MGE detailed information
MGE type: Conjugative plasmid MGE length: 70383 bp
Accession: NZ_CP113188 Location: 1..70383 Organism: Klebsiella pneumoniae strain SYCC2 Replicon: plasmid pSYCC2_4
Accession: NZ_CP113188 Location: 1..70383 Organism: Klebsiella pneumoniae strain SYCC2 Replicon: plasmid pSYCC2_4
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| OT482_RS02100 (1) | 1..858 | + | 858 | WP_032495102.1 | incFII family plasmid replication initiator RepA | - |
| OT482_RS02105 (1797) | 1797..2258 | + | 462 | WP_072643484.1 | histidine phosphatase family protein | - |
| OT482_RS02110 (2414) | 2414..3613 | - | 1200 | WP_000948429.1 | IS91 family transposase ISSbo1 | Transposase |
| OT482_RS02115 (3623) | 3623..3811 | - | 189 | WP_000957857.1 | hypothetical protein | - |
| OT482_RS02120 (3931) | 3931..5361 | + | 1431 | Protein_4 | IS4 family transposase IS50R | Transposase |
| OT482_RS02125 (5390) | 5390..6184 | + | 795 | WP_000572405.1 | Aminoglycoside 3'-phosphotransferase | ARG |
| OT482_RS02130 (6205) | 6205..6441 | + | 237 | Protein_6 | hypothetical protein | - |
| OT482_RS02135 (6491) | 6491..7195 | + | 705 | WP_001067858.1 | IS6 family transposase IS15DI | Transposase |
| OT482_RS02140 (7500) | 7500..8057 | + | 558 | WP_001235713.1 | Tn3 family transposase TnpR_Tn3 | Transposase |
| OT482_RS02145 (8240) | 8240..9100 | + | 861 | WP_000027057.1 | Beta-lactamase TEM | ARG |
| OT482_RS02150 (9270) | 9270..10025 | + | 756 | WP_012372818.1 | 16S rRNA (guanine(1405)-N(7))-methyltransferase | ARG |
| OT482_RS02155 (10151) | 10151..10855 | + | 705 | WP_001067858.1 | IS6 family transposase IS15DI | Transposase |
| OT482_RS02160 (10905) | 10905..11648 | + | 744 | Protein_12 | Beta-lactamase TEM | ARG |
| OT482_RS02165 (11818) | 11818..12573 | + | 756 | WP_012372818.1 | 16S rRNA (guanine(1405)-N(7))-methyltransferase | ARG |
| OT482_RS02170 (12699) | 12699..12773 | + | 75 | Protein_14 | IS6 family transposase | - |
| OT482_RS02175 (12823) | 12823..13527 | - | 705 | WP_001067858.1 | IS6 family transposase IS15DI | Transposase |
| OT482_RS02180 (13593) | 13593..13658 | + | 66 | Protein_16 | IS1 family transposase | - |
| OT482_RS02185 (15107) | 15107..15341 | + | 235 | Protein_17 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| OT482_RS02190 (15469) | 15469..15750 | + | 282 | WP_001333089.1 | hypothetical protein | - |
| OT482_RS02195 (15873) | 15873..16223 | - | 351 | WP_000361389.1 | plasmid partitioning/stability family protein | - |
| OT482_RS02200 (16226) | 16226..17188 | - | 963 | WP_000959884.1 | plasmid segregation protein ParM | - |
| OT482_RS02205 (17335) | 17335..17628 | + | 294 | WP_032146011.1 | hypothetical protein | - |
| OT482_RS02210 (17705) | 17705..18388 | + | 684 | WP_000085883.1 | DNA methylase | - |
| OT482_RS02215 (18389) | 18389..18610 | + | 222 | WP_001104881.1 | hypothetical protein | - |
| OT482_RS02220 (18624) | 18624..19058 | + | 435 | WP_000274503.1 | DUF1380 family protein | - |
| OT482_RS02225 (19109) | 19109..19885 | + | 777 | WP_001383963.1 | hypothetical protein | - |
| OT482_RS02230 (20303) | 20303..20728 | + | 426 | WP_001198928.1 | antirestriction protein | - |
| OT482_RS02235 (20775) | 20775..21197 | + | 423 | WP_000271762.1 | DUF1380 family protein | - |
| OT482_RS02240 (21194) | 21194..21385 | + | 192 | WP_001027493.1 | hypothetical protein | - |
| OT482_RS02245 (22423) | 22423..22653 | + | 231 | WP_000218642.1 | hypothetical protein | - |
| OT482_RS02250 (22705) | 22705..24066 | + | 1362 | WP_000170695.1 | DUF3560 domain-containing protein | - |
| OT482_RS02255 (24113) | 24113..24676 | + | 564 | WP_015059007.1 | class I SAM-dependent methyltransferase | - |
| OT482_RS02260 (24762) | 24762..25217 | - | 456 | Protein_32 | hypothetical protein | - |
| OT482_RS02265 (25519) | 25519..26046 | + | 528 | WP_000290834.1 | single-stranded DNA-binding protein | - |
| OT482_RS02270 (26104) | 26104..26337 | + | 234 | WP_000006003.1 | DUF905 family protein | - |
| OT482_RS02275 (26398) | 26398..28421 | + | 2024 | Protein_35 | ParB/RepB/Spo0J family partition protein | - |
| OT482_RS02280 (28490) | 28490..28924 | + | 435 | WP_000845953.1 | conjugation system SOS inhibitor PsiB | - |
| OT482_RS02285 (28921) | 28921..29640 | + | 720 | WP_001276217.1 | plasmid SOS inhibition protein A | - |
| - (29652) | 29652..29876 | + | 225 | NuclAT_0 | - | Antitoxin Detail |
| - (29652) | 29652..29876 | + | 225 | NuclAT_0 | - | Antitoxin Detail |
| - (29652) | 29652..29876 | + | 225 | NuclAT_0 | - | Antitoxin Detail |
| - (29652) | 29652..29876 | + | 225 | NuclAT_0 | - | Antitoxin Detail |
| OT482_RS02290 (29862) | 29862..30011 | + | 150 | Protein_38 | plasmid maintenance protein Mok | - |
| OT482_RS02295 (29953) | 29953..30078 | + | 126 | WP_001372321.1 | type I toxin-antitoxin system Hok family toxin | Toxin Detail |
| OT482_RS02300 (30397) | 30397..30693 | - | 297 | Protein_40 | hypothetical protein | - |
| OT482_RS02305 (30993) | 30993..31289 | + | 297 | WP_001272251.1 | hypothetical protein | - |
| OT482_RS02310 (31400) | 31400..32221 | + | 822 | WP_001234445.1 | DUF932 domain-containing protein | - |
| OT482_RS02315 (32518) | 32518..33165 | - | 648 | WP_015059008.1 | hypothetical protein | VF |
| OT482_RS02320 (33442) | 33442..33825 | + | 384 | WP_000124981.1 | conjugal transfer relaxosome DNA-binding protein TraM | - |
| OT482_RS02325 (34016) | 34016..34702 | + | 687 | WP_015059009.1 | PAS domain-containing protein | - |
| OT482_RS02330 (34796) | 34796..35023 | + | 228 | WP_001254386.1 | conjugal transfer relaxosome protein TraY | - |
| OT482_RS02335 (35057) | 35057..35422 | + | 366 | WP_021519752.1 | type IV conjugative transfer system pilin TraA | - |
| OT482_RS02340 (35437) | 35437..35748 | + | 312 | WP_000012106.1 | type IV conjugative transfer system protein TraL | - |
| OT482_RS02345 (35770) | 35770..36336 | + | 567 | WP_000399794.1 | type IV conjugative transfer system protein TraE | - |
| OT482_RS02350 (36323) | 36323..37051 | + | 729 | WP_001230787.1 | type-F conjugative transfer system secretin TraK | - |
| OT482_RS02355 (37051) | 37051..38478 | + | 1428 | WP_032297072.1 | F-type conjugal transfer pilus assembly protein TraB | - |
| OT482_RS02360 (38468) | 38468..39058 | + | 591 | WP_000002778.1 | conjugal transfer pilus-stabilizing protein TraP | - |
| OT482_RS02365 (39045) | 39045..39242 | + | 198 | WP_001324648.1 | conjugal transfer protein TrbD | - |
| OT482_RS02370 (39254) | 39254..39505 | + | 252 | WP_001038341.1 | conjugal transfer protein TrbG | - |
| OT482_RS02375 (39502) | 39502..40017 | + | 516 | WP_000809902.1 | type IV conjugative transfer system lipoprotein TraV | - |
| OT482_RS02380 (40152) | 40152..40373 | + | 222 | WP_001278692.1 | conjugal transfer protein TraR | - |
| OT482_RS02385 (40533) | 40533..43160 | + | 2628 | WP_015059012.1 | type IV secretion system protein TraC | - |
| OT482_RS02390 (43157) | 43157..43543 | + | 387 | WP_015059013.1 | type-F conjugative transfer system protein TrbI | - |
| OT482_RS02395 (43540) | 43540..44172 | + | 633 | WP_001203735.1 | type-F conjugative transfer system protein TraW | - |
| OT482_RS02400 (44169) | 44169..45161 | + | 993 | WP_000830838.1 | conjugal transfer pilus assembly protein TraU | - |
| OT482_RS02405 (45188) | 45188..45496 | + | 309 | WP_000412447.1 | hypothetical protein | - |
| OT482_RS02410 (45559) | 45559..46080 | + | 522 | WP_015059014.1 | hypothetical protein | - |
| OT482_RS02415 (46107) | 46107..46745 | + | 639 | WP_000087532.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| OT482_RS02420 (46742) | 46742..47113 | + | 372 | WP_000056336.1 | hypothetical protein | - |
| OT482_RS02425 (47139) | 47139..47561 | + | 423 | WP_001229309.1 | HNH endonuclease signature motif containing protein | - |
| OT482_RS02430 (47558) | 47558..49408 | + | 1851 | WP_015059015.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| OT482_RS02435 (49435) | 49435..49692 | + | 258 | WP_053913405.1 | conjugal transfer protein TrbE | - |
| OT482_RS02440 (49679) | 49679..50428 | + | 750 | WP_072354014.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| OT482_RS02445 (50589) | 50589..50825 | + | 237 | WP_000270010.1 | type-F conjugative transfer system pilin chaperone TraQ | - |
| OT482_RS02450 (50812) | 50812..51357 | + | 546 | WP_000059817.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| OT482_RS02455 (51347) | 51347..51661 | + | 315 | WP_001384255.1 | P-type conjugative transfer protein TrbJ | - |
| OT482_RS02460 (51615) | 51615..52007 | + | 393 | WP_000126338.1 | F-type conjugal transfer protein TrbF | - |
| OT482_RS02465 (51994) | 51994..53367 | + | 1374 | WP_000944325.1 | conjugal transfer pilus assembly protein TraH | - |
| OT482_RS02470 (53364) | 53364..56180 | + | 2817 | WP_015059018.1 | conjugal transfer mating-pair stabilization protein TraG | - |
| OT482_RS02475 (56213) | 56213..56734 | + | 522 | WP_000632668.1 | conjugal transfer entry exclusion protein TraS | - |
| OT482_RS02480 (56759) | 56759..57490 | + | 732 | WP_021559024.1 | conjugal transfer complement resistance protein TraT | - |
| OT482_RS02485 (57693) | 57693..58430 | + | 738 | WP_015059020.1 | hypothetical protein | - |
| OT482_RS02490 (58481) | 58481..60724 | + | 2244 | WP_072646483.1 | type IV conjugative transfer system coupling protein TraD | - |
| OT482_RS02495 (60724) | 60724..65994 | + | 5271 | WP_061093447.1 | Multifunctional conjugation protein TraI | Relaxase |
| OT482_RS02500 (66014) | 66014..66760 | + | 747 | WP_000205770.1 | conjugal transfer pilus acetylase TraX | - |
| OT482_RS02505 (66815) | 66815..67375 | + | 561 | WP_000139328.1 | fertility inhibition protein FinO | - |
| OT482_RS02510 (67507) | 67507..67707 | + | 201 | WP_015059022.1 | hypothetical protein | - |
| OT482_RS02515 (68093) | 68093..68692 | + | 600 | WP_032083981.1 | PIN domain-containing protein | - |
| OT482_RS02520 (68754) | 68754..69086 | + | 333 | WP_152916585.1 | hypothetical protein | - |
| - (69287) | 69287..69346 | - | 60 | NuclAT_1 | - | Antitoxin Detail |
| - (69287) | 69287..69346 | - | 60 | NuclAT_1 | - | Antitoxin Detail |
| - (69287) | 69287..69346 | - | 60 | NuclAT_1 | - | Antitoxin Detail |
| - (69287) | 69287..69346 | - | 60 | NuclAT_1 | - | Antitoxin Detail |
| OT482_RS02525 (69391) | 69391..69540 | + | 150 | WP_001312851.1 | Hok/Gef family protein | Toxin Detail |
| OT482_RS02530 (69824) | 69824..70072 | + | 249 | WP_000083837.1 | replication regulatory protein RepA | - |
| OT482_RS02535 (70187) | 70187..70371 | + | 185 | Protein_87 | protein CopA/IncA | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|