MGE detailed information
MGE type: Prophage MGE length: 75915 bp
Accession: NZ_CP104358 Location: 2639583..2715497 Organism: Salmonella enterica strain PNUSAS119065 Replicon: chromosome
Accession: NZ_CP104358 Location: 2639583..2715497 Organism: Salmonella enterica strain PNUSAS119065 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| N4275_RS12890 () | 2635312..2635770 | + | 459 | WP_000156284.1 | DUF986 family protein | - |
| N4275_RS12895 () | 2636180..2636746 | + | 567 | WP_001518359.1 | manganese efflux pump MntP | - |
| N4275_RS12900 () | 2636743..2637552 | - | 810 | WP_000010923.1 | 23S rRNA (guanine(745)-N(1))-methyltransferase | - |
| N4275_RS12905 () | 2637618..2639363 | - | 1746 | WP_000730322.1 | peptidoglycan glycosyltransferase FtsI | - |
| N4275_RS12910 () | 2639583..2639792 | - | 210 | WP_001062678.1 | transcription antiterminator/RNA stability regulator CspE | - |
| N4275_RS12915 () | 2639805..2639948 | - | 144 | WP_001537930.1 | DUF2627 domain-containing protein | - |
| N4275_RS12920 () | 2640597..2640884 | - | 288 | WP_001000660.1 | YebO family protein | - |
| N4275_RS12925 () | 2640955..2641098 | - | 144 | WP_000714547.1 | PhoP/PhoQ regulator MgrB | - |
| N4275_RS12930 () | 2641256..2641495 | + | 240 | WP_001236777.1 | invasion protein YobH | - |
| N4275_RS12935 () | 2641707..2642498 | - | 792 | WP_001262195.1 | DNA-binding transcriptional regulator KdgR | - |
| N4275_RS12940 () | 2642674..2644047 | + | 1374 | WP_000416139.1 | MFS transporter | - |
| N4275_RS12945 () | 2644095..2644976 | - | 882 | WP_000984498.1 | protease HtpX | - |
| N4275_RS12950 () | 2645170..2647218 | - | 2049 | WP_001091237.1 | carboxy terminal-processing peptidase | - |
| N4275_RS12955 () | 2647238..2647924 | - | 687 | WP_000431401.1 | RNA chaperone ProQ | - |
| N4275_RS12960 () | 2648022..2648519 | - | 498 | WP_001518229.1 | GAF domain-containing protein | - |
| N4275_RS12965 () | 2648648..2649931 | + | 1284 | WP_001207294.1 | membrane integrity lipid transport subunit YebS | - |
| N4275_RS12970 () | 2649900..2652533 | + | 2634 | WP_001529852.1 | hypothetical protein | VF |
| N4275_RS12975 () | 2652611..2654050 | + | 1440 | WP_001531515.1 | 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF | - |
| N4275_RS12980 () | 2654168..2654404 | + | 237 | WP_024131108.1 | YebV family protein | - |
| N4275_RS12985 () | 2654515..2654706 | + | 192 | WP_000457838.1 | DUF1482 family protein | - |
| N4275_RS12990 () | 2654725..2655375 | - | 651 | WP_000986173.1 | protein-serine/threonine phosphatase | - |
| N4275_RS12995 () | 2655599..2655763 | - | 165 | WP_001134856.1 | membrane protein | - |
| N4275_RS13000 () | 2656048..2656770 | - | 723 | WP_000182071.1 | hypothetical protein | VF |
| N4275_RS13005 () | 2657454..2657849 | + | 396 | WP_000422882.1 | DUF1398 domain-containing protein | - |
| N4275_RS13010 () | 2658179..2658655 | + | 477 | WP_000030934.1 | hypothetical protein | - |
| N4275_RS13015 () | 2659028..2659447 | - | 420 | WP_001025515.1 | GNAT family N-acetyltransferase | - |
| N4275_RS13020 () | 2659820..2660089 | + | 270 | WP_001576019.1 | hypothetical protein | - |
| N4275_RS13025 () | 2660255..2660395 | + | 141 | WP_001576018.1 | hypothetical protein | - |
| N4275_RS13030 () | 2660541..2661748 | - | 1208 | Protein_2549 | IS256 family transposase ISEc39 | Transposase |
| N4275_RS13035 () | 2661818..2662284 | + | 467 | Protein_2550 | tyrosine-type recombinase/integrase | - |
| N4275_RS13040 () | 2663534..2664448 | + | 915 | WP_001233445.1 | DMT family transporter | - |
| N4275_RS13045 () | 2664581..2664739 | + | 159 | WP_000480735.1 | DUF5993 family protein | - |
| N4275_RS13050 () | 2664749..2665363 | + | 615 | WP_000848072.1 | disulfide bond formation protein B | - |
| N4275_RS13055 () | 2665690..2665922 | - | 233 | Protein_2554 | helix-turn-helix domain-containing protein | - |
| N4275_RS13060 () | 2666531..2666632 | - | 102 | Protein_2555 | arsenic transporter | - |
| N4275_RS13065 () | 2666623..2666803 | + | 181 | Protein_2556 | IS3 family transposase | - |
| N4275_RS13070 () | 2667193..2667393 | + | 201 | WP_012543349.1 | PagK family vesicle-borne virulence factor | - |
| N4275_RS13075 () | 2667490..2668001 | - | 512 | Protein_2558 | tail fiber assembly protein | - |
| N4275_RS13080 () | 2668014..2668301 | - | 288 | Protein_2559 | macro domain-containing protein | - |
| N4275_RS13085 () | 2668311..2669542 | - | 1232 | Protein_2560 | tail fiber protein | - |
| N4275_RS13090 () | 2669541..2670108 | - | 568 | Protein_2561 | phage terminase large subunit family protein | - |
| N4275_RS13095 () | 2670095..2670586 | - | 492 | WP_000348541.1 | DUF1441 family protein | - |
| N4275_RS13100 () | 2670641..2670829 | + | 189 | WP_001576014.1 | hypothetical protein | - |
| N4275_RS13105 () | 2670894..2671061 | + | 168 | WP_000789530.1 | lytic enzyme | - |
| N4275_RS13110 () | 2671318..2671851 | - | 534 | WP_001050883.1 | DUF2514 domain-containing protein | - |
| N4275_RS13115 () | 2671905..2672096 | - | 192 | Protein_2566 | glycoside hydrolase family 19 protein | - |
| N4275_RS13120 () | 2672085..2672546 | + | 462 | Protein_2567 | DNA breaking-rejoining protein | - |
| N4275_RS13125 () | 2672810..2673732 | + | 923 | Protein_2568 | hypothetical protein ; Integrase | Integrase |
| N4275_RS13130 () | 2674677..2675477 | + | 801 | WP_001536069.1 | hypothetical protein | - |
| N4275_RS13135 () | 2675506..2675747 | - | 242 | Protein_2570 | recombinase family protein | - |
| N4275_RS13140 () | 2675957..2676679 | + | 723 | WP_000161704.1 | hypothetical protein | VF |
| N4275_RS13145 () | 2676881..2677225 | - | 345 | Protein_2572 | tail fiber assembly protein | - |
| N4275_RS13150 () | 2677230..2678093 | - | 864 | WP_072100756.1 | DUF1983 domain-containing protein | - |
| N4275_RS13155 () | 2678133..2680464 | - | 2332 | Protein_2574 | host specificity protein J | - |
| N4275_RS13160 () | 2680464..2680724 | - | 261 | Protein_2575 | C40 family peptidase | - |
| N4275_RS13165 () | 2680734..2681429 | - | 696 | WP_001152416.1 | phage minor tail protein L | - |
| N4275_RS13170 () | 2681519..2682052 | + | 534 | WP_000877926.1 | hypothetical protein | VF |
| N4275_RS13175 () | 2682169..2682348 | - | 180 | WP_000578541.1 | Ail/Lom family outer membrane beta-barrel protein | - |
| N4275_RS13180 () | 2682428..2682739 | - | 312 | Protein_2579 | DUF1441 family protein | - |
| N4275_RS13185 () | 2682947..2683426 | - | 480 | WP_001541990.1 | lysis protein | - |
| N4275_RS13190 () | 2683444..2683896 | - | 453 | WP_000984586.1 | glycoside hydrolase family protein | - |
| N4275_RS13195 () | 2683880..2684209 | - | 330 | WP_001574216.1 | phage holin, lambda family | - |
| N4275_RS13200 () | 2684485..2685171 | + | 687 | WP_001574215.1 | type III secretion system effector protease GtgA | - |
| N4275_RS13205 () | 2685532..2685981 | + | 450 | WP_000798708.1 | hypothetical protein | - |
| N4275_RS13210 () | 2686355..2686882 | - | 528 | WP_000971762.1 | hypothetical protein | - |
| N4275_RS13215 () | 2686976..2687665 | - | 690 | WP_001097218.1 | bacteriophage antitermination protein Q | - |
| N4275_RS13220 () | 2687662..2687798 | - | 137 | Protein_2587 | YlcG family protein | - |
| N4275_RS13225 () | 2687795..2687935 | - | 141 | Protein_2588 | recombination protein NinG | - |
| N4275_RS13230 () | 2688019..2688618 | - | 600 | WP_000940753.1 | DUF1367 family protein | - |
| N4275_RS13235 () | 2688682..2688900 | - | 219 | WP_001524708.1 | hypothetical protein | - |
| N4275_RS13240 () | 2689202..2689300 | - | 99 | WP_223151200.1 | hypothetical protein | - |
| N4275_RS13245 () | 2689619..2691598 | - | 1980 | WP_001237395.1 | alkyl sulfatase dimerization domain-containing protein | - |
| N4275_RS13250 () | 2692012..2692290 | + | 279 | WP_001575998.1 | excisionase | - |
| N4275_RS13255 () | 2692265..2693344 | + | 1080 | WP_000087636.1 | hypothetical protein ; Integrase | Integrase |
| - | 2693482..2693627 | + | 146 | - | - | Antitoxin Detail |
| - | 2693484..2693587 | - | 104 | - | - | Toxin Detail |
| N4275_RS13260 () | 2693727..2694080 | - | 354 | WP_000722370.1 | YebY family protein | - |
| N4275_RS13265 () | 2694097..2694972 | - | 876 | WP_000979694.1 | copper homeostasis membrane protein CopD | - |
| N4275_RS13270 () | 2694973..2695347 | - | 375 | WP_000168393.1 | CopC domain-containing protein YobA | - |
| N4275_RS13275 () | 2695485..2695715 | + | 231 | WP_000856224.1 | DNA polymerase III subunit theta | - |
| N4275_RS13280 () | 2695823..2696479 | + | 657 | WP_000100257.1 | carbon-nitrogen hydrolase family protein | - |
| N4275_RS13285 () | 2696503..2697201 | + | 699 | WP_000944288.1 | exodeoxyribonuclease X | - |
| N4275_RS13290 () | 2697238..2699289 | - | 2052 | WP_000936990.1 | oligopeptidase B | - |
| N4275_RS13295 () | 2699502..2700161 | - | 660 | WP_000024715.1 | tellurite resistance TerB family protein | - |
| N4275_RS13300 () | 2700255..2700608 | - | 354 | WP_001042123.1 | protein YebF | - |
| N4275_RS13305 () | 2700676..2700966 | - | 291 | WP_000257723.1 | DNA damage-inducible protein YebG | - |
| N4275_RS13310 () | 2701097..2702275 | + | 1179 | WP_000173418.1 | formate-dependent phosphoribosylglycinamide formyltransferase | - |
| N4275_RS13315 () | 2702375..2703016 | - | 642 | WP_000800494.1 | bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase | - |
| N4275_RS13320 () | 2703054..2704865 | - | 1812 | WP_001069113.1 | phosphogluconate dehydratase | - |
| N4275_RS13325 () | 2705100..2706575 | - | 1476 | WP_000301711.1 | glucose-6-phosphate dehydrogenase | - |
| N4275_RS13330 () | 2706917..2707786 | + | 870 | WP_001056720.1 | MurR/RpiR family transcriptional regulator | - |
| N4275_RS13335 () | 2707910..2709352 | + | 1443 | WP_000091156.1 | pyruvate kinase | - |
| N4275_RS13340 () | 2709425..2710396 | - | 972 | WP_000448401.1 | Lipid A biosynthesis myristoyltransferase | VF |
| N4275_RS13345 () | 2710513..2711832 | - | 1320 | WP_001184028.1 | murein DD-endopeptidase MepM | - |
| N4275_RS13350 () | 2711848..2712792 | - | 945 | WP_000939597.1 | zinc ABC transporter substrate-binding protein ZnuA | - |
| N4275_RS13355 () | 2712871..2713626 | + | 756 | WP_000203023.1 | Vitamin B12 import ATP-binding protein BtuD | VF |
| N4275_RS13360 () | 2713623..2714408 | + | 786 | WP_000571508.1 | hypothetical protein | VF |
| N4275_RS13365 () | 2714487..2715497 | - | 1011 | WP_000568508.1 | Holliday junction ATP-dependent DNA helicase RuvB | VF |
| N4275_RS13370 () | 2715506..2716117 | - | 612 | WP_000580335.1 | Holliday junction branch migration protein RuvA | - |
| N4275_RS13375 () | 2716477..2717169 | - | 693 | WP_001680382.1 | hypothetical protein | - |
| N4275_RS13380 () | 2717378..2717977 | + | 600 | WP_000716756.1 | YebB family permuted papain-like enzyme | - |
| N4275_RS13385 () | 2717979..2718500 | - | 522 | WP_000022509.1 | crossover junction endodeoxyribonuclease RuvC | - |
| N4275_RS13390 () | 2718537..2719277 | - | 741 | WP_000907242.1 | YebC/PmpR family DNA-binding transcriptional regulator | - |
| N4275_RS13395 () | 2719307..2719759 | - | 453 | WP_000653693.1 | dihydroneopterin triphosphate diphosphatase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|