MGE detailed information
MGE type: Mobilizable plasmid MGE length: 75258 bp
Accession: NZ_CP107723 Location: 1..75258 Organism: Escherichia coli strain 2021CK-01361 Replicon: plasmid unnamed3
Accession: NZ_CP107723 Location: 1..75258 Organism: Escherichia coli strain 2021CK-01361 Replicon: plasmid unnamed3
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| N4T39_RS26075 (N4T39_26075) | 387..1472 | - | 1086 | WP_001148851.1 | iron-containing alcohol dehydrogenase family protein | - |
| N4T39_RS26080 (N4T39_26080) | 1506..2663 | - | 1158 | WP_000217345.1 | alpha-hydroxy acid oxidase | - |
| N4T39_RS26085 (N4T39_26085) | 2660..3826 | - | 1167 | WP_000135555.1 | histidinol-phosphate transaminase | - |
| N4T39_RS26090 (N4T39_26090) | 3885..5567 | - | 1683 | WP_000993475.1 | urocanate hydratase | - |
| N4T39_RS26095 (N4T39_26095) | 5611..7161 | - | 1551 | WP_000741484.1 | histidine ammonia-lyase | - |
| N4T39_RS26100 (N4T39_26100) | 7276..8061 | - | 786 | WP_016240370.1 | Aliphatic sulfonates import ATP-binding protein SsuB | VF |
| N4T39_RS26105 (N4T39_26105) | 8061..8942 | - | 882 | WP_001087990.1 | ABC transporter permease | - |
| N4T39_RS26110 (N4T39_26110) | 8954..9940 | - | 987 | WP_000069054.1 | ABC transporter substrate-binding protein | - |
| N4T39_RS26115 (N4T39_26115) | 10179..10775 | - | 597 | WP_000148344.1 | HutD family protein | - |
| N4T39_RS26120 (N4T39_26120) | 10772..12145 | - | 1374 | WP_001112072.1 | formimidoylglutamate deiminase | - |
| N4T39_RS26125 (N4T39_26125) | 12387..13187 | + | 801 | WP_001294851.1 | histidine utilization repressor | - |
| N4T39_RS26130 (N4T39_26130) | 13341..14603 | + | 1263 | WP_001515701.1 | imidazolonepropionase | - |
| N4T39_RS26135 (N4T39_26135) | 14600..15424 | + | 825 | WP_000058769.1 | N-formylglutamate deformylase | - |
| N4T39_RS26140 (N4T39_26140) | 15656..16333 | + | 678 | WP_001181218.1 | carboxymuconolactone decarboxylase family protein | - |
| N4T39_RS26145 (N4T39_26145) | 16379..17347 | - | 969 | WP_022652343.1 | IS5 family transposase IS903B | Transposase |
| N4T39_RS26150 (N4T39_26150) | 17876..18262 | + | 387 | WP_001039464.1 | plasmid stabilization protein StbA | - |
| N4T39_RS26155 (N4T39_26155) | 18402..19370 | - | 969 | WP_000654805.1 | IS5 family transposase IS903B | Transposase |
| N4T39_RS26160 (N4T39_26160) | 20255..20563 | - | 309 | Protein_18 | replication initiation protein | - |
| N4T39_RS26170 (N4T39_26170) | 21422..22909 | - | 1488 | WP_162685408.1 | group II intron reverse transcriptase/maturase | - |
| N4T39_RS26175 (N4T39_26175) | 23315..23746 | + | 432 | WP_000776034.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| N4T39_RS26180 (N4T39_26180) | 23746..25017 | + | 1272 | WP_004118291.1 | Y-family DNA polymerase | - |
| N4T39_RS26185 (N4T39_26185) | 25099..26073 | - | 975 | WP_000064120.1 | ParB family protein | - |
| N4T39_RS26190 (N4T39_26190) | 26073..27278 | - | 1206 | WP_000368714.1 | AAA family ATPase | - |
| N4T39_RS26195 (N4T39_26195) | 27693..27962 | + | 270 | WP_000339857.1 | hypothetical protein | - |
| N4T39_RS26200 (N4T39_26200) | 28319..29185 | - | 867 | WP_004118283.1 | replication initiation protein | - |
| N4T39_RS26205 (N4T39_26205) | 29720..29824 | + | 105 | WP_032409716.1 | hypothetical protein | - |
| N4T39_RS26210 (N4T39_26210) | 29953..30210 | + | 258 | WP_000764642.1 | hypothetical protein | - |
| N4T39_RS26215 (N4T39_26215) | 30268..31044 | - | 777 | WP_049245386.1 | site-specific integrase | - |
| N4T39_RS26220 (N4T39_26220) | 31047..31730 | - | 684 | WP_023280892.1 | hypothetical protein | - |
| N4T39_RS26225 (N4T39_26225) | 31888..32193 | - | 306 | WP_016946795.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| N4T39_RS26230 (N4T39_26230) | 32195..32413 | - | 219 | WP_004197642.1 | type II toxin-antitoxin system antitoxin CcdA | Antitoxin Detail |
| N4T39_RS26235 (N4T39_26235) | 33007..33255 | + | 249 | WP_000272716.1 | hypothetical protein | - |
| N4T39_RS26240 (N4T39_26240) | 33252..33824 | + | 573 | WP_020805590.1 | hypothetical protein | - |
| N4T39_RS26245 (N4T39_26245) | 33855..34349 | + | 495 | WP_020805591.1 | hypothetical protein | - |
| N4T39_RS26250 (N4T39_26250) | 34393..34761 | + | 369 | WP_004197807.1 | hypothetical protein | - |
| N4T39_RS26255 (N4T39_26255) | 34795..34998 | + | 204 | WP_004197808.1 | HHA domain-containing protein | - |
| N4T39_RS26260 (N4T39_26260) | 35012..35215 | + | 204 | WP_004197809.1 | hypothetical protein | - |
| N4T39_RS26265 (N4T39_26265) | 35397..36401 | - | 1005 | WP_000427623.1 | IS110 family transposase IS4321R | Transposase |
| N4T39_RS26270 (N4T39_26270) | 36480..37037 | - | 558 | WP_017901435.1 | Tn3 family transposase TnpR_ISPa38 | Transposase |
| N4T39_RS26275 (N4T39_26275) | 37060..37419 | - | 360 | WP_017901436.1 | cupin domain-containing protein | - |
| N4T39_RS26280 (N4T39_26280) | 37570..37959 | - | 390 | WP_017901438.1 | DUF86 domain-containing protein | - |
| N4T39_RS26285 (N4T39_26285) | 37956..38246 | - | 291 | WP_025999361.1 | nucleotidyltransferase family protein | - |
| N4T39_RS26290 (N4T39_26290) | 38403..41369 | + | 2967 | WP_032673378.1 | Tn3 family transposase TnpA_TnShfr1 | Transposase |
| N4T39_RS26295 (N4T39_26295) | 41448..42452 | + | 1005 | WP_000427623.1 | IS110 family transposase IS4321R | Transposase |
| N4T39_RS26300 (N4T39_26300) | 42931..43536 | - | 606 | WP_000509966.1 | Tn3 family transposase TnpR_Tn5403 | Transposase |
| N4T39_RS26305 (N4T39_26305) | 43631..46528 | + | 2898 | WP_049106386.1 | Tn3 family transposase TnpA_Tn5403 | Transposase |
| N4T39_RS26310 (N4T39_26310) | 46544..46744 | + | 201 | Protein_48 | MerR family transcriptional regulator | - |
| N4T39_RS26315 (N4T39_26315) | 47605..49080 | + | 1476 | WP_020324153.1 | SEC-C metal-binding domain-containing protein | - |
| N4T39_RS26320 (N4T39_26320) | 50284..50853 | - | 570 | WP_016359304.1 | Tn3 family transposase TnpR_ISPa38 | Transposase |
| N4T39_RS26325 (N4T39_26325) | 51093..52307 | + | 1215 | WP_005012528.1 | type II site-specific deoxyribonuclease | - |
| N4T39_RS26330 (N4T39_26330) | 52341..53774 | - | 1434 | WP_001288432.1 | DNA cytosine methyltransferase | - |
| N4T39_RS26335 (N4T39_26335) | 53873..54145 | + | 273 | Protein_53 | IS1 family transposase IS1X2 | Transposase |
| N4T39_RS26340 (N4T39_26340) | 54355..55437 | - | 1083 | WP_032140505.1 | lytic murein transglycosylase B | - |
| N4T39_RS26350 (N4T39_26350) | 56201..56719 | - | 519 | Protein_56 | PLP-dependent aspartate aminotransferase family protein | - |
| N4T39_RS26355 (N4T39_26355) | 56801..58078 | - | 1278 | WP_001515737.1 | L-serine ammonia-lyase, iron-sulfur-dependent, subunit alpha | - |
| N4T39_RS26360 (N4T39_26360) | 58426..59067 | - | 642 | WP_000948259.1 | ABC-type transport auxiliary lipoprotein family protein | - |
| N4T39_RS26365 (N4T39_26365) | 59067..60005 | - | 939 | WP_000449980.1 | MlaD family protein | - |
| N4T39_RS26370 (N4T39_26370) | 60007..60798 | - | 792 | WP_001325019.1 | putative ribonucleotide transport ATP-binding protein mkl | VF |
| N4T39_RS26375 (N4T39_26375) | 60804..61949 | - | 1146 | WP_001325018.1 | ABC transporter permease | - |
| N4T39_RS26380 (N4T39_26380) | 62289..62993 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| N4T39_RS26385 (N4T39_26385) | 63196..63309 | - | 114 | Protein_63 | IS3 family transposase ISSen4 | Transposase |
| N4T39_RS26390 (N4T39_26390) | 63579..64532 | + | 954 | WP_001198018.1 | cation diffusion facilitator family transporter | - |
| N4T39_RS26395 (N4T39_26395) | 64644..65018 | + | 375 | WP_011977761.1 | cytochrome b562 | - |
| N4T39_RS26400 (N4T39_26400) | 65456..66037 | + | 582 | WP_011977760.1 | cytochrome b/b6 domain-containing protein | - |
| N4T39_RS26405 (N4T39_26405) | 66173..66862 | + | 690 | WP_016240364.1 | VIT family protein | - |
| N4T39_RS26410 (N4T39_26410) | 67005..67418 | - | 414 | WP_071603210.1 | hypothetical protein | - |
| N4T39_RS26415 (N4T39_26415) | 67489..68696 | + | 1208 | WP_087776852.1 | IS3 family transposase ISEcl1 | Transposase |
| N4T39_RS26420 (N4T39_26420) | 69233..70228 | + | 996 | WP_042922297.1 | IS110 family transposase IS1663 | Transposase |
| N4T39_RS26425 (N4T39_26425) | 70527..71765 | + | 1239 | WP_000219087.1 | IS110 family transposase ISCps4 | Transposase |
| N4T39_RS26430 (N4T39_26430) | 71915..72343 | + | 429 | WP_001554382.1 | GFA family protein | - |
| N4T39_RS26435 (N4T39_26435) | 73137..73352 | + | 216 | Protein_73 | IS3 family transposase ISKpn34 | Transposase |
| N4T39_RS26440 (N4T39_26440) | 73340..73504 | - | 165 | Protein_74 | IS3 family transposase ISKpn34 | Transposase |
| N4T39_RS26445 (N4T39_26445) | 73582..74061 | + | 480 | Protein_75 | IS3 family transposase ISYen3 | Transposase |
| N4T39_RS26450 (N4T39_26450) | 74210..75190 | - | 981 | WP_000019450.1 | IS5 family transposase ISKpn26 | Transposase |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|