MGE detailed information
MGE type: Conjugative plasmid MGE length: 134385 bp
Accession: NZ_CP110953 Location: 1..134385 Organism: Klebsiella pneumoniae subsp. pneumoniae strain LC-394/19 Replicon: plasmid pIT-394-FIIK2_CZA
Accession: NZ_CP110953 Location: 1..134385 Organism: Klebsiella pneumoniae subsp. pneumoniae strain LC-394/19 Replicon: plasmid pIT-394-FIIK2_CZA
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NPY09_RS26405 (NPY09_26405) | 1..897 | + | 897 | WP_004152350.1 | RepB family plasmid replication initiator protein | - |
| NPY09_RS26410 (NPY09_26410) | 1219..2424 | + | 1206 | WP_004152349.1 | Plasmid partition protein A | VF |
| NPY09_RS26415 (NPY09_26415) | 2421..3395 | + | 975 | WP_004152348.1 | ParB family protein | - |
| NPY09_RS26420 (NPY09_26420) | 3772..4104 | + | 333 | WP_004152347.1 | hypothetical protein | - |
| NPY09_RS26425 (NPY09_26425) | 4329..4544 | + | 216 | WP_004227314.1 | hypothetical protein | - |
| NPY09_RS26430 (NPY09_26430) | 4656..6683 | + | 2028 | WP_004152345.1 | class I SAM-dependent DNA methyltransferase | - |
| NPY09_RS26435 (NPY09_26435) | 6680..7996 | + | 1317 | WP_004152344.1 | restriction endonuclease subunit S | - |
| NPY09_RS26440 (NPY09_26440) | 7997..11254 | + | 3258 | WP_004152343.1 | DEAD/DEAH box helicase family protein | - |
| NPY09_RS26445 (NPY09_26445) | 11259..12527 | + | 1269 | WP_004152342.1 | ISL3 family transposase ISKpn25 | Transposase |
| NPY09_RS26450 (NPY09_26450) | 12647..13120 | + | 474 | WP_004152341.1 | YkgJ family cysteine cluster protein | - |
| NPY09_RS26455 (NPY09_26455) | 13212..13442 | + | 231 | WP_011977773.1 | hypothetical protein | - |
| NPY09_RS26460 (NPY09_26460) | 14334..15116 | - | 783 | WP_004152340.1 | site-specific integrase | - |
| NPY09_RS26465 (NPY09_26465) | 15116..15448 | - | 333 | WP_004152339.1 | hypothetical protein | - |
| NPY09_RS26470 (NPY09_26470) | 15455..15853 | - | 399 | WP_004171440.1 | hypothetical protein | - |
| NPY09_RS26475 (NPY09_26475) | 15879..16208 | - | 330 | WP_004152337.1 | hypothetical protein | - |
| NPY09_RS26480 (NPY09_26480) | 16236..16544 | - | 309 | WP_004152336.1 | hypothetical protein | - |
| NPY09_RS26485 (NPY09_26485) | 17031..17492 | - | 462 | WP_072093212.1 | hypothetical protein | - |
| NPY09_RS26490 (NPY09_26490) | 17449..17679 | + | 231 | WP_001261282.1 | type II toxin-antitoxin system VapB family antitoxin | Antitoxin Detail |
| NPY09_RS26495 (NPY09_26495) | 17676..18092 | + | 417 | WP_001044770.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| NPY09_RS26500 (NPY09_26500) | 18166..18855 | + | 690 | Protein_19 | AAA family ATPase | - |
| NPY09_RS26505 (NPY09_26505) | 18910..19607 | + | 698 | WP_223174630.1 | IS1 family transposase ISKpn14 | Transposase |
| NPY09_RS26510 (NPY09_26510) | 19623..19733 | + | 111 | Protein_21 | mercuric transport protein periplasmic component | - |
| NPY09_RS26515 (NPY09_26515) | 19769..20191 | + | 423 | WP_001340589.1 | organomercurial transporter MerC | - |
| NPY09_RS26520 (NPY09_26520) | 20243..21937 | + | 1695 | WP_000105636.1 | mercury(II) reductase | - |
| NPY09_RS26525 (NPY09_26525) | 21955..22317 | + | 363 | WP_001277456.1 | mercury resistance co-regulator MerD | - |
| NPY09_RS26530 (NPY09_26530) | 22314..22550 | + | 237 | WP_000993386.1 | broad-spectrum mercury transporter MerE | - |
| NPY09_RS26535 (NPY09_26535) | 22586..23254 | + | 669 | WP_001300294.1 | putative signaling protein | VF |
| NPY09_RS26540 (NPY09_26540) | 23329..24579 | + | 1251 | Protein_27 | transposase | - |
| NPY09_RS26545 (NPY09_26545) | 24644..25015 | + | 372 | Protein_28 | IS6 family transposase IS15DII | Transposase |
| NPY09_RS26550 (NPY09_26550) | 25165..26025 | - | 861 | WP_000027057.1 | Beta-lactamase TEM | ARG |
| NPY09_RS26555 (NPY09_26555) | 26208..26525 | - | 318 | Protein_30 | recombinase family protein | - |
| NPY09_RS26560 (NPY09_26560) | 26725..27549 | - | 825 | Protein_31 | OXA-9 family oxacillin-hydrolyzing class D beta-lactamase | - |
| NPY09_RS26565 (NPY09_26565) | 27609..27719 | - | 111 | Protein_32 | ANT(3'') family aminoglycoside nucleotidyltransferase | - |
| NPY09_RS26570 (NPY09_26570) | 27769..28473 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| NPY09_RS26575 (NPY09_26575) | 28546..31443 | + | 2898 | WP_004152403.1 | Tn3 family transposase TnpA_Tn5403 | Transposase |
| NPY09_RS26580 (NPY09_26580) | 31532..32152 | + | 621 | WP_004152402.1 | Tn3 family transposase TnpR_TnEc1 | Transposase |
| NPY09_RS26585 (NPY09_26585) | 32251..32661 | + | 411 | WP_004152401.1 | hypothetical protein | - |
| NPY09_RS26590 (NPY09_26590) | 33318..33677 | - | 360 | WP_004152400.1 | DUF305 domain-containing protein | - |
| NPY09_RS26595 (NPY09_26595) | 33849..34079 | - | 231 | Protein_38 | IS5 family transposase ISAeme7 | Transposase |
| NPY09_RS26600 (NPY09_26600) | 34181..35365 | + | 1185 | WP_004152398.1 | ISAs1 family transposase ISKpn31 | Transposase |
| NPY09_RS26605 (NPY09_26605) | 35642..36961 | + | 1320 | WP_004152397.1 | IS1182 family transposase ISKpn6 | Transposase |
| NPY09_RS26610 (NPY09_26610) | 37211..38092 | - | 882 | WP_004152396.1 | Carbapenem-hydrolyzing beta-lactamase KPC | ARG |
| NPY09_RS26615 (NPY09_26615) | 38380..39159 | - | 780 | WP_004152394.1 | IS21 family transposase ISKpn7 | Transposase |
| NPY09_RS26620 (NPY09_26620) | 39156..40181 | - | 1026 | WP_004199214.1 | IS21 family transposase ISKpn7 | Transposase |
| NPY09_RS26625 (NPY09_26625) | 40288..43317 | - | 3030 | WP_004152392.1 | Tn3 family transposase ISPsy42 | Transposase |
| NPY09_RS26630 (NPY09_26630) | 43427..45142 | + | 1716 | WP_004152391.1 | Tn3-like element Tn4401 family resolvase TnpR | - |
| NPY09_RS26635 (NPY09_26635) | 45437..45592 | + | 156 | WP_001404092.1 | hypothetical protein | - |
| NPY09_RS26640 (NPY09_26640) | 45641..46633 | + | 993 | WP_001145103.1 | hypothetical protein | - |
| NPY09_RS26645 (NPY09_26645) | 46690..46821 | + | 132 | Protein_48 | ISNCY family transposase | - |
| NPY09_RS26650 (NPY09_26650) | 47030..47641 | - | 612 | WP_004152389.1 | DUF2913 family protein | - |
| NPY09_RS26655 (NPY09_26655) | 47625..48188 | - | 564 | WP_004152388.1 | ProQ/FINO family protein | - |
| NPY09_RS26660 (NPY09_26660) | 49407..50264 | - | 858 | WP_004152386.1 | incFII family plasmid replication initiator RepA | - |
| NPY09_RS26665 (NPY09_26665) | 50566..50835 | - | 270 | WP_013609506.1 | replication regulatory protein RepA | - |
| NPY09_RS26670 (NPY09_26670) | 50953..51504 | - | 552 | WP_004152384.1 | Cardiolipin synthase A | VF |
| NPY09_RS26675 (NPY09_26675) | 51833..51964 | - | 132 | Protein_54 | ISNCY family transposase | - |
| NPY09_RS26680 (NPY09_26680) | 52021..53013 | - | 993 | WP_001145103.1 | hypothetical protein | - |
| NPY09_RS26685 (NPY09_26685) | 53062..53217 | - | 156 | WP_001404092.1 | hypothetical protein | - |
| NPY09_RS26690 (NPY09_26690) | 53512..55227 | - | 1716 | WP_004152391.1 | Tn3-like element Tn4401 family resolvase TnpR | - |
| NPY09_RS26695 (NPY09_26695) | 55337..58366 | + | 3030 | WP_004152392.1 | Tn3 family transposase ISPsy42 | Transposase |
| NPY09_RS26700 (NPY09_26700) | 58473..59498 | + | 1026 | WP_004199214.1 | IS21 family transposase ISKpn7 | Transposase |
| NPY09_RS26705 (NPY09_26705) | 59495..60274 | + | 780 | WP_004152394.1 | IS21 family transposase ISKpn7 | Transposase |
| NPY09_RS26710 (NPY09_26710) | 60562..61443 | + | 882 | WP_004152396.1 | Carbapenem-hydrolyzing beta-lactamase KPC | ARG |
| NPY09_RS26715 (NPY09_26715) | 61693..63012 | - | 1320 | WP_004152397.1 | IS1182 family transposase ISKpn6 | Transposase |
| NPY09_RS26720 (NPY09_26720) | 63289..64473 | - | 1185 | WP_004152398.1 | ISAs1 family transposase ISKpn31 | Transposase |
| NPY09_RS26725 (NPY09_26725) | 64575..64805 | + | 231 | Protein_64 | IS5 family transposase ISAeme7 | Transposase |
| NPY09_RS26730 (NPY09_26730) | 64977..65336 | + | 360 | WP_004152400.1 | DUF305 domain-containing protein | - |
| NPY09_RS26735 (NPY09_26735) | 65993..66403 | - | 411 | WP_004152401.1 | hypothetical protein | - |
| NPY09_RS26740 (NPY09_26740) | 66502..67122 | - | 621 | WP_004152402.1 | Tn3 family transposase TnpR_TnEc1 | Transposase |
| NPY09_RS26745 (NPY09_26745) | 67211..70108 | - | 2898 | WP_004152403.1 | Tn3 family transposase TnpA_Tn5403 | Transposase |
| NPY09_RS26750 (NPY09_26750) | 70181..70885 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| NPY09_RS26755 (NPY09_26755) | 70935..71045 | + | 111 | Protein_70 | ANT(3'') family aminoglycoside nucleotidyltransferase | - |
| NPY09_RS26760 (NPY09_26760) | 71105..71929 | + | 825 | Protein_71 | OXA-9 family oxacillin-hydrolyzing class D beta-lactamase | - |
| NPY09_RS26765 (NPY09_26765) | 72129..72446 | + | 318 | Protein_72 | recombinase family protein | - |
| NPY09_RS26770 (NPY09_26770) | 72629..73489 | + | 861 | WP_000027057.1 | Beta-lactamase TEM | ARG |
| NPY09_RS26775 (NPY09_26775) | 73638..74009 | - | 372 | Protein_74 | hypothetical protein | - |
| NPY09_RS26780 (NPY09_26780) | 74059..74661 | - | 603 | WP_015060010.1 | PIN domain-containing protein | - |
| NPY09_RS26785 (NPY09_26785) | 74822..75415 | - | 594 | WP_004152380.1 | fertility inhibition protein FinO | - |
| NPY09_RS26790 (NPY09_26790) | 75487..76212 | - | 726 | WP_004152379.1 | type-F conjugative transfer system pilin acetylase TraX | - |
| NPY09_RS26795 (NPY09_26795) | 76293..81554 | - | 5262 | WP_073511618.1 | Multifunctional conjugation protein TraI | Relaxase |
| NPY09_RS26800 (NPY09_26800) | 81554..83866 | - | 2313 | WP_032495268.1 | type IV conjugative transfer system coupling protein TraD | - |
| NPY09_RS26805 (NPY09_26805) | 83995..84684 | - | 690 | WP_004198206.1 | hypothetical protein | - |
| NPY09_RS26810 (NPY09_26810) | 84876..85607 | - | 732 | WP_004152622.1 | conjugal transfer complement resistance protein TraT | - |
| NPY09_RS26815 (NPY09_26815) | 85791..86339 | - | 549 | WP_004152623.1 | conjugal transfer entry exclusion protein TraS | - |
| NPY09_RS26820 (NPY09_26820) | 86352..89201 | - | 2850 | WP_004152624.1 | conjugal transfer mating-pair stabilization protein TraG | - |
| NPY09_RS26825 (NPY09_26825) | 89201..90580 | - | 1380 | WP_004165169.1 | conjugal transfer pilus assembly protein TraH | - |
| NPY09_RS26830 (NPY09_26830) | 90558..91001 | - | 444 | WP_004152679.1 | F-type conjugal transfer protein TrbF | - |
| NPY09_RS26835 (NPY09_26835) | 91047..91604 | - | 558 | WP_004152678.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| NPY09_RS26840 (NPY09_26840) | 91576..91815 | - | 240 | WP_004144400.1 | type-F conjugative transfer system pilin chaperone TraQ | - |
| NPY09_RS26845 (NPY09_26845) | 91826..92578 | - | 753 | WP_004152677.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| NPY09_RS26850 (NPY09_26850) | 92599..92925 | - | 327 | WP_004152676.1 | hypothetical protein | - |
| NPY09_RS26855 (NPY09_26855) | 92938..93186 | - | 249 | WP_004152675.1 | hypothetical protein | - |
| NPY09_RS26860 (NPY09_26860) | 93164..93418 | - | 255 | WP_004152674.1 | conjugal transfer protein TrbE | - |
| NPY09_RS26865 (NPY09_26865) | 93450..95405 | - | 1956 | WP_004152673.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| NPY09_RS26870 (NPY09_26870) | 95464..96102 | - | 639 | WP_004152672.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| NPY09_RS26875 (NPY09_26875) | 96115..97104 | - | 990 | WP_011977785.1 | conjugal transfer pilus assembly protein TraU | - |
| NPY09_RS26880 (NPY09_26880) | 97101..97490 | - | 390 | WP_004152508.1 | hypothetical protein | - |
| NPY09_RS26885 (NPY09_26885) | 97532..98158 | - | 627 | WP_004152507.1 | type-F conjugative transfer system protein TraW | - |
| NPY09_RS26890 (NPY09_26890) | 98158..98547 | - | 390 | WP_004152506.1 | type-F conjugative transfer system protein TrbI | - |
| NPY09_RS26895 (NPY09_26895) | 98547..101186 | - | 2640 | WP_004152505.1 | type IV secretion system protein TraC | - |
| NPY09_RS26900 (NPY09_26900) | 101258..101656 | - | 399 | WP_011977783.1 | hypothetical protein | - |
| NPY09_RS26905 (NPY09_26905) | 101664..102053 | - | 390 | WP_004153076.1 | hypothetical protein | - |
| NPY09_RS26910 (NPY09_26910) | 102096..102500 | - | 405 | WP_004152503.1 | hypothetical protein | - |
| NPY09_RS26915 (NPY09_26915) | 102567..102878 | - | 312 | WP_004152502.1 | hypothetical protein | - |
| NPY09_RS26920 (NPY09_26920) | 102879..103097 | - | 219 | WP_004152501.1 | hypothetical protein | - |
| NPY09_RS26925 (NPY09_26925) | 103203..103613 | - | 411 | WP_004152499.1 | hypothetical protein | - |
| NPY09_RS26930 (NPY09_26930) | 103745..104329 | - | 585 | WP_004161368.1 | type IV conjugative transfer system lipoprotein TraV | - |
| NPY09_RS26935 (NPY09_26935) | 104443..105867 | - | 1425 | WP_004155033.1 | F-type conjugal transfer pilus assembly protein TraB | - |
| NPY09_RS26940 (NPY09_26940) | 105867..106607 | - | 741 | WP_004152497.1 | type-F conjugative transfer system secretin TraK | - |
| NPY09_RS26945 (NPY09_26945) | 106594..107160 | - | 567 | WP_004144423.1 | type IV conjugative transfer system protein TraE | - |
| NPY09_RS26950 (NPY09_26950) | 107180..107485 | - | 306 | WP_004144424.1 | type IV conjugative transfer system protein TraL | - |
| NPY09_RS26955 (NPY09_26955) | 107499..107867 | - | 369 | WP_004152496.1 | type IV conjugative transfer system pilin TraA | - |
| NPY09_RS26960 (NPY09_26960) | 107921..108307 | - | 387 | WP_004152495.1 | TraY domain-containing protein | - |
| NPY09_RS26965 (NPY09_26965) | 108386..109072 | - | 687 | WP_004152494.1 | transcriptional regulator TraJ family protein | - |
| NPY09_RS26970 (NPY09_26970) | 109246..109644 | - | 399 | WP_004152493.1 | conjugal transfer relaxosome DNA-binding protein TraM | - |
| NPY09_RS26975 (NPY09_26975) | 110066..110551 | + | 486 | WP_001568108.1 | hypothetical protein | VF |
| NPY09_RS26980 (NPY09_26980) | 110584..110913 | - | 330 | WP_011977736.1 | DUF5983 family protein | - |
| NPY09_RS26985 (NPY09_26985) | 110946..111767 | - | 822 | WP_004152492.1 | DUF932 domain-containing protein | - |
| NPY09_RS26990 (NPY09_26990) | 112587..113420 | - | 834 | WP_004152751.1 | N-6 DNA methylase | - |
| NPY09_RS26995 (NPY09_26995) | 113471..113617 | - | 147 | WP_004152750.1 | hypothetical protein | - |
| NPY09_RS27000 (NPY09_27000) | 113712..114059 | - | 348 | WP_004152749.1 | hypothetical protein | - |
| NPY09_RS27005 (NPY09_27005) | 114116..114469 | - | 354 | WP_004152748.1 | hypothetical protein | - |
| NPY09_RS27010 (NPY09_27010) | 115099..115449 | - | 351 | WP_004153414.1 | hypothetical protein | - |
| NPY09_RS27015 (NPY09_27015) | 115446..115718 | - | 273 | WP_004152661.1 | hypothetical protein | - |
| NPY09_RS27020 (NPY09_27020) | 115766..116125 | - | 360 | WP_004152660.1 | hypothetical protein | - |
| NPY09_RS27025 (NPY09_27025) | 116236..116559 | - | 324 | WP_004199367.1 | hypothetical protein | - |
| NPY09_RS27030 (NPY09_27030) | 116563..117285 | - | 723 | WP_004152658.1 | plasmid SOS inhibition protein A | - |
| NPY09_RS27035 (NPY09_27035) | 117282..117713 | - | 432 | WP_004152657.1 | conjugation system SOS inhibitor PsiB | - |
| NPY09_RS27040 (NPY09_27040) | 117759..119768 | - | 2010 | WP_004152656.1 | ParB/RepB/Spo0J family partition protein | - |
| NPY09_RS27045 (NPY09_27045) | 119837..120079 | - | 243 | WP_004152655.1 | DUF905 domain-containing protein | - |
| NPY09_RS27050 (NPY09_27050) | 120127..120639 | - | 513 | WP_004152654.1 | single-stranded DNA-binding protein | - |
| NPY09_RS27055 (NPY09_27055) | 121470..122033 | - | 564 | WP_004152756.1 | methyltransferase | - |
| NPY09_RS27060 (NPY09_27060) | 122081..123436 | - | 1356 | WP_013054814.1 | DUF3560 domain-containing protein | - |
| NPY09_RS27065 (NPY09_27065) | 123488..123718 | - | 231 | WP_001568051.1 | hypothetical protein | - |
| NPY09_RS27070 (NPY09_27070) | 123810..124037 | - | 228 | WP_004152790.1 | hypothetical protein | - |
| NPY09_RS27075 (NPY09_27075) | 124821..125138 | - | 318 | WP_004118473.1 | hypothetical protein | - |
| NPY09_RS27080 (NPY09_27080) | 125173..125427 | - | 255 | WP_004152357.1 | DNA polymerase III subunit theta | - |
| NPY09_RS27085 (NPY09_27085) | 125615..125806 | - | 192 | WP_001568047.1 | hypothetical protein | - |
| NPY09_RS27090 (NPY09_27090) | 125849..126355 | - | 507 | WP_001568046.1 | antirestriction protein ArdA | - |
| NPY09_RS27095 (NPY09_27095) | 126398..126826 | - | 429 | WP_004152356.1 | antirestriction protein | - |
| NPY09_RS27100 (NPY09_27100) | 127506..128273 | - | 768 | WP_001568044.1 | hypothetical protein | - |
| NPY09_RS27105 (NPY09_27105) | 128327..128746 | - | 420 | WP_001568043.1 | DUF1380 domain-containing protein | - |
| NPY09_RS27110 (NPY09_27110) | 128756..128977 | - | 222 | WP_001568042.1 | hypothetical protein | - |
| NPY09_RS27115 (NPY09_27115) | 128977..129678 | - | 702 | WP_004152355.1 | DNA methylase | - |
| NPY09_RS27120 (NPY09_27120) | 129750..129919 | - | 170 | Protein_143 | hypothetical protein | - |
| NPY09_RS27125 (NPY09_27125) | 130115..130345 | - | 231 | WP_001568040.1 | hypothetical protein | - |
| NPY09_RS27130 (NPY09_27130) | 130406..131077 | - | 672 | WP_004152354.1 | plasmid partitioning/stability family protein | - |
| NPY09_RS27135 (NPY09_27135) | 131080..132051 | - | 972 | WP_004152353.1 | plasmid segregation protein ParM | - |
| NPY09_RS27140 (NPY09_27140) | 132283..132714 | + | 432 | WP_004152352.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| NPY09_RS27145 (NPY09_27145) | 132714..133985 | + | 1272 | WP_004152351.1 | Y-family DNA polymerase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|