MGE detailed information
MGE type: Prophage MGE length: 46481 bp
Accession: NZ_CP109601 Location: 2262724..2309204 Organism: Escherichia coli strain TL-14 Replicon: chromosome
Accession: NZ_CP109601 Location: 2262724..2309204 Organism: Escherichia coli strain TL-14 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| OGV15_RS10895 (2258623) | 2258623..2259843 | + | 1221 | WP_000225262.1 | DNA-binding transcriptional repressor Mlc | - |
| OGV15_RS10900 (2259968) | 2259968..2260663 | + | 696 | WP_000919231.1 | dethiobiotin synthase | - |
| OGV15_RS10905 (2260616) | 2260616..2261908 | - | 1293 | WP_001315626.1 | voltage-gated ClC-type chloride channel ClcB | - |
| OGV15_RS10910 (2262067) | 2262067..2262681 | - | 615 | WP_000148710.1 | Tat proofreading chaperone DmsD | - |
| OGV15_RS10915 (2262724) | 2262724..2263578 | - | 855 | WP_049254808.1 | dimethyl sulfoxide reductase anchor subunit family protein | - |
| OGV15_RS10920 (2263580) | 2263580..2264197 | - | 618 | WP_000213028.1 | dimethylsulfoxide reductase subunit B | - |
| OGV15_RS10925 (2264208) | 2264208..2266631 | - | 2424 | WP_001340362.1 | DmsA/YnfE/YnfF family dimethyl sulfoxide reductase | - |
| OGV15_RS10930 (2266692) | 2266692..2269118 | - | 2427 | WP_000041675.1 | DmsA/YnfE/YnfF family dimethyl sulfoxide reductase | - |
| OGV15_RS10935 (2269317) | 2269317..2269622 | - | 306 | WP_001300836.1 | DUF1161 domain-containing protein | - |
| OGV15_RS10940 (2269730) | 2269730..2270440 | + | 711 | WP_001321287.1 | YnfC family lipoprotein | - |
| OGV15_RS10945 (2270443) | 2270443..2271003 | - | 561 | WP_001138581.1 | spermidine N1-acetyltransferase | - |
| OGV15_RS10950 (2271038) | 2271038..2271379 | - | 342 | WP_000705211.1 | DUF1283 family protein | - |
| OGV15_RS10955 (2271514) | 2271514..2271840 | + | 327 | WP_000598292.1 | YnfA family protein | - |
| OGV15_RS10960 (2272046) | 2272046..2273260 | + | 1215 | WP_001295394.1 | starvation-sensing protein RspA | - |
| OGV15_RS10965 (2273272) | 2273272..2274291 | + | 1020 | WP_000836066.1 | Zn-dependent oxidoreductase | - |
| OGV15_RS10970 (2274439) | 2274439..2275648 | - | 1210 | Protein_2142 | IS4 family transposase IS10R | Transposase |
| OGV15_RS10975 (2275818) | 2275818..2277098 | - | 1281 | WP_000876958.1 | Putative defective protein IntQ ; Integrase | Integrase |
| OGV15_RS10980 (2277133) | 2277133..2277384 | - | 252 | WP_000005552.1 | excisionase family protein | - |
| OGV15_RS10985 (2277457) | 2277457..2279166 | - | 1710 | Protein_2145 | 3'-5' exoribonuclease | - |
| OGV15_RS10990 (2279154) | 2279154..2279411 | + | 258 | Protein_2146 | hypothetical protein | - |
| OGV15_RS10995 (2279452) | 2279452..2279874 | + | 423 | WP_001151262.1 | DUF977 family protein | - |
| OGV15_RS11000 (2279871) | 2279871..2280360 | + | 490 | Protein_2148 | class I SAM-dependent methyltransferase | - |
| OGV15_RS11005 (2280743) | 2280743..2282282 | - | 1540 | Protein_2149 | IS66 family transposase ISEc22 | Transposase |
| OGV15_RS11010 (2282331) | 2282331..2282561 | - | 231 | Protein_2150 | IS66 family insertion sequence element accessory protein TnpB | - |
| OGV15_RS11015 (2282567) | 2282567..2282689 | - | 123 | Protein_2151 | IS66 family transposase ISEc22 | Transposase |
| OGV15_RS11020 (2282932) | 2282932..2283353 | + | 422 | Protein_2152 | hypothetical protein | - |
| OGV15_RS11025 (2284009) | 2284009..2285031 | + | 1023 | Protein_2153 | ISNCY family transposase ISCARN112 | Transposase |
| OGV15_RS11030 (2285152) | 2285152..2285301 | + | 150 | WP_011443592.1 | ISNCY family transposase ISCARN112 | Transposase |
| OGV15_RS11035 (2285738) | 2285738..2286070 | - | 333 | WP_001301033.1 | FlxA-like family protein | - |
| OGV15_RS11040 (2286273) | 2286273..2286578 | - | 306 | WP_001326990.1 | protein YdfV | - |
| OGV15_RS11045 (2286603) | 2286603..2286842 | + | 240 | WP_000534858.1 | type II toxin-antitoxin system antitoxin RelB | Antitoxin Detail |
| OGV15_RS11050 (2286842) | 2286842..2287129 | + | 288 | WP_000323025.1 | type II toxin-antitoxin system mRNA interferase RelE | Toxin Detail |
| OGV15_RS11055 (2287201) | 2287201..2287356 | + | 156 | WP_000813254.1 | type I toxin-antitoxin system toxin HokD | - |
| OGV15_RS11060 (2287573) | 2287573..2287824 | + | 252 | WP_000980994.1 | protein Rem | - |
| OGV15_RS11065 (2287891) | 2287891..2288169 | + | 279 | WP_012304870.1 | hypothetical protein | - |
| OGV15_RS11070 (2288171) | 2288171..2289220 | + | 1050 | WP_001265199.1 | DUF968 domain-containing protein | - |
| OGV15_RS11075 (2289234) | 2289234..2289986 | + | 753 | WP_001047135.1 | antitermination protein | - |
| OGV15_RS11080 (2290264) | 2290264..2290353 | - | 90 | WP_120795389.1 | hypothetical protein | - |
| OGV15_RS11085 (2290408) | 2290408..2290620 | - | 213 | WP_000087756.1 | cold shock-like protein CspF | - |
| OGV15_RS11090 (2290921) | 2290921..2291136 | + | 216 | WP_000066484.1 | cold shock-like protein CspB | - |
| OGV15_RS11095 (2291500) | 2291500..2291670 | - | 171 | WP_211180497.1 | putative zinc-binding protein YnfU | - |
| OGV15_RS11100 (2291890) | 2291890..2292105 | + | 216 | WP_000839590.1 | phage lysis protein EssD | - |
| OGV15_RS11105 (2292110) | 2292110..2292421 | + | 312 | WP_000189916.1 | YdfR family protein | - |
| OGV15_RS11110 (2292418) | 2292418..2292951 | + | 534 | WP_001092971.1 | lysozyme | - |
| OGV15_RS11115 (2292948) | 2292948..2293445 | + | 498 | WP_001071769.1 | DUF2514 domain-containing protein | - |
| OGV15_RS11120 (2293808) | 2293808..2294020 | + | 213 | WP_000066495.1 | cold shock protein CspI | - |
| OGV15_RS11125 (2294031) | 2294031..2294219 | + | 189 | WP_071524604.1 | cold-shock protein | - |
| OGV15_RS11130 (2294222) | 2294222..2294287 | + | 66 | WP_120795388.1 | small protein YnfR | - |
| OGV15_RS11135 (2294367) | 2294367..2294522 | + | 156 | WP_001309517.1 | protein YnfN | - |
| OGV15_RS11140 (2294694) | 2294694..2294867 | + | 174 | WP_001019606.1 | addiction module toxin, GnsA/GnsB family | - |
| OGV15_RS11145 (2295019) | 2295019..2295429 | - | 411 | WP_000373090.1 | DUF1398 domain-containing protein | - |
| OGV15_RS11150 (2295487) | 2295487..2295720 | - | 234 | WP_063100973.1 | YlcI/YnfO family protein | - |
| OGV15_RS11155 (2296109) | 2296109..2296654 | + | 546 | WP_000453611.1 | DNA-packaging protein | - |
| OGV15_RS11160 (2296629) | 2296629..2298424 | + | 1796 | Protein_2180 | phage terminase large subunit family protein | - |
| OGV15_RS11165 (2298424) | 2298424..2298999 | + | 576 | WP_000885611.1 | tail fiber assembly protein | - |
| OGV15_RS11170 (2299097) | 2299097..2299687 | - | 591 | WP_000078177.1 | Tn3 family transposase TnpR_ISSba14 | Transposase |
| OGV15_RS11175 (2300004) | 2300004..2300237 | - | 234 | WP_000836768.1 | cold shock protein YdfK | - |
| OGV15_RS11180 (2300306) | 2300306..2300419 | - | 114 | WP_120795384.1 | YnaM/YnfT family protein | - |
| OGV15_RS11185 (2300940) | 2300940..2302307 | + | 1368 | Protein_2185 | MHS family MFS transporter | - |
| OGV15_RS11190 (2302396) | 2302396..2303856 | + | 1461 | WP_000527809.1 | mannitol dehydrogenase family protein | - |
| OGV15_RS11195 (2303891) | 2303891..2304094 | - | 204 | WP_000214712.1 | putative selenium delivery protein YdfZ | - |
| OGV15_RS11200 (2304271) | 2304271..2304957 | - | 687 | WP_000215549.1 | DNA-binding transcriptional regulator rspR | - |
| OGV15_RS11205 (2305046) | 2305046..2305792 | - | 747 | WP_000636571.1 | NADP-dependent 3-hydroxy acid dehydrogenase YdfG | VF |
| OGV15_RS11210 (2305929) | 2305929..2307974 | + | 2046 | WP_000210373.1 | peptidyl-dipeptidase Dcp | - |
| OGV15_RS11215 (2308018) | 2308018..2308536 | - | 519 | WP_001024746.1 | 2-oxo-tetronate isomerase | - |
| OGV15_RS11220 (2308812) | 2308812..2309204 | + | 393 | WP_000671737.1 | YdeI family stress tolerance OB fold protein | - |
| OGV15_RS11225 (2309459) | 2309459..2310349 | + | 891 | WP_000592814.1 | diguanylate cyclase DgcZ | - |
| OGV15_RS11230 (2310464) | 2310464..2310568 | - | 105 | WP_211180496.1 | protein MgtT | - |
| OGV15_RS11235 (2310568) | 2310568..2310663 | - | 96 | WP_000901367.1 | protein MgtS | - |
| OGV15_RS11240 (2310790) | 2310790..2311977 | - | 1188 | WP_001054183.1 | efflux MFS transporter YdeE | - |
| OGV15_RS11245 (2312172) | 2312172..2313070 | + | 899 | Protein_2197 | O-acetylserine/cysteine exporter | - |
| OGV15_RS11250 (2313101) | 2313101..2313319 | - | 219 | WP_000803657.1 | multiple antibiotic resistance protein MarB | - |
| OGV15_RS11255 (2313351) | 2313351..2313734 | - | 384 | WP_000091199.1 | MDR efflux pump AcrAB transcriptional activator MarA | - |
| OGV15_RS11260 (2313754) | 2313754..2314188 | - | 435 | WP_000843414.1 | multiple antibiotic resistance transcriptional regulator MarR | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|