57_RS18525 (3890832) | 3890832..3892289 | + | 1458 | WP_001293009.1 | cytosol nonspecific dipeptidase | - |
| PIB57_RS18530 (3892346) | 3892346..3892698 | - | 353 | Protein_3627 | peptide chain release factor H | - |
| PIB57_RS18535 (3892694) | 3892694..3892900 | - | 207 | Protein_3628 | RtcB family protein | - |
| PIB57_RS18540 (3893146) | 3893146..3893598 | - | 453 | WP_019842500.1 | GNAT family N-acetyltransferase | - |
| PIB57_RS18545 (3893608) | 3893608..3894006 | - | 399 | WP_001263491.1 | type II toxin-antitoxin system mRNA interferase toxin YafO | Toxin Detail |
| PIB57_RS18550 (3894009) | 3894009..3894302 | - | 294 | WP_000554755.1 | type I toxin-antitoxin system antitoxin YafN | Antitoxin Detail |
| PIB57_RS18555 (3894354) | 3894354..3895409 | - | 1056 | WP_001550655.1 | DNA polymerase IV | - |
| PIB57_RS18560 (3895480) | 3895480..3896265 | - | 786 | WP_019842510.1 | putative lateral flagellar export/assembly protein LafU | - |
| PIB57_RS18565 (3896237) | 3896237..3897949 | + | 1713 | Protein_3634 | flagellar biosynthesis protein FlhA | - |
| PIB57_RS18570 (3898054) | 3898054..3898332 | + | 279 | WP_000598760.1 | type II toxin-antitoxin system HicA family toxin | - |
| PIB57_RS18575 (3898325) | 3898325..3898681 | + | 357 | WP_001030484.1 | type II toxin-antitoxin system HicB family antitoxin | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|