MGE detailed information
MGE type: Genomic_island MGE length: 25291 bp
Accession: NZ_CP116071 Location: 4384942..4410232 Organism: Escherichia coli strain DETEC-S589 Replicon: chromosome
Accession: NZ_CP116071 Location: 4384942..4410232 Organism: Escherichia coli strain DETEC-S589 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PIC30_RS21770 (4381467) | 4381467..4382192 | - | 726 | WP_000066579.1 | type 1 fimbria chaperone FimC | - |
| PIC30_RS21775 (4382229) | 4382229..4382768 | - | 540 | WP_000824098.1 | fimbrial protein | - |
| PIC30_RS21780 (4382833) | 4382833..4383387 | - | 555 | WP_000695580.1 | type 1 fimbrial major subunit FimA | - |
| PIC30_RS21785 (4383868) | 4383868..4384464 | - | 597 | WP_000044708.1 | type 1 fimbria switch DNA invertase FimE | - |
| PIC30_RS21790 (4384942) | 4384942..4385544 | - | 603 | WP_000790574.1 | ISKra4 family transposase ISCep1 | VF |
| PIC30_RS21795 (4387010) | 4387010..4387726 | + | 717 | WP_001295734.1 | N-acetylneuraminic acid outer membrane channel NanC | - |
| PIC30_RS21800 (4387746) | 4387746..4388852 | + | 1107 | WP_001298082.1 | N-acetylneuraminate epimerase | - |
| PIC30_RS21805 (4388917) | 4388917..4389897 | + | 981 | WP_097494581.1 | sialate O-acetylesterase | - |
| PIC30_RS21810 (4389905) | 4389905..4390009 | - | 105 | Protein_4272 | HNH endonuclease | - |
| PIC30_RS21815 (4390109) | 4390109..4390981 | + | 873 | WP_000168586.1 | HNH endonuclease | - |
| PIC30_RS21820 (4391026) | 4391026..4391205 | + | 180 | Protein_4274 | peptidase | - |
| PIC30_RS21825 (4391604) | 4391604..4393367 | - | 1764 | WP_242794220.1 | hypothetical protein | - |
| PIC30_RS21830 (4394595) | 4394595..4394744 | - | 150 | Protein_4276 | hypothetical protein | - |
| PIC30_RS21835 (4394829) | 4394829..4395026 | - | 198 | WP_000839272.1 | DUF957 domain-containing protein | - |
| PIC30_RS21840 (4395038) | 4395038..4395526 | - | 489 | WP_000761683.1 | DUF5983 family protein | - |
| PIC30_RS21845 (4395523) | 4395523..4395900 | - | 378 | WP_001094426.1 | TA system toxin CbtA family protein | Toxin Detail |
| PIC30_RS21850 (4395990) | 4395990..4396358 | - | 369 | WP_001285575.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| PIC30_RS21855 (4396438) | 4396438..4396659 | - | 222 | WP_000692350.1 | DUF987 domain-containing protein | - |
| PIC30_RS21860 (4396746) | 4396746..4397222 | - | 477 | WP_001298074.1 | RadC family protein | - |
| PIC30_RS21865 (4397237) | 4397237..4397722 | - | 486 | WP_097494582.1 | antirestriction protein | - |
| PIC30_RS21870 (4397813) | 4397813..4398631 | - | 819 | WP_001175160.1 | DUF932 domain-containing protein | - |
| PIC30_RS21875 (4398721) | 4398721..4398954 | - | 234 | WP_001278290.1 | DUF905 family protein | - |
| PIC30_RS21880 (4398960) | 4398960..4399637 | - | 678 | WP_001097301.1 | hypothetical protein | - |
| PIC30_RS21885 (4399785) | 4399785..4400465 | - | 681 | WP_001282919.1 | WYL domain-containing protein | - |
| PIC30_RS21890 (4400668) | 4400668..4401552 | - | 885 | WP_000010377.1 | YfjP family GTPase | - |
| PIC30_RS21895 (4401653) | 4401653..4402876 | + | 1224 | WP_001107221.1 | hypothetical protein | - |
| PIC30_RS21900 (4404359) | 4404359..4405090 | + | 732 | WP_001075487.1 | inovirus Gp2 family protein | - |
| PIC30_RS21905 (4405418) | 4405418..4406296 | + | 879 | WP_000769117.1 | restriction endonuclease | - |
| PIC30_RS21910 (4406352) | 4406352..4406986 | - | 635 | Protein_4292 | IS3 family transposase IS2 | Transposase |
| PIC30_RS21915 (4407284) | 4407284..4407400 | + | 117 | Protein_4293 | phosphoporin PhoE | - |
| PIC30_RS21920 (4407402) | 4407402..4407535 | + | 134 | Protein_4294 | phosphate-starvation-inducible protein PsiE | - |
| PIC30_RS21925 (4407610) | 4407610..4409061 | - | 1452 | WP_001063846.1 | Na+/H+ antiporter NhaC | - |
| PIC30_RS21930 (4409054) | 4409054..4410232 | - | 1179 | WP_001534804.1 | MalY/PatB family protein | - |
| PIC30_RS21935 (4410465) | 4410465..4410599 | + | 135 | Protein_4297 | hypothetical protein | - |
| PIC30_RS21940 (4410706) | 4410706..4411919 | + | 1214 | WP_164504460.1 | IS3 family transposase | - |
| PIC30_RS21945 (4412210) | 4412210..4412788 | + | 579 | WP_000926369.1 | TetR/AcrR family transcriptional regulator | - |
| PIC30_RS21950 (4412811) | 4412811..4413629 | + | 819 | WP_097494583.1 | winged helix-turn-helix domain-containing protein | - |
| PIC30_RS21955 (4413629) | 4413629..4414147 | + | 519 | WP_001217008.1 | FidL-like protein | - |
| PIC30_RS21960 (4414666) | 4414666..4414944 | + | 279 | WP_000502008.1 | BMC domain-containing protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|