MGE detailed information
MGE type: Conjugative plasmid MGE length: 134385 bp
Accession: NZ_CP110959 Location: 1..134385 Organism: Klebsiella pneumoniae subsp. pneumoniae strain LC-395/19 Replicon: plasmid pIT-395-FIIK2_CZA
Accession: NZ_CP110959 Location: 1..134385 Organism: Klebsiella pneumoniae subsp. pneumoniae strain LC-395/19 Replicon: plasmid pIT-395-FIIK2_CZA
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NPY03_RS27470 (NPY03_27470) | 1..897 | + | 897 | WP_004152350.1 | RepB family plasmid replication initiator protein | - |
| NPY03_RS27475 (NPY03_27475) | 1219..2424 | + | 1206 | WP_004152349.1 | Plasmid partition protein A | VF |
| NPY03_RS27480 (NPY03_27480) | 2421..3395 | + | 975 | WP_004152348.1 | ParB family protein | - |
| NPY03_RS27485 (NPY03_27485) | 3772..4104 | + | 333 | WP_004152347.1 | hypothetical protein | - |
| NPY03_RS27490 (NPY03_27490) | 4329..4544 | + | 216 | WP_004227314.1 | hypothetical protein | - |
| NPY03_RS27495 (NPY03_27495) | 4656..6683 | + | 2028 | WP_004152345.1 | class I SAM-dependent DNA methyltransferase | - |
| NPY03_RS27500 (NPY03_27500) | 6680..7996 | + | 1317 | WP_004152344.1 | restriction endonuclease subunit S | - |
| NPY03_RS27505 (NPY03_27505) | 7997..11254 | + | 3258 | WP_004152343.1 | DEAD/DEAH box helicase family protein | - |
| NPY03_RS27510 (NPY03_27510) | 11259..12527 | + | 1269 | WP_004152342.1 | ISL3 family transposase ISKpn25 | Transposase |
| NPY03_RS27515 (NPY03_27515) | 12647..13120 | + | 474 | WP_004152341.1 | YkgJ family cysteine cluster protein | - |
| NPY03_RS27520 (NPY03_27520) | 13212..13442 | + | 231 | WP_011977773.1 | hypothetical protein | - |
| NPY03_RS27525 (NPY03_27525) | 14334..15116 | - | 783 | WP_004152340.1 | site-specific integrase | - |
| NPY03_RS27530 (NPY03_27530) | 15116..15448 | - | 333 | WP_004152339.1 | hypothetical protein | - |
| NPY03_RS27535 (NPY03_27535) | 15455..15853 | - | 399 | WP_004171440.1 | hypothetical protein | - |
| NPY03_RS27540 (NPY03_27540) | 15879..16208 | - | 330 | WP_004152337.1 | hypothetical protein | - |
| NPY03_RS27545 (NPY03_27545) | 16236..16544 | - | 309 | WP_004152336.1 | hypothetical protein | - |
| NPY03_RS27550 (NPY03_27550) | 17031..17492 | - | 462 | WP_072093212.1 | hypothetical protein | - |
| NPY03_RS27555 (NPY03_27555) | 17449..17679 | + | 231 | WP_001261282.1 | type II toxin-antitoxin system VapB family antitoxin | Antitoxin Detail |
| NPY03_RS27560 (NPY03_27560) | 17676..18092 | + | 417 | WP_001044770.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| NPY03_RS27565 (NPY03_27565) | 18166..18855 | + | 690 | Protein_19 | AAA family ATPase | - |
| NPY03_RS27570 (NPY03_27570) | 18910..19607 | + | 698 | WP_223174630.1 | IS1 family transposase ISKpn14 | Transposase |
| NPY03_RS27575 (NPY03_27575) | 19623..19733 | + | 111 | Protein_21 | mercuric transport protein periplasmic component | - |
| NPY03_RS27580 (NPY03_27580) | 19769..20191 | + | 423 | WP_001340589.1 | organomercurial transporter MerC | - |
| NPY03_RS27585 (NPY03_27585) | 20243..21937 | + | 1695 | WP_000105636.1 | mercury(II) reductase | - |
| NPY03_RS27590 (NPY03_27590) | 21955..22317 | + | 363 | WP_001277456.1 | mercury resistance co-regulator MerD | - |
| NPY03_RS27595 (NPY03_27595) | 22314..22550 | + | 237 | WP_000993386.1 | broad-spectrum mercury transporter MerE | - |
| NPY03_RS27600 (NPY03_27600) | 22586..23254 | + | 669 | WP_001300294.1 | putative signaling protein | VF |
| NPY03_RS27605 (NPY03_27605) | 23329..24579 | + | 1251 | Protein_27 | transposase | - |
| NPY03_RS27610 (NPY03_27610) | 24644..25015 | + | 372 | Protein_28 | IS6 family transposase IS15DII | Transposase |
| NPY03_RS27615 (NPY03_27615) | 25165..26025 | - | 861 | WP_000027057.1 | Beta-lactamase TEM | ARG |
| NPY03_RS27620 (NPY03_27620) | 26208..26525 | - | 318 | Protein_30 | Tn3 family transposase TnpR_Tn3 | Transposase |
| NPY03_RS27625 (NPY03_27625) | 26725..27549 | - | 825 | Protein_31 | OXA-9 family oxacillin-hydrolyzing class D beta-lactamase | - |
| NPY03_RS27630 (NPY03_27630) | 27609..27719 | - | 111 | Protein_32 | ANT(3'') family aminoglycoside nucleotidyltransferase | - |
| NPY03_RS27635 (NPY03_27635) | 27769..28473 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| NPY03_RS27640 (NPY03_27640) | 28546..31443 | + | 2898 | WP_004152403.1 | Tn3 family transposase TnpA_Tn5403 | Transposase |
| NPY03_RS27645 (NPY03_27645) | 31532..32152 | + | 621 | WP_004152402.1 | Tn3 family transposase TnpR_TnEc1 | Transposase |
| NPY03_RS27650 (NPY03_27650) | 32251..32661 | + | 411 | WP_004152401.1 | hypothetical protein | - |
| NPY03_RS27655 (NPY03_27655) | 33318..33677 | - | 360 | WP_004152400.1 | DUF305 domain-containing protein | - |
| NPY03_RS27660 (NPY03_27660) | 33849..34079 | - | 231 | Protein_38 | IS5 family transposase ISAeme7 | Transposase |
| NPY03_RS27665 (NPY03_27665) | 34181..35365 | + | 1185 | WP_004152398.1 | ISAs1 family transposase ISKpn31 | Transposase |
| NPY03_RS27670 (NPY03_27670) | 35642..36961 | + | 1320 | WP_004152397.1 | IS1182 family transposase ISKpn6 | Transposase |
| NPY03_RS27675 (NPY03_27675) | 37211..38092 | - | 882 | WP_004152396.1 | Carbapenem-hydrolyzing beta-lactamase KPC | ARG |
| NPY03_RS27680 (NPY03_27680) | 38380..39159 | - | 780 | WP_004152394.1 | IS21 family transposase ISKpn7 | Transposase |
| NPY03_RS27685 (NPY03_27685) | 39156..40181 | - | 1026 | WP_004199214.1 | IS21 family transposase ISKpn7 | Transposase |
| NPY03_RS27690 (NPY03_27690) | 40288..43317 | - | 3030 | WP_004152392.1 | Tn3 family transposase ISPsy42 | Transposase |
| NPY03_RS27695 (NPY03_27695) | 43427..45142 | + | 1716 | WP_004152391.1 | Tn3-like element Tn4401 family resolvase TnpR | - |
| NPY03_RS27700 (NPY03_27700) | 45437..45592 | + | 156 | WP_001404092.1 | hypothetical protein | - |
| NPY03_RS27705 (NPY03_27705) | 45641..46633 | + | 993 | WP_001145103.1 | hypothetical protein | - |
| NPY03_RS27710 (NPY03_27710) | 46690..46821 | + | 132 | Protein_48 | ISNCY family transposase | - |
| NPY03_RS27715 (NPY03_27715) | 47150..47701 | + | 552 | WP_004152384.1 | Cardiolipin synthase A | VF |
| NPY03_RS27720 (NPY03_27720) | 47819..48088 | + | 270 | WP_013609506.1 | replication regulatory protein RepA | - |
| NPY03_RS27725 (NPY03_27725) | 48320..48397 | + | 78 | WP_004171450.1 | RepA leader peptide Tap | - |
| NPY03_RS27730 (NPY03_27730) | 48390..49247 | + | 858 | WP_004152386.1 | incFII family plasmid replication initiator RepA | - |
| NPY03_RS27735 (NPY03_27735) | 50466..51029 | + | 564 | WP_004152388.1 | ProQ/FINO family protein | - |
| NPY03_RS27740 (NPY03_27740) | 51013..51624 | + | 612 | WP_004152389.1 | DUF2913 family protein | - |
| NPY03_RS27745 (NPY03_27745) | 51833..51964 | - | 132 | Protein_55 | ISNCY family transposase | - |
| NPY03_RS27750 (NPY03_27750) | 52021..53013 | - | 993 | WP_001145103.1 | hypothetical protein | - |
| NPY03_RS27755 (NPY03_27755) | 53062..53217 | - | 156 | WP_001404092.1 | hypothetical protein | - |
| NPY03_RS27760 (NPY03_27760) | 53512..55227 | - | 1716 | WP_004152391.1 | Tn3-like element Tn4401 family resolvase TnpR | - |
| NPY03_RS27765 (NPY03_27765) | 55337..58366 | + | 3030 | WP_004152392.1 | Tn3 family transposase ISPsy42 | Transposase |
| NPY03_RS27770 (NPY03_27770) | 58473..59498 | + | 1026 | WP_004199214.1 | IS21 family transposase ISKpn7 | Transposase |
| NPY03_RS27775 (NPY03_27775) | 59495..60274 | + | 780 | WP_004152394.1 | IS21 family transposase ISKpn7 | Transposase |
| NPY03_RS27780 (NPY03_27780) | 60562..61443 | + | 882 | WP_004152396.1 | Carbapenem-hydrolyzing beta-lactamase KPC | ARG |
| NPY03_RS27785 (NPY03_27785) | 61693..63012 | - | 1320 | WP_004152397.1 | IS1182 family transposase ISKpn6 | Transposase |
| NPY03_RS27790 (NPY03_27790) | 63289..64473 | - | 1185 | WP_004152398.1 | ISAs1 family transposase ISKpn31 | Transposase |
| NPY03_RS27795 (NPY03_27795) | 64575..64805 | + | 231 | Protein_65 | IS5 family transposase ISAeme7 | Transposase |
| NPY03_RS27800 (NPY03_27800) | 64977..65336 | + | 360 | WP_004152400.1 | DUF305 domain-containing protein | - |
| NPY03_RS27805 (NPY03_27805) | 65993..66403 | - | 411 | WP_004152401.1 | hypothetical protein | - |
| NPY03_RS27810 (NPY03_27810) | 66502..67122 | - | 621 | WP_004152402.1 | Tn3 family transposase TnpR_TnEc1 | Transposase |
| NPY03_RS27815 (NPY03_27815) | 67211..70108 | - | 2898 | WP_004152403.1 | Tn3 family transposase TnpA_Tn5403 | Transposase |
| NPY03_RS27820 (NPY03_27820) | 70181..70885 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| NPY03_RS27825 (NPY03_27825) | 70935..71045 | + | 111 | Protein_71 | ANT(3'') family aminoglycoside nucleotidyltransferase | - |
| NPY03_RS27830 (NPY03_27830) | 71105..71929 | + | 825 | Protein_72 | OXA-9 family oxacillin-hydrolyzing class D beta-lactamase | - |
| NPY03_RS27835 (NPY03_27835) | 72129..72446 | + | 318 | Protein_73 | Tn3 family transposase TnpR_Tn3 | Transposase |
| NPY03_RS27840 (NPY03_27840) | 72629..73489 | + | 861 | WP_000027057.1 | Beta-lactamase TEM | ARG |
| NPY03_RS27845 (NPY03_27845) | 73638..74009 | - | 372 | Protein_75 | hypothetical protein | - |
| NPY03_RS27850 (NPY03_27850) | 74059..74661 | - | 603 | WP_015060010.1 | PIN domain-containing protein | - |
| NPY03_RS27855 (NPY03_27855) | 74822..75415 | - | 594 | WP_004152380.1 | fertility inhibition protein FinO | - |
| NPY03_RS27860 (NPY03_27860) | 75487..76212 | - | 726 | WP_004152379.1 | type-F conjugative transfer system pilin acetylase TraX | - |
| NPY03_RS27865 (NPY03_27865) | 76293..81554 | - | 5262 | WP_073511618.1 | Multifunctional conjugation protein TraI | Relaxase |
| NPY03_RS27870 (NPY03_27870) | 81554..83866 | - | 2313 | WP_032495268.1 | type IV conjugative transfer system coupling protein TraD | - |
| NPY03_RS27875 (NPY03_27875) | 83995..84684 | - | 690 | WP_004198206.1 | hypothetical protein | - |
| NPY03_RS27880 (NPY03_27880) | 84876..85607 | - | 732 | WP_004152622.1 | conjugal transfer complement resistance protein TraT | - |
| NPY03_RS27885 (NPY03_27885) | 85791..86339 | - | 549 | WP_004152623.1 | conjugal transfer entry exclusion protein TraS | - |
| NPY03_RS27890 (NPY03_27890) | 86352..89201 | - | 2850 | WP_004152624.1 | conjugal transfer mating-pair stabilization protein TraG | - |
| NPY03_RS27895 (NPY03_27895) | 89201..90580 | - | 1380 | WP_004165169.1 | conjugal transfer pilus assembly protein TraH | - |
| NPY03_RS27900 (NPY03_27900) | 90558..91001 | - | 444 | WP_004152679.1 | F-type conjugal transfer protein TrbF | - |
| NPY03_RS27905 (NPY03_27905) | 91047..91604 | - | 558 | WP_004152678.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| NPY03_RS27910 (NPY03_27910) | 91576..91815 | - | 240 | WP_004144400.1 | type-F conjugative transfer system pilin chaperone TraQ | - |
| NPY03_RS27915 (NPY03_27915) | 91826..92578 | - | 753 | WP_004152677.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| NPY03_RS27920 (NPY03_27920) | 92599..92925 | - | 327 | WP_004152676.1 | hypothetical protein | - |
| NPY03_RS27925 (NPY03_27925) | 92938..93186 | - | 249 | WP_004152675.1 | hypothetical protein | - |
| NPY03_RS27930 (NPY03_27930) | 93164..93418 | - | 255 | WP_004152674.1 | conjugal transfer protein TrbE | - |
| NPY03_RS27935 (NPY03_27935) | 93450..95405 | - | 1956 | WP_004152673.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| NPY03_RS27940 (NPY03_27940) | 95464..96102 | - | 639 | WP_004152672.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| NPY03_RS27945 (NPY03_27945) | 96115..97104 | - | 990 | WP_011977785.1 | conjugal transfer pilus assembly protein TraU | - |
| NPY03_RS27950 (NPY03_27950) | 97101..97490 | - | 390 | WP_004152508.1 | hypothetical protein | - |
| NPY03_RS27955 (NPY03_27955) | 97532..98158 | - | 627 | WP_004152507.1 | type-F conjugative transfer system protein TraW | - |
| NPY03_RS27960 (NPY03_27960) | 98158..98547 | - | 390 | WP_004152506.1 | type-F conjugative transfer system protein TrbI | - |
| NPY03_RS27965 (NPY03_27965) | 98547..101186 | - | 2640 | WP_004152505.1 | type IV secretion system protein TraC | - |
| NPY03_RS27970 (NPY03_27970) | 101258..101656 | - | 399 | WP_011977783.1 | hypothetical protein | - |
| NPY03_RS27975 (NPY03_27975) | 101664..102053 | - | 390 | WP_004153076.1 | hypothetical protein | - |
| NPY03_RS27980 (NPY03_27980) | 102096..102500 | - | 405 | WP_004152503.1 | hypothetical protein | - |
| NPY03_RS27985 (NPY03_27985) | 102567..102878 | - | 312 | WP_004152502.1 | hypothetical protein | - |
| NPY03_RS27990 (NPY03_27990) | 102879..103097 | - | 219 | WP_004152501.1 | hypothetical protein | - |
| NPY03_RS27995 (NPY03_27995) | 103203..103613 | - | 411 | WP_004152499.1 | hypothetical protein | - |
| NPY03_RS28000 (NPY03_28000) | 103745..104329 | - | 585 | WP_004161368.1 | type IV conjugative transfer system lipoprotein TraV | - |
| NPY03_RS28005 (NPY03_28005) | 104443..105867 | - | 1425 | WP_004155033.1 | F-type conjugal transfer pilus assembly protein TraB | - |
| NPY03_RS28010 (NPY03_28010) | 105867..106607 | - | 741 | WP_004152497.1 | type-F conjugative transfer system secretin TraK | - |
| NPY03_RS28015 (NPY03_28015) | 106594..107160 | - | 567 | WP_004144423.1 | type IV conjugative transfer system protein TraE | - |
| NPY03_RS28020 (NPY03_28020) | 107180..107485 | - | 306 | WP_004144424.1 | type IV conjugative transfer system protein TraL | - |
| NPY03_RS28025 (NPY03_28025) | 107499..107867 | - | 369 | WP_004152496.1 | type IV conjugative transfer system pilin TraA | - |
| NPY03_RS28030 (NPY03_28030) | 107921..108307 | - | 387 | WP_004152495.1 | TraY domain-containing protein | - |
| NPY03_RS28035 (NPY03_28035) | 108386..109072 | - | 687 | WP_004152494.1 | transcriptional regulator TraJ family protein | - |
| NPY03_RS28040 (NPY03_28040) | 109246..109644 | - | 399 | WP_004152493.1 | conjugal transfer relaxosome DNA-binding protein TraM | - |
| NPY03_RS28045 (NPY03_28045) | 110066..110551 | + | 486 | WP_001568108.1 | hypothetical protein | VF |
| NPY03_RS28050 (NPY03_28050) | 110584..110913 | - | 330 | WP_011977736.1 | DUF5983 family protein | - |
| NPY03_RS28055 (NPY03_28055) | 110946..111767 | - | 822 | WP_004152492.1 | DUF932 domain-containing protein | - |
| NPY03_RS28060 (NPY03_28060) | 112587..113420 | - | 834 | WP_004152751.1 | N-6 DNA methylase | - |
| NPY03_RS28065 (NPY03_28065) | 113471..113617 | - | 147 | WP_004152750.1 | hypothetical protein | - |
| NPY03_RS28070 (NPY03_28070) | 113712..114059 | - | 348 | WP_004152749.1 | hypothetical protein | - |
| NPY03_RS28075 (NPY03_28075) | 114116..114469 | - | 354 | WP_004152748.1 | hypothetical protein | - |
| NPY03_RS28080 (NPY03_28080) | 115099..115449 | - | 351 | WP_004153414.1 | hypothetical protein | - |
| NPY03_RS28085 (NPY03_28085) | 115446..115718 | - | 273 | WP_004152661.1 | hypothetical protein | - |
| NPY03_RS28090 (NPY03_28090) | 115766..116125 | - | 360 | WP_004152660.1 | hypothetical protein | - |
| NPY03_RS28095 (NPY03_28095) | 116236..116559 | - | 324 | WP_004199367.1 | hypothetical protein | - |
| NPY03_RS28100 (NPY03_28100) | 116563..117285 | - | 723 | WP_004152658.1 | plasmid SOS inhibition protein A | - |
| NPY03_RS28105 (NPY03_28105) | 117282..117713 | - | 432 | WP_004152657.1 | conjugation system SOS inhibitor PsiB | - |
| NPY03_RS28110 (NPY03_28110) | 117759..119768 | - | 2010 | WP_004152656.1 | ParB/RepB/Spo0J family partition protein | - |
| NPY03_RS28115 (NPY03_28115) | 119837..120079 | - | 243 | WP_004152655.1 | DUF905 domain-containing protein | - |
| NPY03_RS28120 (NPY03_28120) | 120127..120639 | - | 513 | WP_004152654.1 | single-stranded DNA-binding protein | - |
| NPY03_RS28125 (NPY03_28125) | 121470..122033 | - | 564 | WP_004152756.1 | methyltransferase | - |
| NPY03_RS28130 (NPY03_28130) | 122081..123436 | - | 1356 | WP_013054814.1 | DUF3560 domain-containing protein | - |
| NPY03_RS28135 (NPY03_28135) | 123488..123718 | - | 231 | WP_001568051.1 | hypothetical protein | - |
| NPY03_RS28140 (NPY03_28140) | 123810..124037 | - | 228 | WP_004152790.1 | hypothetical protein | - |
| NPY03_RS28145 (NPY03_28145) | 124821..125138 | - | 318 | WP_004118473.1 | hypothetical protein | - |
| NPY03_RS28150 (NPY03_28150) | 125173..125427 | - | 255 | WP_004152357.1 | DNA polymerase III subunit theta | - |
| NPY03_RS28155 (NPY03_28155) | 125615..125806 | - | 192 | WP_001568047.1 | hypothetical protein | - |
| NPY03_RS28160 (NPY03_28160) | 125849..126355 | - | 507 | WP_001568046.1 | antirestriction protein ArdA | - |
| NPY03_RS28165 (NPY03_28165) | 126398..126826 | - | 429 | WP_004152356.1 | antirestriction protein | - |
| NPY03_RS28170 (NPY03_28170) | 127506..128273 | - | 768 | WP_001568044.1 | hypothetical protein | - |
| NPY03_RS28175 (NPY03_28175) | 128327..128746 | - | 420 | WP_001568043.1 | DUF1380 domain-containing protein | - |
| NPY03_RS28180 (NPY03_28180) | 128756..128977 | - | 222 | WP_001568042.1 | hypothetical protein | - |
| NPY03_RS28185 (NPY03_28185) | 128977..129678 | - | 702 | WP_004152355.1 | DNA methylase | - |
| NPY03_RS28190 (NPY03_28190) | 129750..129919 | - | 170 | Protein_144 | hypothetical protein | - |
| NPY03_RS28195 (NPY03_28195) | 130115..130345 | - | 231 | WP_001568040.1 | hypothetical protein | - |
| NPY03_RS28200 (NPY03_28200) | 130406..131077 | - | 672 | WP_004152354.1 | plasmid partitioning/stability family protein | - |
| NPY03_RS28205 (NPY03_28205) | 131080..132051 | - | 972 | WP_004152353.1 | plasmid segregation protein ParM | - |
| NPY03_RS28210 (NPY03_28210) | 132283..132714 | + | 432 | WP_004152352.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| NPY03_RS28215 (NPY03_28215) | 132714..133985 | + | 1272 | WP_004152351.1 | Y-family DNA polymerase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|