MGE detailed information
MGE type: Genomic_island MGE length: 23842 bp
Accession: NZ_CP106996 Location: 4017768..4041609 Organism: Escherichia coli strain SY22D8 Replicon: chromosome
Accession: NZ_CP106996 Location: 4017768..4041609 Organism: Escherichia coli strain SY22D8 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| OFB06_RS19720 (4013339) | 4013339..4013785 | - | 447 | WP_001092461.1 | ribosomal protein S18-alanine N-acetyltransferase | - |
| OFB06_RS19725 (4013754) | 4013754..4014167 | - | 414 | WP_000204012.1 | DNA polymerase III subunit psi | - |
| OFB06_RS19730 (4014270) | 4014270..4015301 | + | 1032 | WP_001272330.1 | 16S rRNA (guanine(1207)-N(2))-methyltransferase RsmC | - |
| OFB06_RS19750 (4015930) | 4015930..4016166 | - | 237 | WP_001393508.1 | DUF1435 domain-containing protein | - |
| OFB06_RS19755 (4016307) | 4016307..4017095 | + | 789 | WP_000331618.1 | siderophore-iron reductase FhuF | - |
| OFB06_RS19760 (4017133) | 4017133..4017810 | - | 678 | WP_001301727.1 | DNA-binding transcriptional activator BglJ | - |
| OFB06_RS19765 (4017768) | 4017768..4018493 | - | 726 | WP_000936635.1 | Putative transcription factor YjjQ | VF |
| OFB06_RS19770 (4019112) | 4019112..4019882 | + | 771 | WP_001338213.1 | threonine/serine exporter ThrE family protein | - |
| OFB06_RS19775 (4019873) | 4019873..4020346 | + | 474 | WP_000538191.1 | threonine/serine exporter | - |
| OFB06_RS19780 (4020453) | 4020453..4020992 | + | 540 | WP_000098818.1 | primosomal protein DnaT | - |
| OFB06_RS19785 (4020995) | 4020995..4021732 | + | 738 | WP_000799911.1 | IS21 family transposase ISSme2 | Transposase |
| OFB06_RS19790 (4021781) | 4021781..4022275 | + | 495 | WP_001308243.1 | DUF2501 domain-containing protein YjjA | - |
| OFB06_RS19795 (4022529) | 4022529..4024538 | + | 2010 | Protein_3868 | phosphatidylglycerol--membrane-oligosaccharide glycerophosphotransferase | - |
| OFB06_RS19800 (4024645) | 4024645..4025853 | + | 1209 | WP_006250222.1 | IS4 family transposase IS10R | Transposase |
| OFB06_RS19805 (4027123) | 4027123..4027839 | + | 717 | WP_001295734.1 | N-acetylneuraminic acid outer membrane channel NanC | - |
| OFB06_RS19810 (4027859) | 4027859..4028965 | + | 1107 | WP_001309184.1 | N-acetylneuraminate epimerase | - |
| OFB06_RS19815 (4029030) | 4029030..4030010 | + | 981 | WP_000991438.1 | 9-O-acetyl-N-acetylneuraminic acid deacetylase | - |
| OFB06_RS19820 (4030120) | 4030120..4030325 | + | 206 | Protein_3873 | HNH endonuclease | - |
| OFB06_RS19825 (4030593) | 4030593..4031833 | - | 1241 | Protein_3874 | helicase YjhR | - |
| OFB06_RS19830 (4031949) | 4031949..4032080 | + | 132 | WP_001309182.1 | hypothetical protein | - |
| OFB06_RS19835 (4032571) | 4032571..4032828 | + | 258 | WP_001054376.1 | YjhX family toxin | Toxin Detail |
| OFB06_RS19840 (4032840) | 4032840..4033385 | + | 546 | WP_001309181.1 | N-acetyltransferase | Antitoxin Detail |
| OFB06_RS19845 (4033441) | 4033441..4034187 | + | 747 | WP_000354251.1 | class I SAM-dependent methyltransferase | - |
| OFB06_RS19850 (4034356) | 4034356..4034574 | + | 219 | Protein_3879 | hypothetical protein | - |
| OFB06_RS19855 (4034612) | 4034612..4034728 | + | 117 | Protein_3880 | VOC family protein | - |
| OFB06_RS19860 (4034973) | 4034973..4036094 | + | 1122 | WP_000010829.1 | M42 family metallopeptidase | - |
| OFB06_RS19865 (4036091) | 4036091..4036369 | + | 279 | WP_000722973.1 | PTS sugar transporter subunit IIB SgcB | - |
| OFB06_RS19870 (4036381) | 4036381..4037694 | + | 1314 | WP_000460843.1 | PTS sugar transporter subunit IIC SgcC | - |
| OFB06_RS19875 (4037707) | 4037707..4038513 | + | 807 | WP_000118626.1 | BtpA family protein SgcQ | - |
| OFB06_RS19880 (4038644) | 4038644..4039075 | + | 432 | WP_000606406.1 | SgcA family PTS sugar transporter subunit IIA | - |
| OFB06_RS19885 (4039087) | 4039087..4039719 | + | 633 | WP_000600622.1 | ribulose-phosphate 3 epimerase family protein | - |
| OFB06_RS19890 (4039736) | 4039736..4040518 | + | 783 | WP_000082780.1 | DeoR/GlpR family DNA-binding transcription regulator | - |
| OFB06_RS19895 (4040821) | 4040821..4041609 | + | 789 | WP_000251798.1 | IclR family transcriptional regulator | - |
| OFB06_RS19900 (4041614) | 4041614..4042519 | + | 906 | WP_000714563.1 | dihydrodipicolinate synthase family protein | - |
| OFB06_RS19905 (4042530) | 4042530..4044497 | + | 1968 | WP_000116326.1 | xylonate dehydratase YjhG | - |
| OFB06_RS19910 (4044604) | 4044604..4045953 | + | 1350 | WP_001128363.1 | GntP family permease | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|