MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 48379 bp
Accession: NZ_CP110887 Location: 4033545..4081923 Organism: Dickeya solani strain DsR207 Replicon: chromosome
Accession: NZ_CP110887 Location: 4033545..4081923 Organism: Dickeya solani strain DsR207 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| OQ522_RS17565 (OQ522_08320) | 4028831..4029505 | + | 675 | WP_022633092.1 | glutathione S-transferase family protein | - |
| OQ522_RS17570 (OQ522_08325) | 4029917..4030687 | - | 771 | WP_223849470.1 | alpha/beta hydrolase | - |
| OQ522_RS17575 (OQ522_08330) | 4030707..4031924 | - | 1218 | WP_022633094.1 | CocE/NonD family hydrolase | - |
| OQ522_RS17580 (OQ522_08335) | 4032326..4032613 | - | 288 | WP_146053333.1 | hypothetical protein | - |
| OQ522_RS17585 (OQ522_08340) | 4034076..4035140 | + | 1065 | WP_026594454.1 | DNA cytosine methyltransferase | - |
| OQ522_RS17590 (OQ522_08345) | 4035127..4038102 | + | 2976 | WP_022633096.1 | ATP-binding protein | - |
| OQ522_RS17595 (OQ522_08350) | 4038104..4039753 | + | 1650 | WP_022633097.1 | response regulator receiver domain | - |
| OQ522_RS17600 (OQ522_08355) | 4040114..4040515 | - | 402 | WP_023637748.1 | hypothetical protein | - |
| OQ522_RS17605 (OQ522_08360) | 4040579..4040872 | - | 294 | WP_146053334.1 | hypothetical protein | - |
| OQ522_RS17610 (OQ522_08365) | 4041263..4042207 | + | 945 | WP_022633099.1 | zincin-like metallopeptidase domain-containing protein | - |
| OQ522_RS17615 (OQ522_08370) | 4042528..4042764 | + | 237 | WP_022633100.1 | type II toxin-antitoxin system CcdA family antitoxin | Antitoxin Detail |
| OQ522_RS17620 (OQ522_08375) | 4042767..4043081 | + | 315 | WP_022633101.1 | CcdB family protein | Toxin Detail |
| OQ522_RS17625 (OQ522_08380) | 4043195..4043284 | - | 90 | Protein_3424 | mobilization protein mobC | - |
| OQ522_RS17630 (OQ522_08385) | 4043511..4044821 | - | 1311 | WP_223849471.1 | type II toxin-antitoxin system HipA family toxin | - |
| OQ522_RS17635 (OQ522_08390) | 4044818..4045225 | - | 408 | WP_071598628.1 | helix-turn-helix transcriptional regulator | - |
| OQ522_RS17640 (OQ522_08395) | 4045608..4046354 | - | 747 | WP_022633104.1 | MobC family replication-relaxation protein | - |
| OQ522_RS17645 (OQ522_08400) | 4046363..4048099 | - | 1737 | WP_223849475.1 | type IV secretory system conjugative DNA transfer family protein | - |
| OQ522_RS17650 (OQ522_08405) | 4048823..4049125 | - | 303 | WP_022633106.1 | TrbM/KikA/MpfK family conjugal transfer protein | - |
| OQ522_RS17655 (OQ522_08410) | 4049166..4050182 | - | 1017 | WP_022633107.1 | Type IV secretion system protein VirB11 | VF |
| OQ522_RS17660 (OQ522_08415) | 4050172..4051380 | - | 1209 | Protein_3431 | hypothetical protein | VF |
| OQ522_RS17665 (OQ522_08420) | 4051377..4052267 | - | 891 | WP_022633110.1 | P-type conjugative transfer protein VirB9 | - |
| OQ522_RS17670 (OQ522_08425) | 4052267..4052950 | - | 684 | WP_022633111.1 | Type IV secretion system protein PtlE | VF |
| OQ522_RS17675 (OQ522_08430) | 4053171..4054199 | - | 1029 | WP_022633112.1 | type IV secretion system protein | - |
| OQ522_RS17680 (OQ522_08435) | 4054211..4054435 | - | 225 | WP_022633113.1 | EexN family lipoprotein | - |
| OQ522_RS17685 (OQ522_08440) | 4054447..4055163 | - | 717 | WP_022633114.1 | type IV secretion system protein | - |
| OQ522_RS17690 (OQ522_08445) | 4055189..4057936 | - | 2748 | WP_022633115.1 | Type IV secretion system protein virB4 | VF |
| OQ522_RS17695 (OQ522_08450) | 4057946..4058221 | - | 276 | WP_012769221.1 | hypothetical protein | VF |
| OQ522_RS17700 (OQ522_08455) | 4058241..4058888 | - | 648 | WP_022633116.1 | hypothetical protein | VF |
| OQ522_RS17705 (OQ522_08460) | 4058958..4059191 | - | 234 | WP_022633117.1 | hypothetical protein | - |
| OQ522_RS17710 (OQ522_08465) | 4059757..4060272 | - | 516 | WP_022633118.1 | NAD(P)H-dependent oxidoreductase | - |
| OQ522_RS17715 (OQ522_08470) | 4060292..4061257 | - | 966 | WP_022633119.1 | aldo/keto reductase | - |
| OQ522_RS17720 (OQ522_08475) | 4061317..4062183 | - | 867 | WP_022633120.1 | SMP-30/gluconolactonase/LRE family protein | - |
| OQ522_RS17725 (OQ522_08480) | 4062266..4062739 | - | 474 | WP_022633121.1 | DMT family transporter | - |
| OQ522_RS17730 (OQ522_08485) | 4062751..4064148 | - | 1398 | WP_022633122.1 | amidohydrolase family protein | - |
| OQ522_RS17735 (OQ522_08490) | 4064280..4065164 | + | 885 | WP_022633123.1 | HTH-type transcriptional regulator PgrR | VF |
| OQ522_RS17740 (OQ522_08495) | 4065428..4065637 | - | 210 | WP_022633124.1 | TraR/DksA family transcriptional regulator | - |
| OQ522_RS17745 (OQ522_08500) | 4065627..4066211 | - | 585 | WP_022633125.1 | DUF2857 domain-containing protein | - |
| OQ522_RS17750 (OQ522_08505) | 4066228..4066422 | - | 195 | WP_022633126.1 | AlpA family transcriptional regulator | - |
| OQ522_RS17755 (OQ522_08510) | 4067098..4067355 | - | 258 | WP_012769229.1 | helix-turn-helix transcriptional regulator | - |
| OQ522_RS17760 (OQ522_08515) | 4067469..4067747 | - | 279 | WP_012884168.1 | hypothetical protein | VF |
| OQ522_RS17765 (OQ522_08520) | 4067881..4068168 | + | 288 | WP_022633127.1 | helix-turn-helix transcriptional regulator | - |
| OQ522_RS17770 (OQ522_08525) | 4068446..4068691 | - | 246 | WP_013318575.1 | helix-turn-helix transcriptional regulator | - |
| OQ522_RS17775 (OQ522_08530) | 4069375..4069893 | + | 519 | WP_022633128.1 | Major exported protein | VF |
| OQ522_RS17780 (OQ522_08535) | 4070006..4071868 | + | 1863 | WP_022633129.1 | Actin cross-linking toxin VgrG1 | VF |
| OQ522_RS17785 (OQ522_08540) | 4071886..4072386 | + | 501 | WP_022633130.1 | DUF1795 domain-containing protein | - |
| OQ522_RS17790 (OQ522_08545) | 4072404..4076591 | + | 4188 | WP_022633131.1 | RHS repeat-associated core domain-containing protein | - |
| OQ522_RS17795 (OQ522_08550) | 4076603..4077448 | + | 846 | WP_023637756.1 | hypothetical protein | - |
| OQ522_RS17800 (OQ522_08555) | 4077747..4077893 | + | 147 | WP_155246175.1 | hypothetical protein | - |
| OQ522_RS17805 (OQ522_08560) | 4078055..4078981 | - | 927 | WP_022633133.1 | hypothetical protein | - |
| OQ522_RS17810 (OQ522_08565) | 4079997..4080308 | + | 312 | WP_022633134.1 | DUF736 domain-containing protein | - |
| OQ522_RS17815 (OQ522_08570) | 4080464..4081746 | - | 1283 | Protein_3462 | Prophage integrase IntA ; Integrase | Integrase |
| OQ522_RS17825 (OQ522_08580) | 4082093..4082884 | - | 792 | WP_022633137.1 | DgsA anti-repressor MtfA | - |
| OQ522_RS17835 (OQ522_08590) | 4083747..4084898 | - | 1152 | WP_022633138.1 | type I restriction endonuclease | - |
| OQ522_RS17840 (OQ522_08595) | 4084932..4085321 | - | 390 | WP_023637758.1 | helix-turn-helix domain-containing protein | - |
| OQ522_RS17845 (OQ522_08600) | 4085749..4085916 | + | 168 | WP_022633139.1 | YqaE/Pmp3 family membrane protein | - |
| OQ522_RS17850 (OQ522_08605) | 4085989..4086543 | - | 555 | WP_022633140.1 | flavodoxin family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|