MGE detailed information

MGE type: Conjugative plasmid        MGE length: 159067 bp
Accession: NZ_CP114363        Location: 1..159067         Organism: Klebsiella variicola strain 2022CK-00568       Replicon: plasmid unnamed2


Gene structure


The 5 kb flanking regions of this MGE are displayed.

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
OPU52_RS28175 (OPU52_28170) 1..1101 + 1101 WP_001348532.1 RepB family plasmid replication initiator protein -
OPU52_RS28180 (OPU52_28175) 2138..2572 - 435 WP_004201092.1 hypothetical protein -
OPU52_RS28185 (OPU52_28180) 2590..3705 - 1116 WP_000946104.1 phosphoadenosine phosphosulfate reductase family protein -
OPU52_RS28190 (OPU52_28185) 3973..4581 + 609 WP_000849069.1 hypothetical protein -
OPU52_RS28195 (OPU52_28190) 4586..5107 + 522 WP_000393783.1 hypothetical protein -
OPU52_RS28200 (OPU52_28195) 5110..5631 + 522 WP_000648873.1 hypothetical protein -
OPU52_RS28205 (OPU52_28200) 5728..6201 + 474 WP_000057876.1 hypothetical protein -
OPU52_RS28210 (OPU52_28205) 6212..6505 + 294 WP_001370730.1 hypothetical protein -
OPU52_RS28215 (OPU52_28210) 6510..7364 + 855 WP_000539391.1 hypothetical protein -
OPU52_RS28220 (OPU52_28215) 7364..8323 + 960 WP_000829617.1 S49 family peptidase -
OPU52_RS28225 (OPU52_28220) 8339..9199 + 861 WP_004201087.1 DsbA family protein -
OPU52_RS28230 (OPU52_28225) 9233..9661 + 429 WP_000591076.1 hypothetical protein -
OPU52_RS28235 (OPU52_28230) 9719..10078 + 360 WP_000422769.1 hypothetical protein -
OPU52_RS28240 (OPU52_28235) 10078..10524 + 447 WP_000919343.1 hypothetical protein -
OPU52_RS28245 (OPU52_28240) 10521..11039 + 519 WP_000210757.1 nitrite reductase -
OPU52_RS28250 (OPU52_28245) 11039..11269 + 231 WP_000972665.1 hypothetical protein -
OPU52_RS28255 (OPU52_28250) 11256..12113 + 858 WP_001167036.1 hypothetical protein -
OPU52_RS28260 (OPU52_28255) 12139..12330 + 192 WP_001270409.1 hypothetical protein -
OPU52_RS28265 (OPU52_28260) 12333..12860 + 528 WP_004201083.1 thermonuclease family protein -
OPU52_RS28270 (OPU52_28265) 12918..13190 + 273 WP_001043046.1 HU family DNA-binding protein -
OPU52_RS28275 (OPU52_28270) 13279..13572 + 294 WP_001239998.1 hypothetical protein -
OPU52_RS28280 (OPU52_28275) 13599..13901 - 303 WP_000124640.1 XRE family transcriptional regulator Antitoxin Detail
OPU52_RS28285 (OPU52_28280) 13906..14256 - 351 WP_000270043.1 type II toxin-antitoxin system RelE/ParE family toxin Toxin Detail
OPU52_RS28290 (OPU52_28285) 14419..14967 + 549 WP_001061573.1 hypothetical protein -
OPU52_RS28295 (OPU52_28290) 15308..15502 + 195 WP_000343597.1 hypothetical protein -
OPU52_RS28300 (OPU52_28295) 15513..15884 + 372 WP_000516918.1 hypothetical protein -
OPU52_RS28305 (OPU52_28300) 15877..16347 + 471 WP_001281821.1 hypothetical protein -
OPU52_RS28310 (OPU52_28305) 16362..16697 - 336 WP_000683477.1 hypothetical protein -
OPU52_RS28315 (OPU52_28310) 16794..17282 + 489 WP_001273096.1 DUF1643 domain-containing protein -
OPU52_RS28320 (OPU52_28315) 17285..17782 + 498 WP_000062185.1 hypothetical protein -
OPU52_RS28325 (OPU52_28320) 18344..19276 + 933 WP_000434070.1 hypothetical protein -
OPU52_RS28330 (OPU52_28325) 19350..20813 + 1464 WP_004201081.1 AAA family ATPase -
OPU52_RS28335 (OPU52_28330) 20875..21267 + 393 WP_000018404.1 hypothetical protein -
OPU52_RS28340 (OPU52_28335) 21316..21510 + 195 WP_000757530.1 DUF2997 domain-containing protein -
OPU52_RS28345 (OPU52_28340) 21555..22688 + 1134 WP_223369384.1 hypothetical protein -
OPU52_RS28350 (OPU52_28345) 22700..23047 + 348 WP_000039129.1 hypothetical protein -
OPU52_RS28355 (OPU52_28350) 23044..23472 + 429 WP_000988988.1 hypothetical protein -
OPU52_RS28360 (OPU52_28355) 23465..24028 + 564 WP_000004671.1 hypothetical protein -
OPU52_RS28365 (OPU52_28360) 24040..24609 + 570 WP_001256126.1 hypothetical protein -
OPU52_RS28370 (OPU52_28365) 24612..25157 + 546 WP_000435225.1 hypothetical protein -
OPU52_RS28375 (OPU52_28370) 25274..26212 + 939 WP_000268394.1 chromosome partitioning protein ParB -
OPU52_RS28380 (OPU52_28375) 26647..26889 + 243 WP_001096360.1 hypothetical protein -
OPU52_RS28385 (OPU52_28380) 26892..27254 + 363 WP_001258026.1 hypothetical protein -
OPU52_RS28390 (OPU52_28385) 27247..28491 + 1245 WP_000098294.1 site-specific DNA-methyltransferase -
OPU52_RS28395 (OPU52_28390) 28505..28954 + 450 WP_001053910.1 hypothetical protein -
OPU52_RS28400 (OPU52_28395) 28936..29247 + 312 WP_000380893.1 hypothetical protein -
OPU52_RS28405 (OPU52_28400) 29421..30206 + 786 WP_001151305.1 Sporulation initiation inhibitor protein Soj VF
OPU52_RS28410 (OPU52_28405) 30210..31391 + 1182 WP_001207227.1 KorB domain-containing protein -
OPU52_RS28415 (OPU52_28410) 31440..31712 + 273 WP_000703827.1 helix-turn-helix domain-containing protein -
OPU52_RS28420 (OPU52_28415) 31765..32400 - 636 WP_000074431.1 N-6 DNA methylase -
OPU52_RS28425 (OPU52_28420) 32492..32635 - 144 WP_000939033.1 hypothetical protein -
OPU52_RS28430 (OPU52_28425) 32962..33339 + 378 WP_001125904.1 hypothetical protein -
OPU52_RS28435 (OPU52_28430) 33332..33613 + 282 WP_000044823.1 hypothetical protein -
OPU52_RS28440 (OPU52_28435) 33588..34262 + 675 WP_000344149.1 hypothetical protein -
OPU52_RS28445 (OPU52_28440) 34255..34761 + 507 WP_000566443.1 hypothetical protein -
OPU52_RS28450 (OPU52_28445) 34767..35078 + 312 WP_002210541.1 hypothetical protein -
OPU52_RS28455 (OPU52_28450) 35087..35587 + 501 WP_000647188.1 hypothetical protein -
OPU52_RS28460 (OPU52_28455) 35591..37018 + 1428 WP_000936897.1 DNA cytosine methyltransferase -
OPU52_RS28465 (OPU52_28460) 37018..37674 + 657 WP_000268552.1 hypothetical protein -
OPU52_RS28470 (OPU52_28465) 37730..38347 + 618 WP_000464630.1 hypothetical protein -
OPU52_RS28475 (OPU52_28470) 38612..39592 + 981 WP_014386491.1 IS5 family transposase ISKpn26 Transposase
OPU52_RS28480 (OPU52_28475) 39780..40058 + 279 WP_000746034.1 hypothetical protein -
OPU52_RS28485 (OPU52_28480) 40149..40637 - 489 WP_004201072.1 hypothetical protein -
OPU52_RS28490 (OPU52_28485) 40652..42844 - 2193 WP_000366823.1 DNA topoisomerase 3 -
OPU52_RS28495 (OPU52_28490) 42844..43077 - 234 WP_001191890.1 hypothetical protein -
OPU52_RS28500 (OPU52_28495) 43059..43676 - 618 WP_001249395.1 hypothetical protein -
OPU52_RS28505 (OPU52_28500) 43844..46816 + 2973 WP_001326173.1 hypothetical protein Relaxase
OPU52_RS28510 (OPU52_28505) 46813..48678 + 1866 WP_000178857.1 conjugative transfer system coupling protein TraD -
OPU52_RS28515 (OPU52_28510) 48728..49273 + 546 WP_000228720.1 hypothetical protein -
OPU52_RS28520 (OPU52_28515) 49230..49859 + 630 WP_000743449.1 DUF4400 domain-containing protein -
OPU52_RS28525 (OPU52_28520) 49869..50315 + 447 WP_000122507.1 hypothetical protein -
OPU52_RS28530 (OPU52_28525) 50325..50702 + 378 WP_000869297.1 hypothetical protein -
OPU52_RS28535 (OPU52_28530) 50702..51364 + 663 WP_001231464.1 hypothetical protein -
OPU52_RS28540 (OPU52_28535) 51700..52065 + 366 WP_001052530.1 hypothetical protein -
OPU52_RS28545 (OPU52_28540) 52210..52491 + 282 WP_000805625.1 type IV conjugative transfer system protein TraL -
OPU52_RS28550 (OPU52_28545) 52488..53114 + 627 WP_001049717.1 TraE/TraK family type IV conjugative transfer system protein -
OPU52_RS28555 (OPU52_28550) 53098..54015 + 918 WP_000794249.1 type-F conjugative transfer system secretin TraK -
OPU52_RS28560 (OPU52_28555) 54015..55328 + 1314 WP_024131605.1 TraB/VirB10 family protein -
OPU52_RS28565 (OPU52_28560) 55325..55903 + 579 WP_000793435.1 type IV conjugative transfer system lipoprotein TraV -
OPU52_RS28570 (OPU52_28565) 55907..56299 + 393 WP_000479535.1 TraA family conjugative transfer protein -
OPU52_RS28575 (OPU52_28570) 56584..57846 + 1263 WP_000608644.1 IS1380 family transposase ISEcp1 Transposase
OPU52_RS28580 (OPU52_28575) 58170..59315 + 1146 WP_015058212.1 Beta-lactamase ARG
OPU52_RS28585 (OPU52_28580) 59409..59942 + 534 WP_001221666.1 lipocalin family protein -
OPU52_RS28590 (OPU52_28585) 59939..60256 - 318 WP_000118520.1 quaternary ammonium compound efflux SMR transporter SugE -
OPU52_RS28595 (OPU52_28590) 60984..61694 + 711 Protein_85 DUF4165 domain-containing protein -
OPU52_RS28605 (OPU52_28600) 63085..67695 + 4611 WP_269136672.1 Ig-like domain-containing protein -
OPU52_RS28610 (OPU52_28605) 67844..68551 + 708 WP_001259346.1 DsbC family protein -
OPU52_RS28615 (OPU52_28610) 68548..70995 + 2448 WP_000637384.1 type IV secretion system protein TraC -
OPU52_RS28620 (OPU52_28615) 71010..71327 + 318 WP_000351984.1 hypothetical protein -
OPU52_RS28625 (OPU52_28620) 71324..71854 + 531 WP_001010740.1 S26 family signal peptidase -
OPU52_RS28630 (OPU52_28625) 71817..73082 + 1266 WP_001447719.1 TrbC family F-type conjugative pilus assembly protein -
OPU52_RS28635 (OPU52_28630) 73079..73750 + 672 WP_000575345.1 EAL domain-containing protein -
OPU52_RS28640 (OPU52_28635) 73750..74754 + 1005 WP_005507569.1 TraU family protein -
OPU52_RS28645 (OPU52_28640) 74870..77665 + 2796 WP_001256484.1 conjugal transfer mating pair stabilization protein TraN -
OPU52_RS28650 (OPU52_28645) 77704..78564 - 861 WP_000709517.1 hypothetical protein -
OPU52_RS28655 (OPU52_28650) 78687..79328 - 642 WP_000796664.1 hypothetical protein -
OPU52_RS28660 (OPU52_28655) 79623..79943 + 321 WP_000547566.1 hypothetical protein -
OPU52_RS28665 (OPU52_28660) 80247..80432 + 186 WP_001186917.1 hypothetical protein -
OPU52_RS28670 (OPU52_28665) 80652..81620 + 969 WP_000085160.1 CbbQ/NirQ/NorQ C-terminal domain-containing protein -
OPU52_RS28675 (OPU52_28670) 81631..82539 + 909 WP_000739139.1 hypothetical protein -
OPU52_RS28680 (OPU52_28675) 82600..83130 + 531 WP_000987165.1 single-stranded DNA-binding protein -
OPU52_RS28685 (OPU52_28680) 83225..84214 + 990 WP_001282585.1 phage recombination protein Bet -
OPU52_RS28690 (OPU52_28685) 84277..85287 + 1011 WP_000706865.1 YqaJ viral recombinase family protein -
OPU52_RS28695 (OPU52_28690) 85487..86764 + 1278 WP_000170087.1 DUF3150 domain-containing protein -
OPU52_RS28700 (OPU52_28695) 86849..88645 + 1797 WP_000039319.1 VWA domain-containing protein -
OPU52_RS28705 (OPU52_28700) 88707..89042 + 336 WP_001447572.1 hypothetical protein -
OPU52_RS28710 (OPU52_28705) 89307..89741 + 435 WP_004200877.1 hypothetical protein -
OPU52_RS28715 (OPU52_28710) 89796..89999 + 204 WP_000050847.1 hypothetical protein -
OPU52_RS28720 (OPU52_28715) 90071..90676 + 606 WP_000071870.1 5'-deoxynucleotidase -
OPU52_RS28725 (OPU52_28720) 90669..90938 + 270 WP_000184110.1 hypothetical protein -
OPU52_RS28730 (OPU52_28725) 90952..91170 + 219 WP_000260293.1 hypothetical protein -
OPU52_RS28735 (OPU52_28730) 91244..91801 + 558 WP_000064432.1 hypothetical protein -
OPU52_RS28740 (OPU52_28735) 91876..92727 + 852 WP_000595210.1 hypothetical protein -
OPU52_RS28745 (OPU52_28740) 93186..93572 + 387 WP_001077336.1 hypothetical protein -
OPU52_RS28750 (OPU52_28745) 93750..95477 + 1728 WP_000122922.1 toprim domain-containing protein -
OPU52_RS28755 (OPU52_28750) 95464..95742 + 279 WP_000268337.1 hypothetical protein -
OPU52_RS28760 (OPU52_28755) 95815..96036 + 222 WP_000714163.1 hypothetical protein -
OPU52_RS28765 (OPU52_28760) 96218..97222 - 1005 WP_000427620.1 IS110 family transposase IS4321 Transposase
OPU52_RS28770 (OPU52_28765) 97301..100273 - 2973 WP_023159963.1 Tn3 family transposase TnpA_TnAs3 Transposase
OPU52_RS28775 (OPU52_28770) 100276..100833 - 558 WP_001162012.1 Tn3 family transposase TnpR_TnAs2 Transposase
OPU52_RS28780 (OPU52_28775) 101130..102143 - 1014 WP_000845048.1 IS91 family transposase ISAzo26 Transposase
OPU52_RS28785 (OPU52_28780) 102374..102910 + 537 WP_269136673.1 Aminoglycoside N(6')-acetyltransferase type 1 ARG
OPU52_RS28790 (OPU52_28785) 102944..103641 + 698 WP_223174630.1 IS1 family transposase ISKpn14 Transposase
OPU52_RS28795 (OPU52_28790) 103850..104662 + 813 WP_063860861.1 Metallo-beta-lactamase type 2 ARG
OPU52_RS28800 (OPU52_28795) 104666..105031 + 366 WP_004201167.1 bleomycin binding protein Ble-MBL -
OPU52_RS28805 (OPU52_28800) 105036..105674 + 639 WP_004201168.1 phosphoribosylanthranilate isomerase -
OPU52_RS28810 (OPU52_28805) 105685..106242 - 558 Protein_128 twin-arginine translocation (TAT) pathway signal sequence domain protein -
OPU52_RS28815 (OPU52_28810) 106342..106716 - 375 Protein_129 protein-disulfide reductase DsbD family protein -
OPU52_RS28820 (OPU52_28815) 106721..107050 - 330 WP_004201171.1 divalent-cation tolerance protein CutA -
OPU52_RS28825 (OPU52_28820) 107244..107534 + 291 WP_004201172.1 co-chaperone GroES -
OPU52_RS28830 (OPU52_28825) 107590..109230 + 1641 WP_004201176.1 60 kDa chaperonin VF
OPU52_RS28835 (OPU52_28830) 109455..110021 + 567 Protein_133 IS91 family transposase ISPps1 Transposase
OPU52_RS28840 (OPU52_28835) 109993..112491 + 2499 Protein_134 tRNA(Glu)-specific nuclease WapA VF
OPU52_RS28845 (OPU52_28840) 112481..112903 + 423 WP_001165345.1 hypothetical protein -
OPU52_RS28850 (OPU52_28845) 113074..113526 + 453 WP_000791469.1 hypothetical protein -
OPU52_RS28855 (OPU52_28850) 113542..114144 - 603 WP_000278322.1 hypothetical protein -
OPU52_RS28860 (OPU52_28855) 114414..114695 + 282 WP_000575657.1 hypothetical protein -
OPU52_RS28865 (OPU52_28860) 114994..115530 + 537 WP_000949433.1 hypothetical protein -
OPU52_RS28870 (OPU52_28865) 115533..116543 + 1011 WP_000543934.1 IS91 family transposase ISWz1 Transposase
OPU52_RS28875 (OPU52_28870) 116548..117417 + 870 WP_004201184.1 3'-5' exonuclease -
OPU52_RS28880 (OPU52_28875) 117414..117905 + 492 WP_000139717.1 hypothetical protein -
OPU52_RS28885 (OPU52_28880) 118129..118842 - 714 WP_269136487.1 Methyl-accepting chemotaxis protein McpQ VF
OPU52_RS28890 (OPU52_28885) 119060..119764 + 705 WP_001067855.1 IS6 family transposase IS26 Transposase
OPU52_RS28895 (OPU52_28890) 119886..120791 + 906 WP_000219391.1 hypothetical protein ARG
OPU52_RS28900 (OPU52_28895) 120788..122026 + 1239 WP_000004159.1 macrolide resistance MFS transporter Mrx(A) -
OPU52_RS28905 (OPU52_28900) 122026..122610 + 585 WP_001137892.1 macrolide-binding transcriptional repressor MphR(A) -
OPU52_RS28910 (OPU52_28905) 123103..123867 - 765 WP_001389365.1 IS6 family transposase IS6100 Transposase
OPU52_RS28915 (OPU52_28910) 123985..124050 - 66 Protein_149 EAL domain-containing protein -
OPU52_RS28920 (OPU52_28915) 124094..124399 - 306 WP_000130000.1 hypothetical protein Relaxase
OPU52_RS28925 (OPU52_28920) 124410..125615 - 1206 WP_000184001.1 chromate efflux transporter -
OPU52_RS28930 (OPU52_28925) 125843..126847 + 1005 WP_048242288.1 IS110 family transposase IS4321 Transposase
OPU52_RS28935 (OPU52_28930) 127029..127301 - 273 WP_004883563.1 hypothetical protein -
OPU52_RS28940 (OPU52_28935) 127429..128268 - 840 WP_000259031.1 Dihydropteroate synthase ARG
OPU52_RS28945 (OPU52_28940) 128262..128609 - 348 WP_000679427.1 Multidrug transporter EmrE ARG
OPU52_RS28950 (OPU52_28945) 128650..128745 + 96 Protein_156 hypothetical protein -
OPU52_RS28955 (OPU52_28950) 128840..129484 + 645 WP_001749994.1 Pentapeptide repeat protein ARG
OPU52_RS28960 (OPU52_28955) 129576..130484 - 909 WP_001749993.1 putative oxidoreductase YghA VF
OPU52_RS28965 (OPU52_28960) 130949..132490 - 1542 WP_000050481.1 IS91 family transposase ISVsa3 Transposase
OPU52_RS28970 (OPU52_28965) 132895..133734 - 840 WP_000259031.1 Dihydropteroate synthase ARG
OPU52_RS28975 (OPU52_28970) 133728..134075 - 348 WP_000679427.1 Multidrug transporter EmrE ARG
OPU52_RS28980 (OPU52_28975) 134192..135037 - 846 WP_001749984.1 Streptomycin 3''-adenylyltransferase ARG
OPU52_RS28985 (OPU52_28980) 135218..135691 - 474 WP_001749985.1 Dihydrofolate reductase type 1 ARG
OPU52_RS28990 (OPU52_28985) 135824..136276 - 453 WP_001749986.1 hypothetical protein ARG
OPU52_RS28995 (OPU52_28990) 136373..136927 - 555 WP_063840321.1 Aminoglycoside N(6')-acetyltransferase type 1 ARG
OPU52_RS29000 (OPU52_28995) 137219..138232 + 1014 WP_000845048.1 IS91 family transposase ISAzo26 Transposase
OPU52_RS29005 (OPU52_29000) 138435..138785 + 351 WP_000454193.1 DUF3330 domain-containing protein -
OPU52_RS29010 (OPU52_29005) 138961..139521 + 561 WP_001161490.1 Tn3 family transposase TnpR_TnAs1 Transposase
OPU52_RS29015 (OPU52_29010) 139525..142491 + 2967 WP_269136488.1 Tn3 family transposase TnpA_TnAs1 Transposase
OPU52_RS29020 (OPU52_29015) 142812..143687 + 876 WP_001097010.1 DNA replication terminus site-binding protein -
OPU52_RS29025 (OPU52_29020) 143840..144880 + 1041 WP_000101568.1 DNA-binding protein -
OPU52_RS29030 (OPU52_29025) 145167..146678 + 1512 WP_000811656.1 UvrD-helicase domain-containing protein -
OPU52_RS29035 (OPU52_29030) 146789..147829 + 1041 WP_001326396.1 conjugal transfer protein TraF -
OPU52_RS29040 (OPU52_29035) 147831..149264 + 1434 WP_000256129.1 conjugal transfer protein TraH -
OPU52_RS29045 (OPU52_29040) 149277..152891 + 3615 WP_000534551.1 conjugal transfer protein TraG N-terminal domain-containing protein -
OPU52_RS29050 (OPU52_29045) 152929..153291 - 363 WP_000683483.1 hypothetical protein -
OPU52_RS29055 (OPU52_29050) 154007..154279 + 273 WP_000356489.1 helix-turn-helix domain-containing protein -
OPU52_RS29060 (OPU52_29055) 154279..154812 + 534 WP_000790610.1 transglycosylase SLT domain-containing protein -
OPU52_RS29065 (OPU52_29060) 154823..155431 + 609 WP_000891157.1 hypothetical protein -
OPU52_RS29070 (OPU52_29065) 155428..155979 + 552 WP_001020646.1 FlhC family transcriptional regulator -
OPU52_RS29075 (OPU52_29070) 156039..156458 - 420 WP_000651490.1 H-NS family nucleoid-associated regulatory protein -
OPU52_RS29080 (OPU52_29075) 156460..156753 - 294 WP_000919078.1 hypothetical protein -
OPU52_RS29085 (OPU52_29080) 156770..157753 - 984 WP_000077457.1 ParM/StbA family protein -
OPU52_RS29090 (OPU52_29085) 158252..158791 + 540 WP_001447712.1 conjugative transfer protein MobI(A/C) -

Similar MGE(s)


Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.

Detail Organism MGE type Related TA Genome accession Coordinates Mash
distance