MGE detailed information
MGE type: Genomic_island MGE length: 22659 bp
Accession: NZ_CP104328 Location: 597287..619945 Organism: Escherichia coli strain THB42-F2 Replicon: chromosome
Accession: NZ_CP104328 Location: 597287..619945 Organism: Escherichia coli strain THB42-F2 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| N0499_RS02880 (592737) | 592737..593597 | + | 861 | WP_000809262.1 | 16S rRNA (cytidine(1402)-2'-O)-methyltransferase | - |
| N0499_RS02885 (593640) | 593640..594731 | - | 1092 | WP_000816992.1 | fimbrial protein | - |
| N0499_RS02890 (594742) | 594742..597258 | - | 2517 | WP_001355538.1 | fimbria/pilus outer membrane usher protein | - |
| N0499_RS02895 (597287) | 597287..597982 | - | 696 | WP_072647308.1 | hypothetical protein | VF |
| N0499_RS02900 (598062) | 598062..598646 | - | 585 | WP_001045432.1 | fimbrial protein | - |
| N0499_RS02905 (599047) | 599047..599802 | - | 756 | WP_001311150.1 | galactosamine-6-phosphate isomerase | - |
| N0499_RS02910 (599803) | 599803..600594 | - | 792 | WP_000534347.1 | PTS galactosamine transporter subunit IID | - |
| N0499_RS02915 (600584) | 600584..601387 | - | 804 | WP_000544489.1 | PTS galactosamine transporter subunit IIC | - |
| N0499_RS02920 (601426) | 601426..601902 | - | 477 | WP_000203711.1 | PTS galactosamine transporter subunit IIB | - |
| N0499_RS02925 (602069) | 602069..602929 | - | 861 | WP_000022766.1 | tagatose-bisphosphate aldolase subunit KbaY | - |
| N0499_RS02930 (602942) | 602942..604096 | - | 1155 | WP_001114869.1 | AgaS family sugar isomerase | - |
| N0499_RS02935 (604447) | 604447..605004 | - | 558 | Protein_574 | amidohydrolase family protein | - |
| N0499_RS02940 (605000) | 605000..605371 | - | 372 | Protein_575 | PTS sugar transporter subunit IIC | - |
| N0499_RS02945 (605382) | 605382..605855 | - | 474 | WP_001336162.1 | PTS N-acetylgalactosamine transporter subunit IIB | - |
| N0499_RS02950 (605878) | 605878..607158 | - | 1281 | WP_000681920.1 | tagatose-bisphosphate aldolase subunit KbaZ | - |
| N0499_RS02955 (607407) | 607407..608216 | + | 810 | WP_000072187.1 | aga operon transcriptional regulator AgaR | - |
| N0499_RS02960 (608271) | 608271..608735 | - | 465 | WP_000347273.1 | type II toxin-antitoxin system ribonuclease toxin YhaV | Toxin Detail |
| N0499_RS02965 (608735) | 608735..609070 | - | 336 | WP_001307405.1 | type II toxin-antitoxin system antitoxin PrlF | Antitoxin Detail |
| N0499_RS02970 (609219) | 609219..610790 | - | 1572 | WP_001273753.1 | galactarate dehydratase | - |
| N0499_RS02975 (611165) | 611165..612499 | + | 1335 | WP_000599636.1 | galactarate/glucarate/glycerate transporter GarP | - |
| N0499_RS02980 (612515) | 612515..613285 | + | 771 | WP_001058209.1 | 2-dehydro-3-deoxyglucarate aldolase | - |
| N0499_RS02985 (613315) | 613315..614205 | + | 891 | WP_001303675.1 | 2-hydroxy-3-oxopropionate reductase | - |
| N0499_RS02990 (614302) | 614302..615447 | + | 1146 | WP_001300387.1 | glycerate 2-kinase | - |
| N0499_RS03000 (616470) | 616470..617657 | - | 1188 | WP_260841029.1 | YhaC family protein | - |
| N0499_RS03005 (617679) | 617679..618218 | - | 540 | WP_000675733.1 | protein YhaB | - |
| N0499_RS03010 (618474) | 618474..618692 | - | 219 | WP_001301311.1 | transcriptional activator TdcR | - |
| N0499_RS03015 (619007) | 619007..619945 | + | 939 | WP_000104211.1 | transcriptional regulator TdcA | - |
| N0499_RS03020 (620044) | 620044..621033 | + | 990 | WP_000548347.1 | bifunctional threonine ammonia-lyase/L-serine ammonia-lyase TdcB | - |
| N0499_RS03025 (621055) | 621055..622386 | + | 1332 | WP_000107723.1 | threonine/serine transporter TdcC | - |
| N0499_RS03030 (622412) | 622412..623620 | + | 1209 | WP_001295545.1 | propionate kinase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|