MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 93546 bp
Accession: NZ_CP110954 Location: 1..93546 Organism: Klebsiella pneumoniae subsp. pneumoniae strain LC-394/19 Replicon: plasmid pIT-394-FIB
Accession: NZ_CP110954 Location: 1..93546 Organism: Klebsiella pneumoniae subsp. pneumoniae strain LC-394/19 Replicon: plasmid pIT-394-FIB
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NPY09_RS27150 (NPY09_27150) | 1..1011 | + | 1011 | WP_004152063.1 | RepB family plasmid replication initiator protein | - |
| NPY09_RS27155 (NPY09_27155) | 1728..2468 | - | 741 | WP_001515717.1 | tyrosine-type recombinase/integrase | - |
| NPY09_RS27160 (NPY09_27160) | 3655..4635 | - | 981 | WP_000019473.1 | IS5 family transposase ISKpn26 | Transposase |
| NPY09_RS27165 (NPY09_27165) | 4627..5622 | + | 996 | WP_266025113.1 | IS5 family transposase IS903B | Transposase |
| NPY09_RS27170 (NPY09_27170) | 6295..6552 | - | 258 | WP_004197688.1 | hypothetical protein | - |
| NPY09_RS27175 (NPY09_27175) | 7193..7708 | + | 516 | Protein_5 | CSS-motif domain-containing protein | - |
| NPY09_RS27180 (NPY09_27180) | 7772..8608 | + | 837 | WP_004152068.1 | putative cyclic di-GMP phosphodiesterase PdeB | VF |
| NPY09_RS27185 (NPY09_27185) | 9591..10868 | - | 1278 | WP_004152070.1 | DUF2254 domain-containing protein | - |
| NPY09_RS27190 (NPY09_27190) | 10931..12928 | - | 1998 | WP_004178088.1 | choline BCCT transporter BetT | - |
| NPY09_RS27205 (NPY09_27205) | 15266..15750 | + | 485 | Protein_11 | IS1 family transposase IS1X2 | Transposase |
| NPY09_RS27210 (NPY09_27210) | 15766..16308 | + | 543 | Protein_12 | ISL3 family transposase ISKpn25 | Transposase |
| NPY09_RS27215 (NPY09_27215) | 16604..17035 | - | 432 | WP_004178091.1 | silver-binding protein SilE | - |
| NPY09_RS27220 (NPY09_27220) | 17286..18761 | - | 1476 | WP_003032875.1 | copper/silver sensor histidine kinase SilS | - |
| NPY09_RS27225 (NPY09_27225) | 18754..19434 | - | 681 | WP_001572351.1 | Transcriptional regulatory protein CusR | VF |
| NPY09_RS27230 (NPY09_27230) | 19624..21009 | + | 1386 | WP_000475512.1 | Cation efflux system protein CusC | VF |
| NPY09_RS27235 (NPY09_27235) | 21038..21391 | + | 354 | WP_001246153.1 | cation efflux system protein CusF | - |
| NPY09_RS27240 (NPY09_27240) | 21505..22797 | + | 1293 | WP_004152079.1 | Cu(+)/Ag(+) efflux RND transporter periplasmic adaptor subunit SilB | - |
| NPY09_RS27245 (NPY09_27245) | 22808..25954 | + | 3147 | WP_004098958.1 | Cu(+)/Ag(+) efflux RND transporter permease subunit SilA | - |
| NPY09_RS27250 (NPY09_27250) | 26041..26481 | + | 441 | WP_000758228.1 | DUF411 domain-containing protein | - |
| NPY09_RS27255 (NPY09_27255) | 26608..29055 | + | 2448 | WP_004098955.1 | Ag(+)-translocating P-type ATPase SilP | - |
| NPY09_RS27260 (NPY09_27260) | 29096..29293 | + | 198 | WP_000843497.1 | DUF2933 domain-containing protein | - |
| NPY09_RS27265 (NPY09_27265) | 29327..30064 | - | 738 | WP_004118669.1 | Murein DD-endopeptidase MepM | VF |
| NPY09_RS27270 (NPY09_27270) | 30353..30802 | - | 450 | WP_001023257.1 | copper resistance protein | - |
| NPY09_RS27275 (NPY09_27275) | 31036..32853 | + | 1818 | WP_004152083.1 | multicopper oxidase PcoA | - |
| NPY09_RS27280 (NPY09_27280) | 32859..33749 | + | 891 | WP_001378118.1 | copper resistance outer membrane transporter PcoB | - |
| NPY09_RS27285 (NPY09_27285) | 33789..34169 | + | 381 | WP_000025662.1 | copper resistance system metallochaperone PcoC | - |
| NPY09_RS27290 (NPY09_27290) | 34174..35103 | + | 930 | WP_004118344.1 | copper resistance inner membrane protein PcoD | - |
| NPY09_RS27295 (NPY09_27295) | 35158..35838 | + | 681 | WP_001188930.1 | Transcriptional activator protein CopR | VF |
| NPY09_RS27300 (NPY09_27300) | 35835..37235 | + | 1401 | WP_004152084.1 | copper resistance membrane spanning protein PcoS | - |
| NPY09_RS27305 (NPY09_27305) | 37452..37886 | + | 435 | WP_004152085.1 | copper resistance system metallochaperone PcoE | - |
| NPY09_RS27310 (NPY09_27310) | 38118..38297 | - | 180 | WP_004152086.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| NPY09_RS27315 (NPY09_27315) | 38358..39978 | - | 1621 | Protein_33 | ISL3 family transposase ISEc38 | Transposase |
| NPY09_RS27320 (NPY09_27320) | 40040..40549 | + | 510 | WP_031944101.1 | aquaporin | - |
| NPY09_RS27325 (NPY09_27325) | 40599..41096 | - | 498 | WP_004152091.1 | GNAT family N-acetyltransferase | - |
| NPY09_RS27330 (NPY09_27330) | 41428..41754 | + | 327 | WP_004152092.1 | metalloregulator ArsR/SmtB family transcription factor | - |
| NPY09_RS27335 (NPY09_27335) | 41751..42464 | + | 714 | WP_004152093.1 | arsenical resistance protein ArsH | - |
| NPY09_RS27340 (NPY09_27340) | 42473..43018 | + | 546 | WP_004182005.1 | sigma-70 family RNA polymerase sigma factor | - |
| NPY09_RS27345 (NPY09_27345) | 43094..43456 | + | 363 | WP_004152095.1 | arsenic metallochaperone ArsD family protein | - |
| NPY09_RS27350 (NPY09_27350) | 43481..45231 | + | 1751 | Protein_40 | arsenical pump-driving ATPase | - |
| NPY09_RS27355 (NPY09_27355) | 45353..45889 | + | 537 | WP_004152096.1 | GNAT family N-acetyltransferase | - |
| NPY09_RS27360 (NPY09_27360) | 45922..46347 | - | 426 | WP_004152097.1 | glutaredoxin-dependent arsenate reductase | - |
| NPY09_RS27365 (NPY09_27365) | 46360..47649 | - | 1290 | WP_004152098.1 | arsenite efflux transporter membrane subunit ArsB | - |
| NPY09_RS27370 (NPY09_27370) | 47697..49448 | - | 1752 | WP_004152099.1 | Arsenical pump-driving ATPase | VF |
| NPY09_RS27375 (NPY09_27375) | 49466..49828 | - | 363 | WP_004152100.1 | arsenite efflux transporter metallochaperone ArsD | - |
| NPY09_RS27380 (NPY09_27380) | 49878..50228 | - | 351 | WP_004152101.1 | As(III)-sensing metalloregulatory transcriptional repressor ArsR | - |
| NPY09_RS27385 (NPY09_27385) | 50586..50855 | + | 270 | WP_004152102.1 | hypothetical protein | - |
| NPY09_RS27390 (NPY09_27390) | 50843..51418 | + | 576 | WP_004152103.1 | hypothetical protein | - |
| NPY09_RS27395 (NPY09_27395) | 51449..51943 | + | 495 | WP_004152104.1 | DNA-binding protein | - |
| NPY09_RS27400 (NPY09_27400) | 51987..52355 | + | 369 | WP_004152105.1 | hypothetical protein | - |
| NPY09_RS27405 (NPY09_27405) | 52389..52592 | + | 204 | WP_004152106.1 | HHA domain-containing protein | - |
| NPY09_RS27410 (NPY09_27410) | 52641..52898 | + | 258 | WP_004152107.1 | hypothetical protein | - |
| NPY09_RS27415 (NPY09_27415) | 52974..53228 | + | 255 | WP_004152108.1 | hypothetical protein | - |
| NPY09_RS27420 (NPY09_27420) | 53404..53670 | + | 267 | WP_003026799.1 | DUF1778 domain-containing protein | Antitoxin Detail |
| NPY09_RS27425 (NPY09_27425) | 53658..54140 | + | 483 | WP_003026803.1 | GNAT family N-acetyltransferase | Toxin Detail |
| NPY09_RS27430 (NPY09_27430) | 54352..55698 | + | 1347 | WP_020314316.1 | ISNCY family transposase ISLad2 | Transposase |
| NPY09_RS27435 (NPY09_27435) | 55859..55990 | + | 132 | WP_004218042.1 | hypothetical protein | - |
| NPY09_RS27440 (NPY09_27440) | 56199..57364 | - | 1166 | Protein_58 | IS3 family transposase ISKpn38 | Transposase |
| NPY09_RS27445 (NPY09_27445) | 57541..58503 | - | 963 | WP_004152113.1 | zinc metalloprotease HtpX | - |
| NPY09_RS27450 (NPY09_27450) | 58490..58978 | - | 489 | WP_004152114.1 | phosphate-starvation-inducible PsiE family protein | - |
| NPY09_RS27455 (NPY09_27455) | 59093..59239 | - | 147 | Protein_61 | diguanylate cyclase | - |
| NPY09_RS27460 (NPY09_27460) | 59477..59674 | - | 198 | WP_004152115.1 | hypothetical protein | - |
| NPY09_RS27465 (NPY09_27465) | 59674..62469 | - | 2796 | WP_004152116.1 | ATP-dependent Clp protease ATP-binding subunit ClpC | VF |
| NPY09_RS27470 (NPY09_27470) | 62584..63153 | - | 570 | WP_004152117.1 | hypothetical protein | VF |
| NPY09_RS27475 (NPY09_27475) | 63188..63469 | - | 282 | WP_004152118.1 | helix-turn-helix domain-containing protein | - |
| NPY09_RS27480 (NPY09_27480) | 63713..63976 | - | 264 | WP_004118208.1 | hypothetical protein | - |
| NPY09_RS27485 (NPY09_27485) | 63991..64254 | + | 264 | WP_004118209.1 | IS66 family transposase ISPpu19 | Transposase |
| NPY09_RS27490 (NPY09_27490) | 64199..64315 | + | 117 | Protein_68 | transposase domain-containing protein | - |
| NPY09_RS27495 (NPY09_27495) | 64500..65197 | + | 698 | WP_223174644.1 | IS1 family transposase | - |
| NPY09_RS27500 (NPY09_27500) | 65456..66436 | + | 981 | WP_000019473.1 | IS5 family transposase ISKpn26 | Transposase |
| NPY09_RS27505 (NPY09_27505) | 67427..67840 | - | 414 | WP_004152722.1 | helix-turn-helix domain-containing protein | - |
| NPY09_RS27510 (NPY09_27510) | 67841..68119 | - | 279 | WP_004152721.1 | helix-turn-helix transcriptional regulator | - |
| NPY09_RS27515 (NPY09_27515) | 68109..68429 | - | 321 | WP_004152720.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| NPY09_RS27520 (NPY09_27520) | 68510..68734 | - | 225 | WP_004152719.1 | hypothetical protein | - |
| NPY09_RS27525 (NPY09_27525) | 68745..68957 | - | 213 | WP_004152718.1 | hypothetical protein | - |
| NPY09_RS27530 (NPY09_27530) | 69018..69374 | - | 357 | WP_004152717.1 | hypothetical protein | - |
| NPY09_RS27535 (NPY09_27535) | 70010..70360 | - | 351 | WP_004152758.1 | hypothetical protein | - |
| NPY09_RS27540 (NPY09_27540) | 70357..70629 | - | 273 | WP_004152759.1 | hypothetical protein | - |
| NPY09_RS27545 (NPY09_27545) | 71329..71490 | - | 162 | WP_004118124.1 | type I toxin-antitoxin system Hok family toxin | - |
| NPY09_RS27550 (NPY09_27550) | 71562..72641 | + | 1080 | WP_004220208.1 | IS481 family transposase ISKpn28 | Transposase |
| NPY09_RS27555 (NPY09_27555) | 72819..73193 | - | 375 | WP_004152638.1 | hypothetical protein | - |
| NPY09_RS27560 (NPY09_27560) | 73249..73575 | - | 327 | WP_004152639.1 | hypothetical protein | - |
| NPY09_RS27565 (NPY09_27565) | 73572..74300 | - | 729 | WP_004152640.1 | plasmid SOS inhibition protein A | - |
| NPY09_RS27570 (NPY09_27570) | 74297..74728 | - | 432 | WP_004152641.1 | conjugation system SOS inhibitor PsiB | - |
| NPY09_RS27575 (NPY09_27575) | 74773..76831 | - | 2059 | Protein_85 | ParB/RepB/Spo0J family partition protein | - |
| NPY09_RS27580 (NPY09_27580) | 76901..77149 | - | 249 | WP_004152643.1 | DUF905 domain-containing protein | - |
| NPY09_RS27585 (NPY09_27585) | 77198..77740 | - | 543 | WP_004152644.1 | single-stranded DNA-binding protein | - |
| NPY09_RS27590 (NPY09_27590) | 78516..79079 | - | 564 | WP_004152645.1 | methyltransferase | - |
| NPY09_RS27595 (NPY09_27595) | 79127..80482 | - | 1356 | WP_004220563.1 | DUF3560 domain-containing protein | - |
| NPY09_RS27600 (NPY09_27600) | 80534..80764 | - | 231 | WP_001568051.1 | hypothetical protein | - |
| NPY09_RS27605 (NPY09_27605) | 80856..81083 | - | 228 | WP_004152790.1 | hypothetical protein | - |
| NPY09_RS27610 (NPY09_27610) | 81867..82184 | - | 318 | WP_004118473.1 | hypothetical protein | - |
| NPY09_RS27615 (NPY09_27615) | 82219..82473 | - | 255 | WP_004152754.1 | DNA polymerase III subunit theta | - |
| NPY09_RS27620 (NPY09_27620) | 82710..83135 | - | 426 | WP_004118478.1 | antirestriction protein | - |
| NPY09_RS27625 (NPY09_27625) | 83656..83886 | - | 231 | WP_004152753.1 | hypothetical protein | - |
| NPY09_RS27630 (NPY09_27630) | 84120..85607 | - | 1488 | WP_004178082.1 | group II intron reverse transcriptase/maturase | - |
| NPY09_RS27635 (NPY09_27635) | 86010..86435 | + | 426 | WP_004178083.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| NPY09_RS27640 (NPY09_27640) | 86435..87706 | + | 1272 | WP_004152715.1 | Y-family DNA polymerase | - |
| NPY09_RS27645 (NPY09_27645) | 87845..88000 | + | 156 | WP_001776126.1 | hypothetical protein | - |
| NPY09_RS27650 (NPY09_27650) | 88023..89221 | - | 1199 | Protein_100 | IS200-IS605 family transposase IS609 | Transposase |
| NPY09_RS27655 (NPY09_27655) | 90658..91629 | - | 972 | WP_004152062.1 | ParB/RepB/Spo0J family plasmid partition protein | - |
| NPY09_RS27660 (NPY09_27660) | 91629..92795 | - | 1167 | WP_000523813.1 | hypothetical protein | VF |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|