MGE detailed information
MGE type: Prophage MGE length: 33914 bp
Accession: NZ_CP110816 Location: 3523170..3557083 Organism: Escherichia coli strain THB42-F5 Replicon: chromosome
Accession: NZ_CP110816 Location: 3523170..3557083 Organism: Escherichia coli strain THB42-F5 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| N0566_RS17155 (3518270) | 3518270..3518967 | + | 698 | WP_094096600.1 | IS1-like element IS1A family transposase | - |
| N0566_RS17160 (3518976) | 3518976..3519068 | + | 93 | Protein_3351 | sigma factor-binding protein Crl | - |
| N0566_RS17165 (3519107) | 3519107..3520162 | - | 1056 | WP_000749863.1 | phosphoporin PhoE | - |
| N0566_RS17170 (3520450) | 3520450..3521553 | + | 1104 | WP_001285288.1 | glutamate 5-kinase | - |
| N0566_RS17175 (3521565) | 3521565..3522818 | + | 1254 | WP_000893278.1 | glutamate-5-semialdehyde dehydrogenase | - |
| N0566_RS17185 (3523390) | 3523390..3523731 | - | 342 | WP_000854672.1 | type IV toxin-antitoxin system toxin YkfI | Toxin Detail |
| N0566_RS17190 (3523752) | 3523752..3524069 | - | 318 | WP_000070395.1 | type IV toxin-antitoxin system antitoxin YafW | Antitoxin Detail |
| N0566_RS17195 (3524088) | 3524088..3524309 | - | 222 | WP_000691994.1 | DUF987 domain-containing protein | - |
| N0566_RS17200 (3524318) | 3524318..3524794 | - | 477 | WP_000811693.1 | RadC family protein | - |
| N0566_RS17205 (3524810) | 3524810..3525268 | - | 459 | WP_000211838.1 | antirestriction protein | - |
| N0566_RS17210 (3525366) | 3525366..3525605 | - | 240 | WP_000194654.1 | DUF905 family protein | - |
| N0566_RS17215 (3525682) | 3525682..3526149 | - | 468 | WP_001547765.1 | protein YkfB | - |
| N0566_RS17220 (3526172) | 3526172..3526615 | - | 444 | WP_000824223.1 | lipoprotein YafY | - |
| N0566_RS17225 (3526615) | 3526615..3526791 | - | 177 | WP_001285112.1 | hypothetical protein | - |
| N0566_RS17230 (3526838) | 3526838..3527029 | - | 192 | Protein_3364 | DeoR family transcriptional regulator | - |
| N0566_RS17235 (3527246) | 3527246..3528067 | - | 822 | WP_000197389.1 | DUF932 domain-containing protein | - |
| N0566_RS17240 (3528159) | 3528159..3529022 | - | 864 | WP_001065553.1 | GTPase family protein | - |
| N0566_RS17245 (3529351) | 3529351..3530244 | - | 894 | WP_000770246.1 | LysR substrate-binding domain-containing protein | - |
| N0566_RS17250 (3530340) | 3530340..3530597 | + | 258 | Protein_3368 | IS3 family transposase ISEc52 | Transposase |
| N0566_RS17255 (3530665) | 3530665..3531816 | + | 1152 | WP_001254932.1 | IS30 family transposase IS30D | Transposase |
| N0566_RS17260 (3531826) | 3531826..3532251 | + | 426 | Protein_3370 | IS3 family transposase | - |
| N0566_RS17265 (3532924) | 3532924..3534015 | + | 1092 | Protein_3371 | reverse transcriptase domain-containing protein | - |
| N0566_RS17270 (3534163) | 3534163..3535143 | - | 981 | WP_000019403.1 | IS5 family transposase IS5D | Transposase |
| N0566_RS17275 (3535387) | 3535387..3536790 | + | 1404 | WP_001393629.1 | S-methylmethionine permease | - |
| N0566_RS17280 (3536777) | 3536777..3537709 | + | 933 | WP_000081352.1 | homocysteine S-methyltransferase | - |
| N0566_RS17285 (3537818) | 3537818..3538864 | - | 1047 | WP_000192349.1 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | VF |
| N0566_RS17290 (3538876) | 3538876..3539223 | - | 348 | Protein_3376 | ABC transporter permease subunit | - |
| N0566_RS17300 (3539993) | 3539993..3540166 | + | 174 | Protein_3378 | IS30 family transposase | - |
| N0566_RS17305 (3540176) | 3540176..3540424 | - | 249 | Protein_3379 | IS3 family transposase ISEhe3 | Transposase |
| N0566_RS17310 (3540447) | 3540447..3540797 | - | 351 | WP_001030800.1 | type IV toxin-antitoxin system antitoxin YagB | - |
| N0566_RS17315 (3540811) | 3540811..3540876 | - | 66 | Protein_3381 | hypothetical protein | - |
| N0566_RS17320 (3540891) | 3540891..3542045 | - | 1155 | WP_010723086.1 | IS481 family transposase ISEc19 | Transposase |
| N0566_RS17325 (3542340) | 3542340..3543248 | + | 909 | WP_072647389.1 | 2-keto-3-deoxygluconate aldolase | - |
| N0566_RS17330 (3543263) | 3543263..3545230 | + | 1968 | WP_000151261.1 | xylonate dehydratase YagF | - |
| N0566_RS17335 (3545457) | 3545457..3546839 | + | 1383 | WP_000192863.1 | MFS transporter | - |
| N0566_RS17340 (3546851) | 3546851..3548461 | + | 1611 | WP_000406871.1 | glycoside hydrolase family 43 protein | - |
| N0566_RS17345 (3548466) | 3548466..3549224 | - | 759 | WP_001121657.1 | DNA-binding transcriptional repressor XynR | - |
| N0566_RS17350 (3549363) | 3549363..3550367 | - | 1005 | WP_001281825.1 | GMP reductase | VF |
| N0566_RS17355 (3550337) | 3550337..3550432 | - | 96 | WP_211180486.1 | putative translational regulatory protein ArgL | - |
| N0566_RS17360 (3550491) | 3550491..3550694 | + | 204 | Protein_3390 | DUF3987 domain-containing protein | - |
| N0566_RS17370 (3551562) | 3551562..3552293 | + | 732 | WP_000388269.1 | protein YagJ | - |
| N0566_RS17375 (3552384) | 3552384..3553010 | - | 627 | WP_000860996.1 | inovirus Gp2 family protein | - |
| N0566_RS17380 (3553282) | 3553282..3553980 | - | 699 | WP_001214248.1 | recombinase family protein | - |
| N0566_RS17385 (3554007) | 3554007..3554861 | - | 855 | WP_000072039.1 | protein YagM | - |
| N0566_RS17390 (3554980) | 3554980..3555204 | - | 225 | WP_001272156.1 | helix-turn-helix domain-containing protein | - |
| N0566_RS17395 (3555201) | 3555201..3555641 | - | 441 | WP_000224818.1 | protein YagN | - |
| N0566_RS17400 (3555758) | 3555758..3557158 | - | 1401 | WP_001407714.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| N0566_RS17405 (3557443) | 3557443..3557781 | - | 339 | Protein_3399 | LysR substrate-binding domain-containing protein | - |
| N0566_RS17410 (3557832) | 3557832..3558788 | - | 957 | WP_000121359.1 | molybdenum cofactor insertion chaperone PaoD | - |
| N0566_RS17415 (3558798) | 3558798..3560996 | - | 2199 | WP_000667026.1 | aldehyde oxidoreductase molybdenum-binding subunit PaoC | - |
| N0566_RS17420 (3560993) | 3560993..3561949 | - | 957 | WP_000643333.1 | aldehyde oxidoreductase FAD-binding subunit PaoB | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|