MGE detailed information
MGE type: Prophage MGE length: 38255 bp
Accession: NZ_CP116110 Location: 2237045..2275299 Organism: Escherichia coli strain DETEC-P80 Replicon: chromosome
Accession: NZ_CP116110 Location: 2237045..2275299 Organism: Escherichia coli strain DETEC-P80 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PIC84_RS10960 (2232944) | 2232944..2234164 | + | 1221 | WP_000225262.1 | DNA-binding transcriptional repressor Mlc | - |
| PIC84_RS10965 (2234289) | 2234289..2234984 | + | 696 | WP_000919231.1 | dethiobiotin synthase | - |
| PIC84_RS10970 (2234937) | 2234937..2236229 | - | 1293 | WP_001315626.1 | voltage-gated ClC-type chloride channel ClcB | - |
| PIC84_RS10975 (2236388) | 2236388..2237002 | - | 615 | WP_000148710.1 | Tat proofreading chaperone DmsD | - |
| PIC84_RS10980 (2237045) | 2237045..2237899 | - | 855 | WP_049254808.1 | dimethyl sulfoxide reductase anchor subunit family protein | - |
| PIC84_RS10985 (2237901) | 2237901..2238518 | - | 618 | WP_000213028.1 | dimethylsulfoxide reductase subunit B | - |
| PIC84_RS10990 (2238529) | 2238529..2240952 | - | 2424 | WP_001340362.1 | DmsA/YnfE/YnfF family dimethyl sulfoxide reductase | - |
| PIC84_RS10995 (2241013) | 2241013..2243439 | - | 2427 | WP_000041675.1 | DmsA/YnfE/YnfF family dimethyl sulfoxide reductase | - |
| PIC84_RS11000 (2243638) | 2243638..2243943 | - | 306 | WP_001300836.1 | DUF1161 domain-containing protein | - |
| PIC84_RS11005 (2244051) | 2244051..2244761 | + | 711 | WP_001321287.1 | YnfC family lipoprotein | - |
| PIC84_RS11010 (2244764) | 2244764..2245324 | - | 561 | WP_001138581.1 | spermidine N1-acetyltransferase | - |
| PIC84_RS11015 (2245359) | 2245359..2245700 | - | 342 | WP_000705211.1 | DUF1283 family protein | - |
| PIC84_RS11020 (2245835) | 2245835..2246161 | + | 327 | WP_000598292.1 | YnfA family protein | - |
| PIC84_RS11025 (2246367) | 2246367..2247581 | + | 1215 | WP_001295394.1 | starvation-sensing protein RspA | - |
| PIC84_RS11030 (2247593) | 2247593..2248612 | + | 1020 | WP_000836066.1 | Zn-dependent oxidoreductase | - |
| PIC84_RS11035 (2248800) | 2248800..2250080 | - | 1281 | WP_000876958.1 | Putative defective protein IntQ ; Integrase | Integrase |
| PIC84_RS11040 (2250115) | 2250115..2250366 | - | 252 | WP_000005552.1 | excisionase family protein | - |
| PIC84_RS11045 (2250439) | 2250439..2252148 | - | 1710 | Protein_2157 | 3'-5' exoribonuclease | - |
| PIC84_RS11050 (2252136) | 2252136..2252393 | + | 258 | Protein_2158 | hypothetical protein | - |
| PIC84_RS11055 (2252434) | 2252434..2252856 | + | 423 | WP_001151262.1 | DUF977 family protein | - |
| PIC84_RS11060 (2252853) | 2252853..2253342 | + | 490 | Protein_2160 | class I SAM-dependent methyltransferase | - |
| PIC84_RS11065 (2253725) | 2253725..2255264 | - | 1540 | Protein_2161 | IS66 family transposase ISEc22 | Transposase |
| PIC84_RS11070 (2255313) | 2255313..2255543 | - | 231 | Protein_2162 | IS66 family insertion sequence element accessory protein TnpB | - |
| PIC84_RS11075 (2255549) | 2255549..2255671 | - | 123 | Protein_2163 | IS66 family transposase ISEc22 | Transposase |
| PIC84_RS11080 (2255914) | 2255914..2256335 | + | 422 | Protein_2164 | hypothetical protein | - |
| PIC84_RS11085 (2256991) | 2256991..2258061 | + | 1071 | Protein_2165 | ISNCY family transposase ISCARN112 | Transposase |
| PIC84_RS11090 (2258134) | 2258134..2258283 | + | 150 | WP_011443592.1 | ISNCY family transposase ISCARN112 | Transposase |
| PIC84_RS11095 (2258720) | 2258720..2259052 | - | 333 | WP_001301033.1 | FlxA-like family protein | - |
| PIC84_RS11100 (2259255) | 2259255..2259560 | - | 306 | WP_001326990.1 | protein YdfV | - |
| PIC84_RS11105 (2259585) | 2259585..2259824 | + | 240 | WP_000534858.1 | type II toxin-antitoxin system antitoxin RelB | Antitoxin Detail |
| PIC84_RS11110 (2259824) | 2259824..2260111 | + | 288 | WP_000323025.1 | type II toxin-antitoxin system mRNA interferase RelE | Toxin Detail |
| PIC84_RS11115 (2260183) | 2260183..2260338 | + | 156 | WP_000813254.1 | type I toxin-antitoxin system toxin HokD | - |
| PIC84_RS11120 (2260555) | 2260555..2260806 | + | 252 | WP_000980994.1 | protein Rem | - |
| PIC84_RS11125 (2260873) | 2260873..2261151 | + | 279 | WP_012304870.1 | hypothetical protein | - |
| PIC84_RS11130 (2261153) | 2261153..2262202 | + | 1050 | WP_001265199.1 | DUF968 domain-containing protein | - |
| PIC84_RS11135 (2262216) | 2262216..2262968 | + | 753 | WP_001047135.1 | antitermination protein | - |
| PIC84_RS11140 (2263246) | 2263246..2263335 | - | 90 | WP_120795389.1 | hypothetical protein | - |
| PIC84_RS11145 (2263390) | 2263390..2263602 | - | 213 | WP_000087756.1 | cold shock-like protein CspF | - |
| PIC84_RS11150 (2263903) | 2263903..2264118 | + | 216 | WP_000066484.1 | cold shock-like protein CspB | - |
| PIC84_RS11155 (2264482) | 2264482..2264652 | - | 171 | WP_211180497.1 | putative zinc-binding protein YnfU | - |
| PIC84_RS11160 (2264872) | 2264872..2265087 | + | 216 | WP_000839590.1 | phage lysis protein EssD | - |
| PIC84_RS11165 (2265092) | 2265092..2265403 | + | 312 | WP_000189916.1 | YdfR family protein | - |
| PIC84_RS11170 (2265400) | 2265400..2265933 | + | 534 | WP_001092971.1 | lysozyme | - |
| PIC84_RS11175 (2265930) | 2265930..2266427 | + | 498 | WP_001071769.1 | DUF2514 domain-containing protein | - |
| PIC84_RS11180 (2266790) | 2266790..2267002 | + | 213 | WP_000066495.1 | cold shock protein CspI | - |
| PIC84_RS11185 (2267013) | 2267013..2267201 | + | 189 | WP_071524604.1 | cold-shock protein | - |
| PIC84_RS11190 (2267204) | 2267204..2267269 | + | 66 | WP_120795388.1 | small protein YnfR | - |
| PIC84_RS11195 (2267274) | 2267274..2267504 | + | 231 | WP_000720962.1 | protein YnfN | - |
| PIC84_RS11200 (2267676) | 2267676..2267849 | + | 174 | WP_001019606.1 | addiction module toxin, GnsA/GnsB family | - |
| PIC84_RS11205 (2268001) | 2268001..2268411 | - | 411 | WP_000373090.1 | DUF1398 domain-containing protein | - |
| PIC84_RS11210 (2268469) | 2268469..2268702 | - | 234 | WP_001368374.1 | YlcI/YnfO family protein | - |
| PIC84_RS11215 (2269091) | 2269091..2269636 | + | 546 | WP_000453611.1 | DNA-packaging protein | - |
| PIC84_RS11220 (2269611) | 2269611..2271416 | + | 1806 | WP_049254577.1 | phage terminase large subunit family protein | - |
| PIC84_RS11225 (2271416) | 2271416..2271991 | + | 576 | WP_000885611.1 | tail fiber assembly protein | - |
| PIC84_RS11230 (2272089) | 2272089..2272679 | - | 591 | WP_000078177.1 | Tn3 family transposase TnpR_ISSba14 | Transposase |
| PIC84_RS11235 (2272996) | 2272996..2273229 | - | 234 | WP_000836768.1 | cold shock protein YdfK | - |
| PIC84_RS11240 (2273298) | 2273298..2273411 | - | 114 | WP_120795384.1 | YnaM/YnfT family protein | - |
| PIC84_RS11245 (2273932) | 2273932..2275299 | + | 1368 | Protein_2197 | MHS family MFS transporter | - |
| PIC84_RS11250 (2275388) | 2275388..2276854 | + | 1467 | WP_272756111.1 | mannitol dehydrogenase family protein | - |
| PIC84_RS11255 (2276889) | 2276889..2277092 | - | 204 | WP_000214712.1 | putative selenium delivery protein YdfZ | - |
| PIC84_RS11260 (2277269) | 2277269..2277955 | - | 687 | WP_000215549.1 | DNA-binding transcriptional regulator rspR | - |
| PIC84_RS11265 (2278044) | 2278044..2278790 | - | 747 | WP_000636571.1 | bifunctional NADP-dependent 3-hydroxy acid dehydrogenase/3-hydroxypropionate dehydrogenase YdfG | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|