MGE detailed information
MGE type: Genomic_island MGE length: 29662 bp
Accession: NZ_CP104613 Location: 816507..846168 Organism: Escherichia coli strain AHM8C212RI Replicon: chromosome
Accession: NZ_CP104613 Location: 816507..846168 Organism: Escherichia coli strain AHM8C212RI Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| N5856_RS03860 (812625) | 812625..813050 | - | 426 | WP_001189668.1 | type VI secretion system baseplate subunit TssE | - |
| N5856_RS03865 (813055) | 813055..814539 | - | 1485 | WP_094317882.1 | type VI secretion system contractile sheath large subunit | - |
| N5856_RS03870 (814562) | 814562..815065 | - | 504 | WP_000041479.1 | type VI secretion system contractile sheath small subunit | - |
| N5856_RS03875 (815768) | 815768..816286 | + | 519 | WP_001142963.1 | Hcp family type VI secretion system effector | - |
| N5856_RS03880 (816507) | 816507..818465 | + | 1959 | WP_175617189.1 | Actin cross-linking toxin VgrG1 | VF |
| N5856_RS03885 (818465) | 818465..819295 | + | 831 | WP_062883498.1 | DUF4123 domain-containing protein | - |
| N5856_RS03890 (819295) | 819295..820875 | + | 1581 | WP_097741732.1 | hypothetical protein | - |
| N5856_RS03895 (820862) | 820862..821899 | + | 1038 | WP_250308344.1 | hypothetical protein | - |
| N5856_RS03900 (822029) | 822029..822313 | + | 285 | WP_001127502.1 | type VI secretion system PAAR protein | - |
| N5856_RS03905 (822332) | 822332..824320 | + | 1989 | WP_175617191.1 | Actin cross-linking toxin VgrG1 | VF |
| N5856_RS03910 (824320) | 824320..824862 | + | 543 | WP_069913675.1 | DUF6484 domain-containing protein | - |
| N5856_RS03915 (824875) | 824875..826017 | + | 1143 | WP_085008586.1 | hypothetical protein | VF |
| N5856_RS03920 (826023) | 826023..827036 | + | 1014 | WP_077039868.1 | hypothetical protein | - |
| N5856_RS03925 (827041) | 827041..827514 | + | 474 | WP_250308313.1 | DUF4150 domain-containing protein | - |
| N5856_RS03930 (827700) | 827700..828674 | + | 975 | WP_089560179.1 | HNH/endonuclease VII fold toxin-2 domain-containing protein | - |
| N5856_RS03935 (828690) | 828690..829673 | + | 984 | WP_000896206.1 | hypothetical protein | - |
| N5856_RS03940 (829761) | 829761..831404 | + | 1644 | WP_077039872.1 | DUF4150 domain-containing protein | - |
| N5856_RS03945 (831412) | 831412..832440 | + | 1029 | WP_170989014.1 | hypothetical protein | - |
| N5856_RS03950 (832442) | 832442..833677 | + | 1236 | WP_077039904.1 | hypothetical protein | - |
| N5856_RS03955 (833689) | 833689..834102 | + | 414 | WP_000642143.1 | thioredoxin domain-containing protein | - |
| N5856_RS03960 (834527) | 834527..835024 | + | 498 | WP_077039903.1 | hypothetical protein | - |
| N5856_RS03965 (835168) | 835168..835557 | + | 390 | WP_001382844.1 | integrating conjugative element protein | - |
| N5856_RS03970 (835895) | 835895..837031 | + | 1137 | Protein_766 | ISAs1 family transposase ISEc1 | Transposase |
| N5856_RS03975 (837080) | 837080..837343 | + | 264 | WP_094317943.1 | hypothetical protein | - |
| N5856_RS03980 (837453) | 837453..838223 | - | 771 | WP_094317942.1 | 2-oxoglutaramate amidase | - |
| N5856_RS03985 (838404) | 838404..838850 | + | 447 | WP_001308392.1 | Ivy family C-type lysozyme inhibitor | - |
| N5856_RS03990 (838893) | 838893..841337 | - | 2445 | WP_094317941.1 | Acyl-coenzyme A dehydrogenase | VF |
| N5856_RS03995 (841577) | 841577..842155 | + | 579 | WP_000284050.1 | Phosphoheptose isomerase | VF |
| N5856_RS04000 (842361) | 842361..843128 | + | 768 | WP_094317940.1 | class II glutamine amidotransferase | - |
| N5856_RS04005 (843099) | 843099..843839 | - | 741 | WP_001225679.1 | peptidoglycan meso-diaminopimelic acid protein amidase | - |
| N5856_RS04010 (843995) | 843995..844273 | - | 279 | WP_000615977.1 | type II toxin-antitoxin system mRNA interferase toxin YafQ | Toxin Detail |
| N5856_RS04015 (844276) | 844276..844536 | - | 261 | WP_000729709.1 | type II toxin-antitoxin system antitoxin DinJ | Antitoxin Detail |
| N5856_RS04020 (844746) | 844746..845495 | + | 750 | WP_094317939.1 | hypothetical protein | VF |
| N5856_RS04025 (845671) | 845671..846168 | + | 498 | WP_000006266.1 | REP-associated tyrosine transposase RayT | - |
| N5856_RS04030 (846354) | 846354..848447 | - | 2094 | WP_097702245.1 | flagellar biosynthesis protein FlhA | - |
| N5856_RS04035 (848431) | 848431..849570 | - | 1140 | WP_000785662.1 | flagellar type III secretion system protein FlhB | - |
| N5856_RS04040 (849560) | 849560..850342 | - | 783 | WP_001260507.1 | flagellar biosynthetic protein FliR | - |
| N5856_RS04045 (850344) | 850344..850616 | - | 273 | WP_000958542.1 | flagellar biosynthetic protein FliQ | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|