MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 103070 bp
Accession: NZ_CP104868 Location: 5288065..5391134 Organism: Pseudomonas aeruginosa strain PALA7 Replicon: chromosome
Accession: NZ_CP104868 Location: 5288065..5391134 Organism: Pseudomonas aeruginosa strain PALA7 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PALA7_RS24480 (PALA7_04850) | 5283691..5287836 | + | 4146 | WP_003103857.1 | two-partner secretion system exoprotein TpsA4 | - |
| PALA7_RS24485 (PALA7_04851) | 5288202..5289062 | + | 861 | WP_003158180.1 | ParA family protein | - |
| PALA7_RS24490 (PALA7_04852) | 5289064..5289789 | + | 726 | WP_003103853.1 | hypothetical protein | - |
| PALA7_RS24495 (PALA7_04853) | 5289786..5290283 | + | 498 | WP_003103852.1 | hypothetical protein | - |
| PALA7_RS24500 (PALA7_04854) | 5290289..5291035 | + | 747 | WP_003159720.1 | hypothetical protein | - |
| PALA7_RS24505 (PALA7_04855) | 5291032..5291718 | + | 687 | WP_003159719.1 | Lar family restriction alleviation protein | - |
| PALA7_RS24510 (PALA7_04856) | 5291718..5292419 | + | 702 | WP_003103849.1 | DUF2786 domain-containing protein | - |
| PALA7_RS24515 (PALA7_04857) | 5292416..5293123 | + | 708 | WP_003103848.1 | HNH endonuclease signature motif containing protein | - |
| PALA7_RS24520 (PALA7_04858) | 5293107..5293325 | + | 219 | WP_003103847.1 | hypothetical protein | - |
| PALA7_RS24525 (PALA7_04859) | 5293322..5294665 | + | 1344 | WP_003103846.1 | replicative DNA helicase | - |
| PALA7_RS24530 | 5295104..5295550 | - | 447 | WP_016561619.1 | hypothetical protein | - |
| PALA7_RS24535 (PALA7_04861) | 5295728..5295913 | + | 186 | WP_003103845.1 | hypothetical protein | - |
| PALA7_RS24540 (PALA7_04862) | 5295903..5296430 | + | 528 | WP_003103844.1 | hypothetical protein | - |
| PALA7_RS24545 (PALA7_04863) | 5296427..5296684 | + | 258 | WP_003103843.1 | hypothetical protein | - |
| PALA7_RS24550 | 5296677..5297174 | + | 498 | WP_003125258.1 | hypothetical protein | - |
| PALA7_RS24555 (PALA7_04865) | 5297167..5297400 | + | 234 | WP_003103841.1 | hypothetical protein | - |
| PALA7_RS24560 (PALA7_04866) | 5297400..5298416 | + | 1017 | WP_003158179.1 | nucleoid-associated protein YejK | - |
| PALA7_RS24565 (PALA7_04867) | 5298419..5298667 | + | 249 | WP_003111972.1 | Arc family DNA-binding protein | - |
| PALA7_RS24570 (PALA7_04868) | 5298664..5300397 | + | 1734 | WP_003158178.1 | ParB family protein | - |
| PALA7_RS24575 (PALA7_04869) | 5300425..5301180 | + | 756 | WP_003125263.1 | DUF2857 domain-containing protein | - |
| PALA7_RS24580 (PALA7_04870) | 5301183..5302508 | + | 1326 | WP_071534719.1 | STY4528 family pathogenicity island replication protein | - |
| PALA7_RS24585 (PALA7_04872) | 5303277..5303447 | + | 171 | WP_003159716.1 | hypothetical protein | - |
| PALA7_RS24590 (PALA7_04873) | 5303603..5304331 | + | 729 | WP_003105754.1 | TIGR03761 family integrating conjugative element protein | - |
| PALA7_RS24595 (PALA7_04874) | 5304337..5304885 | + | 549 | WP_003105753.1 | DUF3158 family protein | - |
| PALA7_RS24600 (PALA7_04875) | 5304932..5305771 | + | 840 | WP_003105750.1 | Rha family transcriptional regulator | - |
| PALA7_RS24605 (PALA7_04876) | 5305801..5306289 | + | 489 | WP_003105748.1 | single-stranded DNA-binding protein | - |
| PALA7_RS24610 | 5306445..5306642 | + | 198 | WP_003109353.1 | CrpP family ICE-associated protein | - |
| PALA7_RS24615 (PALA7_04877) | 5306708..5306926 | - | 219 | WP_003105747.1 | hypothetical protein | - |
| PALA7_RS24620 | 5307126..5307386 | - | 261 | WP_003105742.1 | hypothetical protein | - |
| PALA7_RS24625 (PALA7_04879) | 5307408..5307818 | - | 411 | WP_003105740.1 | tRNA(fMet)-specific endonuclease VapC | Toxin Detail |
| PALA7_RS24630 (PALA7_04880) | 5307818..5308048 | - | 231 | WP_003158175.1 | type II toxin-antitoxin system VapB family antitoxin | Antitoxin Detail |
| PALA7_RS24635 (PALA7_04881) | 5308304..5310223 | + | 1920 | WP_004352838.1 | type I DNA topoisomerase | - |
| PALA7_RS24640 | 5310531..5310740 | + | 210 | WP_003105733.1 | cold-shock protein | - |
| PALA7_RS24645 (PALA7_04882) | 5310961..5312850 | + | 1890 | WP_003105732.1 | hypothetical protein | - |
| PALA7_RS24650 (PALA7_04883) | 5312847..5314820 | + | 1974 | WP_003105731.1 | DEAD/DEAH box helicase | - |
| PALA7_RS24655 (PALA7_04884) | 5314942..5315724 | + | 783 | WP_015060166.1 | phage Gp37/Gp68 family protein | - |
| PALA7_RS24660 (PALA7_04885) | 5315757..5317010 | + | 1254 | WP_004352835.1 | three-Cys-motif partner protein TcmP | - |
| PALA7_RS24665 (PALA7_04886) | 5317184..5318308 | + | 1125 | WP_003099755.1 | hypothetical protein | VF |
| PALA7_RS24670 (PALA7_04887) | 5318308..5320017 | + | 1710 | WP_003099757.1 | hypothetical protein | VF |
| PALA7_RS24675 (PALA7_04888) | 5320021..5321346 | + | 1326 | WP_003099758.1 | type 4b pilus protein PilO2 | - |
| PALA7_RS24680 (PALA7_04889) | 5321336..5321869 | + | 534 | WP_003099760.1 | type IV pilus biogenesis protein PilP | - |
| PALA7_RS24685 (PALA7_04890) | 5321878..5323458 | + | 1581 | WP_003099761.1 | hypothetical protein | VF |
| PALA7_RS24690 (PALA7_04891) | 5323458..5324537 | + | 1080 | WP_003099764.1 | Toxin coregulated pilus biosynthesis protein E | VF |
| PALA7_RS24695 (PALA7_04892) | 5324559..5325089 | + | 531 | WP_003099765.1 | hypothetical protein | VF |
| PALA7_RS24700 (PALA7_04893) | 5325086..5326042 | + | 957 | WP_003117051.1 | Twitching mobility protein | VF |
| PALA7_RS24705 (PALA7_04894) | 5326035..5327414 | + | 1380 | WP_003117053.1 | hypothetical protein | VF |
| PALA7_RS24710 (PALA7_04895) | 5327432..5327869 | + | 438 | WP_003117054.1 | hypothetical protein | VF |
| PALA7_RS24715 (PALA7_04896) | 5328788..5329177 | + | 390 | WP_003158173.1 | hypothetical protein | - |
| PALA7_RS24720 (PALA7_04897) | 5329252..5329425 | + | 174 | WP_003158172.1 | hypothetical protein | - |
| PALA7_RS24725 (PALA7_04898) | 5329427..5329561 | + | 135 | WP_003099783.1 | hypothetical protein | - |
| PALA7_RS24730 (PALA7_04899) | 5329886..5330365 | + | 480 | WP_003117056.1 | STY4534 family ICE replication protein | - |
| PALA7_RS24735 (PALA7_04900) | 5330503..5330661 | + | 159 | WP_003109368.1 | hypothetical protein | - |
| PALA7_RS24740 (PALA7_04901) | 5330735..5330932 | + | 198 | WP_003117057.1 | hypothetical protein | - |
| PALA7_RS24745 (PALA7_04902) | 5331417..5332124 | + | 708 | WP_003117058.1 | hypothetical protein | - |
| PALA7_RS24750 (PALA7_04903) | 5332360..5332710 | + | 351 | WP_003099791.1 | hypothetical protein | - |
| PALA7_RS24755 (PALA7_04904) | 5332767..5333399 | + | 633 | WP_003158170.1 | DUF3275 family protein | - |
| PALA7_RS24760 (PALA7_04905) | 5333396..5333671 | + | 276 | WP_003117060.1 | hypothetical protein | - |
| PALA7_RS24765 (PALA7_04906) | 5333741..5334103 | + | 363 | WP_003117061.1 | hypothetical protein | - |
| PALA7_RS24770 (PALA7_04907) | 5334171..5334425 | + | 255 | WP_003117062.1 | hypothetical protein | - |
| PALA7_RS24775 (PALA7_04908) | 5334518..5335123 | + | 606 | WP_003158169.1 | hypothetical protein | - |
| PALA7_RS24780 (PALA7_04909) | 5335153..5336598 | + | 1446 | WP_003158168.1 | DUF6094 domain-containing protein | - |
| PALA7_RS24785 | 5336704..5336865 | + | 162 | Protein_4901 | helicase | - |
| PALA7_RS24790 (PALA7_04911) | 5336891..5337322 | - | 432 | WP_003158166.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| PALA7_RS24795 (PALA7_04912) | 5337427..5338110 | + | 684 | WP_003158165.1 | SOS response-associated peptidase family protein | - |
| PALA7_RS24800 (PALA7_04913) | 5338974..5339348 | + | 375 | WP_003158163.1 | hypothetical protein | - |
| PALA7_RS24805 | 5339373..5339957 | + | 585 | WP_044265603.1 | hypothetical protein | - |
| PALA7_RS24810 (PALA7_04914) | 5339942..5340538 | + | 597 | WP_003158161.1 | VWA domain-containing protein | - |
| PALA7_RS24815 | 5341090..5341482 | + | 393 | WP_003158160.1 | hypothetical protein | - |
| PALA7_RS24820 (PALA7_04915) | 5341501..5341824 | + | 324 | WP_003158159.1 | hypothetical protein | - |
| PALA7_RS24825 (PALA7_04917) | 5342651..5342923 | - | 273 | WP_003125312.1 | hypothetical protein | - |
| PALA7_RS24830 (PALA7_04918) | 5343141..5343839 | + | 699 | WP_023094353.1 | hypothetical protein | - |
| PALA7_RS24835 (PALA7_04919) | 5343850..5344605 | + | 756 | WP_003099814.1 | TIGR03759 family integrating conjugative element protein | - |
| PALA7_RS24840 (PALA7_04920) | 5344590..5345171 | + | 582 | WP_003117072.1 | hypothetical protein | VF |
| PALA7_RS24845 | 5345168..5345668 | + | 501 | WP_003099819.1 | integrating conjugative element protein | - |
| PALA7_RS24850 (PALA7_04921) | 5345677..5345946 | + | 270 | WP_003099820.1 | hypothetical protein | - |
| PALA7_RS24855 (PALA7_04922) | 5345950..5348181 | + | 2232 | WP_003099821.1 | type IV conjugative transfer system coupling protein TraD | - |
| PALA7_RS24860 (PALA7_04923) | 5348181..5348927 | + | 747 | WP_003099824.1 | TIGR03747 family integrating conjugative element membrane protein | - |
| PALA7_RS24865 | 5348945..5349436 | + | 492 | WP_003099826.1 | hypothetical protein | - |
| PALA7_RS24870 (PALA7_04924) | 5349678..5351159 | + | 1482 | WP_003117073.1 | UvrD-helicase domain-containing protein | - |
| PALA7_RS24875 (PALA7_04925) | 5351291..5352400 | + | 1110 | WP_003121016.1 | hypothetical protein | - |
| PALA7_RS24880 | 5352446..5352712 | - | 267 | WP_223195009.1 | DUF2845 domain-containing protein | - |
| PALA7_RS24885 (PALA7_04926) | 5352930..5353229 | + | 300 | WP_003117075.1 | hypothetical protein | - |
| PALA7_RS24890 (PALA7_04927) | 5353323..5353661 | + | 339 | WP_003158157.1 | RAQPRD family integrative conjugative element protein | - |
| PALA7_RS24895 | 5353658..5353897 | + | 240 | WP_003121019.1 | TIGR03758 family integrating conjugative element protein | - |
| PALA7_RS24900 (PALA7_04929) | 5353915..5354271 | + | 357 | WP_003117077.1 | TIGR03745 family integrating conjugative element membrane protein | - |
| PALA7_RS24905 (PALA7_04930) | 5354282..5354668 | + | 387 | WP_003158156.1 | TIGR03750 family conjugal transfer protein | - |
| PALA7_RS24910 (PALA7_04931) | 5354665..5355324 | + | 660 | WP_003158155.1 | TIGR03746 family integrating conjugative element protein | - |
| PALA7_RS24915 (PALA7_04932) | 5355321..5356205 | + | 885 | WP_003125336.1 | TIGR03749 family integrating conjugative element protein | - |
| PALA7_RS24920 (PALA7_04933) | 5356189..5357694 | + | 1506 | WP_003158154.1 | TIGR03752 family integrating conjugative element protein | - |
| PALA7_RS24925 (PALA7_04934) | 5357672..5358115 | + | 444 | WP_003125338.1 | TIGR03751 family conjugal transfer lipoprotein | - |
| PALA7_RS24930 (PALA7_04935) | 5358253..5361057 | + | 2805 | WP_226342062.1 | conjugative transfer ATPase | - |
| PALA7_RS24935 (PALA7_04936) | 5361054..5361338 | + | 285 | WP_003158152.1 | hypothetical protein | - |
| PALA7_RS24940 (PALA7_04937) | 5361335..5361991 | + | 657 | WP_003158151.1 | DsbA family protein | - |
| PALA7_RS24945 (PALA7_04938) | 5361988..5362206 | - | 219 | WP_003158150.1 | hypothetical protein | - |
| PALA7_RS24950 (PALA7_04939) | 5362765..5363952 | + | 1188 | WP_003159689.1 | FAD/NAD(P)-binding oxidoreductase | - |
| PALA7_RS24955 (PALA7_04940) | 5363975..5364397 | + | 423 | WP_003125089.1 | DUF1641 domain-containing protein | - |
| PALA7_RS24960 (PALA7_04941) | 5364387..5365253 | + | 867 | WP_003158148.1 | methyltransferase domain-containing protein | - |
| PALA7_RS24965 | 5365391..5365822 | + | 432 | WP_003158147.1 | TIGR03757 family integrating conjugative element protein | - |
| PALA7_RS24970 (PALA7_04942) | 5365822..5366760 | + | 939 | WP_003158146.1 | TIGR03756 family integrating conjugative element protein | - |
| PALA7_RS24975 (PALA7_04943) | 5366778..5368160 | + | 1383 | WP_003159687.1 | integrating conjugative element protein | - |
| PALA7_RS24980 (PALA7_04944) | 5368160..5368507 | + | 348 | WP_003125096.1 | hypothetical protein | - |
| PALA7_RS24985 (PALA7_04945) | 5368504..5370039 | + | 1536 | WP_003158144.1 | conjugal transfer protein TraG N-terminal domain-containing protein | - |
| PALA7_RS24990 | 5370069..5370422 | - | 354 | WP_003158143.1 | hypothetical protein | - |
| PALA7_RS24995 (PALA7_04946) | 5370541..5370813 | + | 273 | WP_003086148.1 | type II toxin-antitoxin system ParD family antitoxin | - |
| PALA7_RS25000 (PALA7_04947) | 5370817..5371167 | + | 351 | WP_003125102.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| PALA7_RS25005 (PALA7_04948) | 5371545..5380058 | - | 8514 | WP_003125103.1 | Cyclic beta-(1,2)-glucan synthase NdvB | VF |
| PALA7_RS25010 (PALA7_04949) | 5380623..5380886 | + | 264 | WP_003125104.1 | hypothetical protein | - |
| PALA7_RS25015 | 5380900..5381124 | + | 225 | WP_003456722.1 | DUF1652 domain-containing protein | - |
| PALA7_RS25020 (PALA7_04951) | 5381330..5382058 | + | 729 | WP_003125105.1 | Crp/Fnr family transcriptional regulator | - |
| PALA7_RS25025 (PALA7_04952) | 5382129..5382491 | + | 363 | WP_003125106.1 | hypothetical protein | - |
| PALA7_RS25030 (PALA7_04953) | 5382595..5383089 | + | 495 | WP_003158140.1 | hypothetical protein | - |
| PALA7_RS25035 (PALA7_04954) | 5383198..5385216 | + | 2019 | WP_003125107.1 | class I SAM-dependent methyltransferase | - |
| PALA7_RS25040 (PALA7_04955) | 5385372..5386565 | - | 1194 | WP_003158139.1 | fatty acid desaturase | - |
| PALA7_RS25045 | 5386953..5387309 | + | 357 | WP_015060180.1 | hypothetical protein | - |
| PALA7_RS25050 | 5387370..5387522 | - | 153 | WP_153274499.1 | hypothetical protein | - |
| PALA7_RS25055 (PALA7_04956) | 5387521..5389440 | + | 1920 | WP_003158138.1 | MobH family relaxase | - |
| PALA7_RS25060 (PALA7_04957) | 5389437..5390720 | + | 1284 | WP_003158137.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| PALA7_RS25080 (PALA7_04961) | 5391572..5394136 | - | 2565 | WP_003094682.1 | ATP-dependent chaperone ClpB | - |
| PALA7_RS25085 (PALA7_04962) | 5394292..5395020 | - | 729 | WP_003102588.1 | peptidoglycan editing factor PgeF | - |
| PALA7_RS25090 (PALA7_04963) | 5395017..5395979 | - | 963 | WP_003094686.1 | 23S rRNA pseudouridine(1911/1915/1917) synthase RluD | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|