MGE detailed information
MGE type: Prophage MGE length: 36670 bp
Accession: NZ_CP104384 Location: 2259193..2295862 Organism: Escherichia coli strain JNQH498 Replicon: chromosome
Accession: NZ_CP104384 Location: 2259193..2295862 Organism: Escherichia coli strain JNQH498 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| KIG00_RS10990 (2255092) | 2255092..2256312 | + | 1221 | WP_000225262.1 | DNA-binding transcriptional repressor Mlc | - |
| KIG00_RS10995 (2256437) | 2256437..2257132 | + | 696 | WP_000919231.1 | dethiobiotin synthase | - |
| KIG00_RS11000 (2257085) | 2257085..2258377 | - | 1293 | WP_001315626.1 | voltage-gated ClC-type chloride channel ClcB | - |
| KIG00_RS11005 (2258536) | 2258536..2259150 | - | 615 | WP_000148710.1 | Tat proofreading chaperone DmsD | - |
| KIG00_RS11010 (2259193) | 2259193..2260047 | - | 855 | WP_000526503.1 | dimethyl sulfoxide reductase anchor subunit family protein | - |
| KIG00_RS11015 (2260049) | 2260049..2260666 | - | 618 | WP_000213028.1 | dimethylsulfoxide reductase subunit B | - |
| KIG00_RS11020 (2260677) | 2260677..2263100 | - | 2424 | WP_001340362.1 | DmsA/YnfE/YnfF family dimethyl sulfoxide reductase | - |
| KIG00_RS11025 (2263161) | 2263161..2265587 | - | 2427 | WP_214140039.1 | DmsA/YnfE/YnfF family dimethyl sulfoxide reductase | - |
| KIG00_RS11030 (2265786) | 2265786..2266091 | - | 306 | WP_001300836.1 | DUF1161 domain-containing protein | - |
| KIG00_RS11035 (2266199) | 2266199..2266909 | + | 711 | WP_001321287.1 | YnfC family lipoprotein | - |
| KIG00_RS11040 (2266912) | 2266912..2267472 | - | 561 | WP_001138581.1 | spermidine N1-acetyltransferase | - |
| KIG00_RS11045 (2267507) | 2267507..2267848 | - | 342 | WP_000705211.1 | DUF1283 family protein | - |
| KIG00_RS11050 (2267983) | 2267983..2268309 | + | 327 | WP_000598292.1 | YnfA family protein | - |
| KIG00_RS11055 (2268515) | 2268515..2269729 | + | 1215 | WP_001295394.1 | starvation-sensing protein RspA | - |
| KIG00_RS11060 (2269741) | 2269741..2270748 | + | 1008 | WP_214140040.1 | Zn-dependent oxidoreductase | - |
| KIG00_RS11065 (2270936) | 2270936..2272216 | - | 1281 | WP_000876958.1 | Putative defective protein IntQ ; Integrase | Integrase |
| KIG00_RS11070 (2272251) | 2272251..2272502 | - | 252 | WP_000005552.1 | excisionase family protein | - |
| KIG00_RS11075 (2272575) | 2272575..2274557 | - | 1983 | Protein_2164 | 3'-5' exoribonuclease | - |
| KIG00_RS11080 (2274547) | 2274547..2274798 | + | 252 | Protein_2165 | DUF977 family protein | - |
| KIG00_RS11085 (2274795) | 2274795..2275284 | + | 490 | Protein_2166 | class I SAM-dependent methyltransferase | - |
| KIG00_RS11090 (2275875) | 2275875..2277043 | + | 1169 | WP_094249652.1 | IS3 family transposase ISLad1 | Transposase |
| KIG00_RS11095 (2277068) | 2277068..2277435 | + | 368 | Protein_2168 | hypothetical protein | - |
| KIG00_RS11100 (2278091) | 2278091..2279113 | + | 1023 | Protein_2169 | ISNCY family transposase ISCARN112 | Transposase |
| KIG00_RS11105 (2279234) | 2279234..2279383 | + | 150 | WP_011443592.1 | ISNCY family transposase ISCARN112 | Transposase |
| KIG00_RS11110 (2279820) | 2279820..2280152 | - | 333 | WP_001301033.1 | FlxA-like family protein | - |
| KIG00_RS11115 (2280355) | 2280355..2280660 | - | 306 | WP_001326990.1 | protein YdfV | - |
| KIG00_RS11120 (2280685) | 2280685..2280924 | + | 240 | WP_000534858.1 | type II toxin-antitoxin system antitoxin RelB | Antitoxin Detail |
| KIG00_RS11125 (2280924) | 2280924..2281211 | + | 288 | WP_000323025.1 | type II toxin-antitoxin system mRNA interferase RelE | Toxin Detail |
| KIG00_RS11130 (2281283) | 2281283..2281438 | + | 156 | WP_000813254.1 | type I toxin-antitoxin system toxin HokD | - |
| KIG00_RS11135 (2281655) | 2281655..2281906 | + | 252 | WP_000980994.1 | protein Rem | - |
| KIG00_RS11140 (2281973) | 2281973..2282251 | + | 279 | WP_012304870.1 | hypothetical protein | - |
| KIG00_RS11145 (2282253) | 2282253..2283302 | + | 1050 | WP_001265198.1 | DUF968 domain-containing protein | - |
| KIG00_RS11150 (2283316) | 2283316..2284068 | + | 753 | WP_001047135.1 | antitermination protein | - |
| KIG00_RS11155 (2284346) | 2284346..2284435 | - | 90 | WP_120795389.1 | hypothetical protein | - |
| KIG00_RS11160 (2284490) | 2284490..2284702 | - | 213 | WP_000087756.1 | cold shock-like protein CspF | - |
| KIG00_RS11165 (2285003) | 2285003..2285218 | + | 216 | WP_000066484.1 | cold shock-like protein CspB | - |
| KIG00_RS11170 (2285582) | 2285582..2285752 | - | 171 | WP_211180497.1 | putative zinc-binding protein YnfU | - |
| KIG00_RS11175 (2285972) | 2285972..2286187 | + | 216 | WP_000839590.1 | phage lysis protein EssD | - |
| KIG00_RS11180 (2286192) | 2286192..2286503 | + | 312 | WP_000189916.1 | YdfR family protein | - |
| KIG00_RS11185 (2286500) | 2286500..2287033 | + | 534 | WP_001092971.1 | lysozyme | - |
| KIG00_RS11190 (2287030) | 2287030..2287527 | + | 498 | WP_001071769.1 | DUF2514 domain-containing protein | - |
| KIG00_RS11195 (2287889) | 2287889..2288101 | + | 213 | WP_000066495.1 | cold shock protein CspI | - |
| KIG00_RS11200 (2288112) | 2288112..2288300 | + | 189 | WP_071524604.1 | cold-shock protein | - |
| KIG00_RS11205 (2288303) | 2288303..2288368 | + | 66 | WP_120795388.1 | small protein YnfR | - |
| KIG00_RS11210 (2288448) | 2288448..2288603 | + | 156 | WP_001309517.1 | protein YnfN | - |
| KIG00_RS11215 (2288775) | 2288775..2288948 | + | 174 | WP_001019606.1 | addiction module toxin, GnsA/GnsB family | - |
| KIG00_RS11220 (2289100) | 2289100..2289510 | - | 411 | WP_000373090.1 | DUF1398 domain-containing protein | - |
| KIG00_RS11225 (2289568) | 2289568..2289801 | - | 234 | WP_001368374.1 | YlcI/YnfO family protein | - |
| KIG00_RS11230 (2290190) | 2290190..2290447 | + | 258 | WP_001310828.1 | terminase small subunit | - |
| KIG00_RS11235 (2290422) | 2290422..2291681 | + | 1260 | Protein_2196 | phage tail protein | - |
| KIG00_RS11240 (2291768) | 2291768..2291980 | + | 213 | Protein_2197 | phage tail protein | - |
| KIG00_RS11245 (2291980) | 2291980..2292555 | + | 576 | WP_000885600.1 | tail fiber assembly protein | - |
| KIG00_RS11250 (2292653) | 2292653..2293243 | - | 591 | WP_000086522.1 | Tn3 family transposase TnpR_ISSba14 | Transposase |
| KIG00_RS11255 (2293560) | 2293560..2293793 | - | 234 | WP_000836768.1 | cold shock protein YdfK | - |
| KIG00_RS11260 (2293862) | 2293862..2293975 | - | 114 | WP_120795384.1 | YnaM/YnfT family protein | - |
| KIG00_RS11265 (2294579) | 2294579..2295862 | + | 1284 | Protein_2202 | MHS family MFS transporter YdfJ | - |
| KIG00_RS11270 (2295951) | 2295951..2297411 | + | 1461 | WP_000527809.1 | mannitol dehydrogenase family protein | - |
| KIG00_RS11275 (2297446) | 2297446..2297649 | - | 204 | WP_000214712.1 | putative selenium delivery protein YdfZ | - |
| KIG00_RS11280 (2297826) | 2297826..2298512 | - | 687 | WP_000215549.1 | DNA-binding transcriptional regulator rspR | - |
| KIG00_RS11285 (2298601) | 2298601..2299347 | - | 747 | WP_000636571.1 | bifunctional NADP-dependent 3-hydroxy acid dehydrogenase/3-hydroxypropionate dehydrogenase YdfG | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|