MGE detailed information
MGE type: Conjugative plasmid MGE length: 87637 bp
Accession: NZ_CP116086 Location: 1..87637 Organism: Escherichia coli strain DETEC-S566 Replicon: plasmid pDETEC79
Accession: NZ_CP116086 Location: 1..87637 Organism: Escherichia coli strain DETEC-S566 Replicon: plasmid pDETEC79
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PIC95_RS24665 (PIC95_24665) | 495..1367 | + | 873 | WP_000729438.1 | incFII family plasmid replication initiator RepA | - |
| PIC95_RS24670 (PIC95_24670) | 2062..2220 | + | 159 | WP_000829588.1 | hypothetical protein | - |
| PIC95_RS24675 (PIC95_24675) | 2275..2544 | + | 270 | WP_000079932.1 | type II toxin-antitoxin system antitoxin YacA | Antitoxin Detail |
| PIC95_RS24680 (PIC95_24680) | 2544..2822 | + | 279 | WP_013009346.1 | type II toxin-antitoxin system toxin YacB | Toxin Detail |
| PIC95_RS24685 (PIC95_24685) | 3018..3314 | - | 297 | WP_001419651.1 | hypothetical protein | - |
| PIC95_RS24690 (PIC95_24690) | 3659..4246 | + | 588 | WP_001418189.1 | serine acetyltransferase | - |
| PIC95_RS24695 (PIC95_24695) | 4528..5121 | - | 594 | WP_001401779.1 | ProQ/FINO family protein | - |
| PIC95_RS24700 (PIC95_24700) | 5475..6821 | + | 1347 | WP_001132021.1 | protein YagA | - |
| PIC95_RS24705 (PIC95_24705) | 7153..7857 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| PIC95_RS24710 (PIC95_24710) | 8168..8470 | - | 303 | WP_001245884.1 | hypothetical protein | - |
| PIC95_RS24715 (PIC95_24715) | 8467..9093 | - | 627 | WP_000587689.1 | ParA family plasmid-partitioning AAA ATPase | - |
| PIC95_RS24720 (PIC95_24720) | 9305..10576 | - | 1272 | WP_000457510.1 | Y-family DNA polymerase | - |
| PIC95_RS24725 (PIC95_24725) | 10576..11013 | - | 438 | WP_000109062.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| PIC95_RS24730 (PIC95_24730) | 11010..11258 | - | 249 | WP_000618110.1 | DinI-like family protein | - |
| PIC95_RS24735 (PIC95_24735) | 11677..12579 | + | 903 | WP_064670763.1 | DUF1281 domain-containing protein | - |
| PIC95_RS24740 (PIC95_24740) | 12583..12888 | + | 306 | WP_013307862.1 | hypothetical protein | - |
| PIC95_RS24745 (PIC95_24745) | 12964..13647 | + | 684 | WP_001401756.1 | DNA methylase | - |
| PIC95_RS24750 (PIC95_24750) | 13648..13869 | + | 222 | WP_001104871.1 | hypothetical protein | - |
| PIC95_RS24755 (PIC95_24755) | 13763..14317 | + | 555 | WP_077635412.1 | DUF1380 family protein | - |
| PIC95_RS24760 (PIC95_24760) | 14362..15137 | + | 776 | Protein_19 | hypothetical protein | - |
| PIC95_RS24765 (PIC95_24765) | 15552..15977 | + | 426 | WP_001198874.1 | antirestriction protein | - |
| PIC95_RS24770 (PIC95_24770) | 16024..16446 | + | 423 | WP_013307864.1 | DUF1380 family protein | - |
| PIC95_RS24775 (PIC95_24775) | 16443..16634 | + | 192 | WP_001703906.1 | hypothetical protein | - |
| PIC95_RS24780 (PIC95_24780) | 16967..17035 | - | 69 | Protein_23 | pilus protein | - |
| PIC95_RS24785 (PIC95_24785) | 17404..17931 | + | 528 | WP_001760699.1 | single-stranded DNA-binding protein | - |
| PIC95_RS24790 (PIC95_24790) | 17989..18222 | + | 234 | WP_000006020.1 | DUF905 domain-containing protein | - |
| PIC95_RS24795 (PIC95_24795) | 18281..20239 | + | 1959 | WP_064670764.1 | ParB/RepB/Spo0J family partition protein | - |
| PIC95_RS24800 (PIC95_24800) | 20294..20728 | + | 435 | WP_001578018.1 | conjugation system SOS inhibitor PsiB | - |
| PIC95_RS24805 (PIC95_24805) | 20725..21444 | + | 720 | WP_001276268.1 | plasmid SOS inhibition protein A | - |
| PIC95_RS24810 (PIC95_24810) | 21441..22037 | + | 597 | WP_001401763.1 | hypothetical protein | - |
| PIC95_RS24815 (PIC95_24815) | 22499..22999 | + | 501 | WP_000117622.1 | antirestriction protein ArdA | - |
| PIC95_RS24820 (PIC95_24820) | 23732..24166 | + | 435 | WP_000218862.1 | hypothetical protein | - |
| PIC95_RS24825 (PIC95_24825) | 24259..24525 | + | 267 | WP_001247860.1 | hypothetical protein | - |
| PIC95_RS24830 (PIC95_24830) | 24702..25091 | + | 390 | WP_000833767.1 | hypothetical protein | - |
| PIC95_RS24835 (PIC95_24835) | 25088..25978 | + | 891 | WP_000038343.1 | Recombination-promoting nuclease RpnA | VF |
| PIC95_RS24840 (PIC95_24840) | 25978..26223 | + | 246 | WP_001260882.1 | hypothetical protein | - |
| PIC95_RS24845 (PIC95_24845) | 26254..26505 | - | 252 | WP_000148286.1 | helix-turn-helix transcriptional regulator | - |
| PIC95_RS24850 (PIC95_24850) | 27085..27933 | + | 849 | WP_013307867.1 | DUF4942 domain-containing protein | - |
| PIC95_RS24855 (PIC95_24855) | 28019..28354 | - | 336 | WP_000157090.1 | hypothetical protein | - |
| PIC95_RS24860 (PIC95_24860) | 28587..28919 | + | 333 | WP_001291057.1 | plasmid mobilization protein MobA | - |
| PIC95_RS24865 (PIC95_24865) | 28931..31651 | + | 2721 | WP_000991405.1 | Protein TraI | Relaxase |
| PIC95_RS24870 (PIC95_24870) | 31872..34172 | - | 2301 | WP_013307869.1 | F-type conjugative transfer protein TrbC | - |
| PIC95_RS24875 (PIC95_24875) | 34153..35277 | - | 1125 | WP_000152382.1 | DsbC family protein | - |
| PIC95_RS24880 (PIC95_24880) | 35274..36608 | - | 1335 | WP_271292041.1 | IncI1-type conjugal transfer protein TrbA | - |
| PIC95_RS24885 | 37405..37500 | + | 96 | WP_001363141.1 | DinQ-like type I toxin DqlB | - |
| PIC95_RS24890 (PIC95_24890) | 37563..37739 | - | 177 | WP_001054907.1 | hypothetical protein | - |
| PIC95_RS24895 (PIC95_24895) | 37889..38356 | - | 468 | WP_000598962.1 | thermonuclease family protein | - |
| PIC95_RS24900 (PIC95_24900) | 38515..39138 | + | 624 | WP_001155247.1 | helix-turn-helix domain-containing protein | - |
| PIC95_RS24905 (PIC95_24905) | 39336..39551 | - | 216 | WP_000266543.1 | hypothetical protein | - |
| PIC95_RS24910 (PIC95_24910) | 39555..39923 | - | 369 | WP_001345852.1 | hypothetical protein | - |
| PIC95_RS24915 (PIC95_24915) | 40214..40456 | - | 243 | WP_000650923.1 | hypothetical protein | - |
| PIC95_RS24920 (PIC95_24920) | 40786..40938 | + | 153 | WP_001302699.1 | Hok/Gef family protein | - |
| PIC95_RS24925 (PIC95_24925) | 41076..42662 | - | 1587 | WP_000004564.1 | sigma factor-like helix-turn-helix DNA-binding protein | - |
| PIC95_RS24930 (PIC95_24930) | 42936..43589 | - | 654 | WP_001401768.1 | plasmid IncI1-type surface exclusion protein ExcA | - |
| PIC95_RS24935 (PIC95_24935) | 43677..45842 | - | 2166 | WP_000691808.1 | DotA/TraY family protein | - |
| PIC95_RS24940 (PIC95_24940) | 45917..46486 | - | 570 | WP_000650752.1 | conjugal transfer protein TraX | - |
| PIC95_RS24945 (PIC95_24945) | 46483..47688 | - | 1206 | WP_001189548.1 | conjugal transfer protein TraW | - |
| PIC95_RS24950 (PIC95_24950) | 47646..48266 | - | 621 | WP_000286854.1 | hypothetical protein | - |
| PIC95_RS24955 (PIC95_24955) | 48266..51310 | - | 3045 | WP_013307872.1 | conjugal transfer nucleotide-binding protein | - |
| PIC95_RS24960 (PIC95_24960) | 51605..52423 | - | 819 | WP_000753550.1 | hypothetical protein | - |
| PIC95_RS24965 (PIC95_24965) | 52338..52589 | - | 252 | WP_001277573.1 | hypothetical protein | - |
| PIC95_RS24970 (PIC95_24970) | 52646..53044 | - | 399 | WP_000088813.1 | hypothetical protein | - |
| PIC95_RS24975 (PIC95_24975) | 53091..53621 | - | 531 | WP_000987023.1 | conjugal transfer protein TraQ | - |
| PIC95_RS24980 (PIC95_24980) | 53618..54331 | - | 714 | WP_000787003.1 | conjugal transfer protein TraP | - |
| PIC95_RS24985 (PIC95_24985) | 54328..55665 | - | 1338 | WP_013307873.1 | conjugal transfer protein TraO | - |
| PIC95_RS24990 (PIC95_24990) | 55669..56643 | - | 975 | WP_000547383.1 | hypothetical protein | VF |
| PIC95_RS24995 (PIC95_24995) | 56654..57349 | - | 696 | WP_001681668.1 | DotI/IcmL family type IV secretion protein | - |
| PIC95_RS25000 (PIC95_25000) | 57361..57711 | - | 351 | WP_001056367.1 | hypothetical protein | - |
| PIC95_RS25005 (PIC95_25005) | 57728..61789 | - | 4062 | WP_013307874.1 | DUF5710 domain-containing protein | - |
| PIC95_RS25010 (PIC95_25010) | 62143..62724 | - | 582 | WP_025750394.1 | hypothetical protein | - |
| PIC95_RS25015 (PIC95_25015) | 62732..63187 | - | 456 | Protein_70 | IS5 family transposase | - |
| PIC95_RS25020 (PIC95_25020) | 63222..64097 | - | 876 | WP_001617865.1 | Beta-lactamase CTX-M-97 | ARG |
| PIC95_RS25025 (PIC95_25025) | 64347..65609 | - | 1263 | WP_000608644.1 | IS1380 family transposase ISEcp1 | Transposase |
| PIC95_RS25030 (PIC95_25030) | 66021..66311 | - | 291 | WP_000817801.1 | IcmT/TraK family protein | - |
| PIC95_RS25035 (PIC95_25035) | 66308..67456 | - | 1149 | WP_013307876.1 | putative protein YggR | VF |
| PIC95_RS25040 (PIC95_25040) | 67440..68276 | - | 837 | WP_000745049.1 | hypothetical protein | VF |
| PIC95_RS25045 (PIC95_25045) | 68273..68731 | - | 459 | WP_025750398.1 | DotD/TraH family lipoprotein | - |
| PIC95_RS25050 (PIC95_25050) | 68835..70037 | - | 1203 | WP_013307879.1 | conjugal transfer protein TraF | - |
| PIC95_RS25055 (PIC95_25055) | 70139..70960 | - | 822 | WP_001681675.1 | hypothetical protein | - |
| PIC95_RS25060 (PIC95_25060) | 71173..72297 | - | 1125 | WP_013307880.1 | site-specific integrase | - |
| PIC95_RS25065 (PIC95_25065) | 72621..72818 | - | 198 | WP_001356717.1 | hypothetical protein | - |
| PIC95_RS25070 (PIC95_25070) | 72815..72946 | - | 132 | WP_256465069.1 | hypothetical protein | - |
| PIC95_RS25075 (PIC95_25075) | 73134..73394 | - | 261 | WP_230139596.1 | pilus assembly protein | - |
| PIC95_RS25080 (PIC95_25080) | 73550..73789 | + | 240 | WP_000271302.1 | hypothetical protein | - |
| PIC95_RS25085 (PIC95_25085) | 73794..75155 | - | 1362 | WP_021532399.1 | hypothetical protein | VF |
| PIC95_RS25090 (PIC95_25090) | 75173..75799 | - | 627 | WP_013307883.1 | prepilin peptidase | - |
| PIC95_RS25095 (PIC95_25095) | 75815..76300 | - | 486 | WP_001080767.1 | hypothetical protein | VF |
| PIC95_RS25100 (PIC95_25100) | 76345..76881 | - | 537 | WP_000111521.1 | hypothetical protein | VF |
| PIC95_RS25105 (PIC95_25105) | 76943..78037 | - | 1095 | WP_000697154.1 | Toxin coregulated pilus biosynthesis protein E | VF |
| PIC95_RS25110 (PIC95_25110) | 78039..79547 | - | 1509 | WP_000880806.1 | Toxin coregulated pilus biosynthesis protein T | VF |
| PIC95_RS25115 (PIC95_25115) | 79650..80108 | - | 459 | WP_000095887.1 | hypothetical protein | VF |
| PIC95_RS25120 (PIC95_25120) | 80098..81393 | - | 1296 | WP_000129883.1 | type 4b pilus protein PilO2 | - |
| PIC95_RS25125 (PIC95_25125) | 81414..83033 | - | 1620 | WP_001035562.1 | Outer membrane lipoprotein BfpB | VF |
| PIC95_RS25130 (PIC95_25130) | 83065..83502 | - | 438 | WP_000539952.1 | hypothetical protein | VF |
| PIC95_RS25135 (PIC95_25135) | 83506..84576 | - | 1071 | WP_000730430.1 | hypothetical protein | VF |
| PIC95_RS25140 (PIC95_25140) | 84817..85137 | - | 321 | WP_001447108.1 | hypothetical protein | - |
| PIC95_RS25145 (PIC95_25145) | 85253..85495 | - | 243 | WP_021515452.1 | PilI type IV pilus biogenesis protein | - |
| PIC95_RS25150 (PIC95_25150) | 85576..85719 | - | 144 | WP_000176500.1 | hypothetical protein | - |
| PIC95_RS25155 (PIC95_25155) | 85986..86648 | - | 663 | WP_005082527.1 | hypothetical protein | - |
| PIC95_RS25160 (PIC95_25160) | 86788..87294 | - | 507 | WP_005082529.1 | transcription termination/antitermination NusG family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|