MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 52177 bp
Accession: NZ_CP106964 Location: 4850336..4902512 Organism: Klebsiella variicola strain SY1 Replicon: chromosome
Accession: NZ_CP106964 Location: 4850336..4902512 Organism: Klebsiella variicola strain SY1 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| OCU08_RS23465 | 4846775..4848157 | - | 1383 | WP_072121967.1 | carbohydrate porin | - |
| OCU08_RS23470 | 4848428..4849747 | - | 1320 | WP_072121968.1 | xylose isomerase | - |
| OCU08_RS23475 | 4850174..4851613 | + | 1440 | WP_163590999.1 | MFS transporter | - |
| OCU08_RS23480 | 4851672..4853351 | + | 1680 | WP_072121970.1 | glycoside hydrolase family 43 protein | - |
| OCU08_RS23485 | 4853485..4853970 | - | 486 | WP_032433429.1 | Major exported protein | VF |
| OCU08_RS23490 | 4853972..4854490 | - | 519 | WP_070612609.1 | hypothetical protein | - |
| OCU08_RS23495 | 4854471..4854986 | - | 516 | WP_072121971.1 | DUF2778 domain-containing protein | - |
| OCU08_RS23500 | 4855702..4856130 | - | 429 | WP_224275695.1 | DUF2778 domain-containing protein | - |
| OCU08_RS23505 | 4856531..4857205 | + | 675 | WP_070612603.1 | hypothetical protein | - |
| OCU08_RS23510 | 4857207..4857554 | + | 348 | WP_063267089.1 | hypothetical protein | - |
| OCU08_RS23515 | 4857557..4858036 | + | 480 | WP_101880629.1 | type VI secretion system tube protein TssD | - |
| OCU08_RS23520 | 4858228..4858551 | - | 324 | Protein_4611 | hypothetical protein | - |
| OCU08_RS23525 | 4858570..4859681 | - | 1112 | Protein_4612 | IS3 family transposase | - |
| OCU08_RS23530 | 4859760..4859933 | + | 174 | Protein_4613 | cytochrome C oxidase Cbb3 | - |
| OCU08_RS23535 | 4860212..4862389 | - | 2178 | WP_072121974.1 | Z1 domain-containing protein | - |
| OCU08_RS23540 | 4862396..4863910 | - | 1515 | WP_162542663.1 | ATP-binding protein | - |
| OCU08_RS23545 | 4863932..4865293 | - | 1362 | WP_072121975.1 | DNA (cytosine-5-)-methyltransferase | - |
| OCU08_RS23550 | 4865962..4866834 | + | 873 | WP_072121976.1 | HNH endonuclease | - |
| OCU08_RS23555 | 4867203..4867496 | + | 294 | WP_070612596.1 | hypothetical protein | - |
| OCU08_RS23560 | 4867582..4867698 | + | 117 | WP_233424044.1 | ArdC-like ssDNA-binding domain-containing protein | - |
| OCU08_RS23565 | 4867656..4868492 | + | 837 | WP_233424048.1 | zincin-like metallopeptidase domain-containing protein | - |
| OCU08_RS23570 | 4868797..4869719 | + | 923 | Protein_4621 | TraI domain-containing protein | - |
| OCU08_RS23575 | 4869708..4869954 | + | 247 | Protein_4622 | hypothetical protein ; Integrase | Integrase |
| OCU08_RS23580 | 4870405..4871136 | + | 732 | WP_117146616.1 | DUF2971 domain-containing protein | - |
| OCU08_RS23585 | 4871431..4873227 | - | 1797 | WP_117146617.1 | HNH endonuclease signature motif containing protein | - |
| OCU08_RS23590 | 4873548..4874345 | - | 798 | WP_117146618.1 | helix-turn-helix transcriptional regulator | - |
| OCU08_RS23595 | 4874951..4875940 | + | 990 | WP_117146619.1 | hypothetical protein | VF |
| OCU08_RS23600 | 4875944..4876399 | + | 456 | WP_252041025.1 | hypothetical protein | - |
| OCU08_RS23605 | 4876479..4876853 | - | 375 | WP_117146621.1 | TA system toxin CbtA family protein | Toxin Detail |
| OCU08_RS23610 | 4876903..4877262 | - | 360 | WP_117146622.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| OCU08_RS23615 | 4877285..4877506 | - | 222 | WP_111965524.1 | DUF987 domain-containing protein | - |
| OCU08_RS23620 | 4877520..4878002 | - | 483 | WP_117146623.1 | DNA repair protein RadC | - |
| OCU08_RS23625 | 4878243..4878722 | - | 480 | WP_117146624.1 | antirestriction protein | - |
| OCU08_RS23630 | 4878801..4879622 | - | 822 | WP_117146625.1 | DUF932 domain-containing protein | - |
| OCU08_RS23635 | 4879729..4879941 | - | 213 | WP_038418589.1 | hypothetical protein | - |
| OCU08_RS23640 | 4880022..4880381 | - | 360 | WP_117146626.1 | hypothetical protein | - |
| OCU08_RS23645 | 4880436..4880846 | - | 411 | WP_058706461.1 | hypothetical protein | - |
| OCU08_RS23650 | 4880954..4881337 | - | 384 | WP_252041027.1 | WYL domain-containing protein | - |
| OCU08_RS23655 | 4881444..4881632 | - | 189 | WP_252041029.1 | sporulation transcriptional regulator SpoIIID | - |
| OCU08_RS23660 | 4881692..4882420 | - | 729 | WP_117146627.1 | DUF3944 domain-containing protein | - |
| OCU08_RS23665 | 4882611..4883570 | - | 960 | WP_117146628.1 | hypothetical protein | - |
| OCU08_RS23670 | 4884696..4885265 | + | 570 | WP_044704249.1 | inovirus Gp2 family protein | - |
| OCU08_RS23675 | 4885421..4885639 | + | 219 | WP_181940086.1 | AlpA family transcriptional regulator | - |
| OCU08_RS23680 | 4885936..4886340 | + | 405 | WP_181940088.1 | putative zinc ribbon protein | - |
| OCU08_RS23685 | 4886622..4887707 | + | 1086 | WP_117146630.1 | DNA sulfur modification protein DndB | - |
| OCU08_RS23690 | 4887704..4889338 | + | 1635 | WP_117146631.1 | DNA phosphorothioation system sulfurtransferase DndC | - |
| OCU08_RS23695 | 4889328..4891337 | + | 2010 | WP_117146642.1 | DNA sulfur modification protein DndD | - |
| OCU08_RS23700 | 4891337..4891690 | + | 354 | WP_039298054.1 | DNA sulfur modification protein DndE | - |
| OCU08_RS23705 | 4891740..4892360 | + | 621 | WP_117146632.1 | hypothetical protein | - |
| OCU08_RS23710 | 4892395..4893216 | - | 822 | WP_039298057.1 | restriction endonuclease | - |
| OCU08_RS23715 | 4893213..4898294 | - | 5082 | WP_117146633.1 | DNA phosphorothioation-dependent restriction protein DptH | - |
| OCU08_RS23720 | 4898275..4899600 | - | 1326 | WP_117146643.1 | DNA phosphorothioation-dependent restriction protein DptG | - |
| OCU08_RS23725 | 4899605..4901254 | - | 1650 | WP_117146634.1 | DNA phosphorothioation-dependent restriction protein DptF | - |
| OCU08_RS23730 | 4901496..4902758 | - | 1263 | WP_117146635.1 | integrase arm-type DNA-binding domain-containing protein | - |
| OCU08_RS23740 | 4903623..4904297 | + | 675 | WP_072121996.1 | carbonic anhydrase | - |
| OCU08_RS23745 | 4904294..4905763 | + | 1470 | WP_072121997.1 | SulP family inorganic anion transporter | - |
| OCU08_RS23750 | 4905875..4906894 | + | 1020 | WP_072121998.1 | NAD(P)-dependent alcohol dehydrogenase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|