MGE detailed information
MGE type: Prophage MGE length: 50300 bp
Accession: NZ_CP104472 Location: 329561..379860 Organism: Escherichia coli strain UC4224 Replicon: chromosome
Accession: NZ_CP104472 Location: 329561..379860 Organism: Escherichia coli strain UC4224 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| N4S17_RS01495 (326074) | 326074..326820 | + | 747 | WP_000636571.1 | bifunctional NADP-dependent 3-hydroxy acid dehydrogenase/3-hydroxypropionate dehydrogenase YdfG | - |
| N4S17_RS01500 (326909) | 326909..327595 | + | 687 | WP_000215549.1 | DNA-binding transcriptional regulator rspR | - |
| N4S17_RS01505 (327773) | 327773..327976 | + | 204 | WP_000214712.1 | putative selenium delivery protein YdfZ | - |
| N4S17_RS01510 (328012) | 328012..329472 | - | 1461 | WP_198458812.1 | mannitol dehydrogenase family protein | - |
| N4S17_RS01515 (329561) | 329561..330844 | - | 1284 | Protein_302 | MHS family MFS transporter YdfJ | - |
| N4S17_RS01520 (331445) | 331445..331558 | + | 114 | WP_120795384.1 | YnaM/YnfT family protein | - |
| N4S17_RS01525 (331627) | 331627..331860 | + | 234 | WP_000836768.1 | cold shock protein YdfK | - |
| N4S17_RS01530 (332177) | 332177..332767 | + | 591 | WP_000086522.1 | Tn3 family transposase TnpR_ISSba14 | Transposase |
| N4S17_RS01535 (332865) | 332865..333113 | - | 249 | Protein_306 | tail fiber assembly protein | - |
| N4S17_RS01545 (334369) | 334369..334701 | - | 333 | Protein_308 | tail fiber assembly protein | - |
| N4S17_RS01550 (334701) | 334701..337772 | - | 3072 | WP_062865753.1 | phage tail protein | - |
| N4S17_RS01555 (337837) | 337837..338436 | - | 600 | WP_001233073.1 | Outer membrane protein X | VF |
| N4S17_RS01560 (338507) | 338507..341920 | - | 3414 | WP_261306969.1 | host specificity protein J | - |
| N4S17_RS01565 (341981) | 341981..342553 | - | 573 | WP_260745678.1 | tail assembly protein | - |
| N4S17_RS01570 (342550) | 342550..343293 | - | 744 | WP_032295755.1 | C40 family peptidase | - |
| N4S17_RS01575 (343298) | 343298..343996 | - | 699 | WP_001499538.1 | phage minor tail protein L | - |
| N4S17_RS01580 (343996) | 343996..344325 | - | 330 | WP_000847379.1 | phage tail protein | - |
| N4S17_RS01585 (344322) | 344322..346887 | - | 2566 | Protein_316 | phage tail tape measure protein | - |
| N4S17_RS01590 (346880) | 346880..347314 | - | 435 | WP_000459457.1 | phage tail assembly protein T | - |
| N4S17_RS01595 (347296) | 347296..347718 | - | 423 | WP_097435709.1 | phage minor tail protein G | - |
| N4S17_RS01600 (347734) | 347734..348474 | - | 741 | WP_001564531.1 | phage tail protein | - |
| N4S17_RS01605 (348482) | 348482..348877 | - | 396 | WP_000683105.1 | phage minor tail U family protein | - |
| N4S17_RS01610 (348874) | 348874..349452 | - | 579 | WP_000985132.1 | phage tail protein | - |
| N4S17_RS01615 (349443) | 349443..349817 | - | 375 | WP_000752961.1 | head-tail joining protein | - |
| N4S17_RS01620 (349829) | 349829..350224 | - | 396 | WP_000158868.1 | DNA-packaging protein FI | - |
| N4S17_RS01625 (350266) | 350266..351291 | - | 1026 | WP_198458829.1 | major capsid protein | - |
| N4S17_RS01630 (351347) | 351347..351679 | - | 333 | WP_086354636.1 | head decoration protein | - |
| N4S17_RS01635 (351689) | 351689..353007 | - | 1319 | Protein_326 | S49 family peptidase | - |
| N4S17_RS01640 (352988) | 352988..354595 | - | 1608 | Protein_327 | phage portal protein | - |
| N4S17_RS01645 (354592) | 354592..354798 | - | 207 | WP_000198153.1 | gpW family protein | - |
| N4S17_RS01650 (354795) | 354795..356720 | - | 1926 | WP_001027269.1 | phage terminase large subunit family protein | - |
| N4S17_RS01655 (356695) | 356695..357240 | - | 546 | WP_000453611.1 | DNA-packaging protein | - |
| N4S17_RS01660 (357629) | 357629..357862 | + | 234 | WP_001368374.1 | YlcI/YnfO family protein | - |
| N4S17_RS01665 (357920) | 357920..358330 | + | 411 | WP_000373090.1 | DUF1398 domain-containing protein | - |
| N4S17_RS01670 (358482) | 358482..358655 | - | 174 | WP_001019606.1 | addiction module toxin, GnsA/GnsB family | - |
| N4S17_RS01675 (358827) | 358827..358982 | - | 156 | WP_001309517.1 | protein YnfN | - |
| N4S17_RS01680 (359062) | 359062..359127 | - | 66 | WP_120795388.1 | small protein YnfR | - |
| N4S17_RS01685 (359130) | 359130..359318 | - | 189 | WP_071524604.1 | cold-shock protein | - |
| N4S17_RS01690 (359329) | 359329..359541 | - | 213 | WP_000066495.1 | cold shock protein CspI | - |
| N4S17_RS01695 (359905) | 359905..360402 | - | 498 | WP_028985485.1 | DUF2514 domain-containing protein | - |
| N4S17_RS01700 (360399) | 360399..360932 | - | 534 | WP_001092971.1 | lysozyme | - |
| N4S17_RS01705 (360929) | 360929..361240 | - | 312 | WP_000189916.1 | YdfR family protein | - |
| N4S17_RS01710 (361245) | 361245..361460 | - | 216 | WP_000839590.1 | phage lysis protein EssD | - |
| N4S17_RS01715 (361680) | 361680..361850 | + | 171 | WP_211180497.1 | putative zinc-binding protein YnfU | - |
| N4S17_RS01720 (362214) | 362214..362429 | - | 216 | WP_000066484.1 | cold shock-like protein CspB | - |
| N4S17_RS01725 (362730) | 362730..362942 | + | 213 | WP_000087756.1 | cold shock-like protein CspF | - |
| N4S17_RS01730 (362997) | 362997..363086 | + | 90 | WP_120795389.1 | hypothetical protein | - |
| N4S17_RS01735 (363364) | 363364..364116 | - | 753 | WP_001047135.1 | antitermination protein | - |
| N4S17_RS01740 (364130) | 364130..365179 | - | 1050 | WP_028985484.1 | DUF968 domain-containing protein | - |
| N4S17_RS01745 (365181) | 365181..365459 | - | 279 | WP_012304870.1 | hypothetical protein | - |
| N4S17_RS01750 (365526) | 365526..365777 | - | 252 | WP_000980994.1 | protein Rem | - |
| N4S17_RS01755 (365994) | 365994..366149 | - | 156 | WP_000813254.1 | type I toxin-antitoxin system toxin HokD | - |
| N4S17_RS01760 (366221) | 366221..366508 | - | 288 | WP_000323025.1 | type II toxin-antitoxin system mRNA interferase RelE | Toxin Detail |
| N4S17_RS01765 (366508) | 366508..366747 | - | 240 | WP_000534858.1 | type II toxin-antitoxin system antitoxin RelB | Antitoxin Detail |
| N4S17_RS01770 (366772) | 366772..367077 | + | 306 | WP_001326990.1 | protein YdfV | - |
| N4S17_RS01775 (367280) | 367280..367612 | + | 333 | WP_001301033.1 | FlxA-like family protein | - |
| N4S17_RS01780 (368049) | 368049..368198 | - | 150 | WP_011443592.1 | ISNCY family transposase ISCARN112 | Transposase |
| N4S17_RS01785 (368319) | 368319..369341 | - | 1023 | Protein_356 | ISNCY family transposase ISCARN112 | Transposase |
| N4S17_RS01790 (370131) | 370131..370418 | - | 288 | Protein_357 | hypothetical protein | - |
| N4S17_RS01795 (370896) | 370896..371385 | - | 490 | Protein_358 | class I SAM-dependent methyltransferase | - |
| N4S17_RS01800 (371382) | 371382..371804 | - | 423 | WP_001151262.1 | DUF977 family protein | - |
| N4S17_RS01805 (371845) | 371845..372810 | - | 966 | WP_000054512.1 | hypothetical protein | - |
| N4S17_RS01810 (372791) | 372791..373312 | - | 522 | WP_000705358.1 | toxin YdaT family protein | - |
| N4S17_RS01815 (373296) | 373296..373523 | - | 228 | WP_000921596.1 | Cro/CI family transcriptional regulator | - |
| N4S17_RS01820 (373604) | 373604..374011 | + | 408 | WP_000381212.1 | helix-turn-helix domain-containing protein | - |
| N4S17_RS01825 (374180) | 374180..374335 | + | 156 | WP_000379575.1 | DUF1391 family protein | - |
| N4S17_RS01830 (374337) | 374337..374465 | + | 129 | WP_000344937.1 | protein YdfB | - |
| N4S17_RS01835 (374495) | 374495..374713 | + | 219 | WP_001171942.1 | protein YdfC | - |
| N4S17_RS01840 (375281) | 375281..375469 | + | 189 | WP_000854559.1 | cell division inhibition protein DicB | - |
| N4S17_RS01845 (375466) | 375466..375657 | + | 192 | WP_001083297.1 | lysis protein YdfD | - |
| N4S17_RS01850 (375750) | 375750..378221 | + | 2472 | WP_000048342.1 | exonuclease | - |
| N4S17_RS01855 (378294) | 378294..378545 | + | 252 | WP_000005552.1 | excisionase family protein | - |
| N4S17_RS01860 (378580) | 378580..379860 | + | 1281 | WP_000876958.1 | Putative defective protein IntQ ; Integrase | Integrase |
| N4S17_RS01865 (380048) | 380048..381067 | - | 1020 | WP_000836079.1 | Zn-dependent oxidoreductase | - |
| N4S17_RS01870 (381079) | 381079..382293 | - | 1215 | WP_001295394.1 | starvation-sensing protein RspA | - |
| N4S17_RS01875 (382499) | 382499..382825 | - | 327 | WP_000598292.1 | YnfA family protein | - |
| N4S17_RS01880 (382960) | 382960..383301 | + | 342 | WP_000705197.1 | DUF1283 family protein | - |
| N4S17_RS01885 (383336) | 383336..383896 | + | 561 | WP_001138581.1 | spermidine N1-acetyltransferase | - |
| N4S17_RS01890 (383899) | 383899..384609 | - | 711 | WP_001321287.1 | YnfC family lipoprotein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|