MGE detailed information
MGE type: IScluster/Tn MGE length: 22747 bp
Accession: NZ_CP110815 Location: 19141..41887 Organism: Escherichia coli strain THB42-F4 Replicon: plasmid pHB42-F4
Accession: NZ_CP110815 Location: 19141..41887 Organism: Escherichia coli strain THB42-F4 Replicon: plasmid pHB42-F4
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| N0552_RS22425 (14795) | 14795..18610 | + | 3816 | WP_226156939.1 | hypothetical protein | - |
| N0552_RS22430 (18946) | 18946..19694 | + | 749 | Protein_14 | ISKra4 family transposase ISEc51 | Transposase |
| N0552_RS22435 (20055) | 20055..20573 | - | 519 | WP_259904984.1 | DUF4238 domain-containing protein | - |
| N0552_RS22440 (20880) | 20880..21164 | + | 285 | WP_075858633.1 | ribbon-helix-helix protein, CopG family | Antitoxin Detail |
| N0552_RS22445 (21164) | 21164..21439 | + | 276 | WP_226156935.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| N0552_RS22450 (21546) | 21546..21749 | + | 204 | Protein_18 | hypothetical protein | - |
| N0552_RS22455 (22046) | 22046..22345 | + | 300 | WP_226156930.1 | hypothetical protein | - |
| N0552_RS22465 (23174) | 23174..26140 | - | 2967 | WP_001138014.1 | Tn3 family transposase TnpA_TnAs1 | Transposase |
| N0552_RS22470 (26144) | 26144..26704 | - | 561 | WP_001161490.1 | Tn3 family transposase TnpR_TnAs1 | Transposase |
| N0552_RS22475 (26880) | 26880..27230 | - | 351 | WP_000454193.1 | DUF3330 domain-containing protein | - |
| N0552_RS22480 (27433) | 27433..28446 | - | 1014 | WP_104774822.1 | IS91 family transposase ISAzo26 | Transposase |
| N0552_RS22485 (28591) | 28591..29088 | + | 498 | WP_001083725.1 | Dihydrofolate reductase | ARG |
| N0552_RS22490 (29200) | 29200..29490 | + | 291 | WP_001336345.1 | DUF1010 domain-containing protein | - |
| N0552_RS22495 (29496) | 29496..30334 | + | 839 | Protein_27 | Streptomycin 3''-adenylyltransferase | ARG |
| N0552_RS22500 (30451) | 30451..30798 | + | 348 | WP_000679427.1 | Multidrug transporter EmrE | ARG |
| N0552_RS22505 (30792) | 30792..31124 | + | 333 | Protein_29 | IS6 family transposase IS15 | Transposase |
| N0552_RS22510 (31181) | 31181..31885 | + | 705 | WP_001067858.1 | IS6 family transposase IS15DI | Transposase |
| N0552_RS22515 (32014) | 32014..32778 | + | 765 | WP_001389365.1 | IS6-like element IS6100 family transposase | - |
| N0552_RS22520 (33271) | 33271..33854 | - | 584 | Protein_32 | macrolide-binding transcriptional repressor MphR(A) | - |
| N0552_RS22525 (33854) | 33854..35092 | - | 1239 | WP_000004159.1 | macrolide resistance MFS transporter Mrx(A) | - |
| N0552_RS22530 (35089) | 35089..35994 | - | 906 | WP_000219391.1 | hypothetical protein | ARG |
| N0552_RS22535 (36116) | 36116..36820 | - | 705 | WP_001067855.1 | IS6-like element IS26 family transposase | - |
| N0552_RS22540 (37131) | 37131..37688 | + | 558 | WP_001235713.1 | Tn3 family transposase TnpR_Tn3 | Transposase |
| N0552_RS22545 (37871) | 37871..38731 | + | 861 | WP_000027057.1 | Beta-lactamase TEM | ARG |
| N0552_RS22550 (38901) | 38901..39656 | + | 756 | WP_012372818.1 | 16S rRNA (guanine(1405)-N(7))-methyltransferase | ARG |
| N0552_RS22555 (39782) | 39782..40486 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| N0552_RS22560 (40536) | 40536..41131 | + | 596 | Protein_40 | class A beta-lactamase | - |
| N0552_RS22565 (41183) | 41183..41887 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| N0552_RS22570 (41952) | 41952..42161 | + | 210 | Protein_42 | IS1 family transposase | - |
| N0552_RS22575 (43459) | 43459..43638 | + | 180 | WP_000347021.1 | hypothetical protein | - |
| N0552_RS22580 (43754) | 43754..44398 | - | 645 | WP_000203199.1 | recombinase family protein | - |
| N0552_RS22585 (44693) | 44693..45313 | + | 621 | WP_000864788.1 | ParA family protein | - |
| N0552_RS22590 (45365) | 45365..45595 | + | 231 | WP_000051066.1 | plasmid partition protein ParG | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|