MGE detailed information
MGE type: Genomic_island MGE length: 23379 bp
Accession: NZ_CP104112 Location: 2216159..2239537 Organism: Escherichia coli strain USDA-ARS-USMARC-51688 Replicon: chromosome
Accession: NZ_CP104112 Location: 2216159..2239537 Organism: Escherichia coli strain USDA-ARS-USMARC-51688 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| N1707_RS10790 (2212974) | 2212974..2214659 | - | 1686 | WP_000628585.1 | ABC transporter ATP-binding protein/permease | - |
| N1707_RS10795 (2214862) | 2214862..2214984 | + | 123 | WP_120795387.1 | protein YneP | - |
| N1707_RS10800 (2214950) | 2214950..2216107 | - | 1158 | WP_001301030.1 | anaerobic sulfatase maturase | - |
| N1707_RS10805 (2216159) | 2216159..2217841 | - | 1683 | WP_001515303.1 | sulfatase | - |
| N1707_RS10810 (2218291) | 2218291..2218988 | + | 698 | WP_103215986.1 | IS1 family transposase IS1G | Transposase |
| N1707_RS10815 (2219019) | 2219019..2219780 | - | 762 | WP_000060493.1 | acid stress response transcriptional regulator YdeO | - |
| N1707_RS10820 (2219855) | 2219855..2220052 | - | 198 | WP_000543385.1 | two-component system connector SafA | - |
| N1707_RS10825 (2220300) | 2220300..2222579 | - | 2280 | WP_000726691.1 | acid resistance putative oxidoreductase YdeP | - |
| N1707_RS10835 (2224249) | 2224249..2225163 | - | 915 | WP_000520676.1 | Type 1 fimbrin D-mannose specific adhesin | VF |
| N1707_RS10840 (2225222) | 2225222..2225725 | - | 504 | WP_000825452.1 | Protein FimG | VF |
| N1707_RS10845 (2225738) | 2225738..2226268 | - | 531 | WP_260254027.1 | Protein FimF | VF |
| N1707_RS10850 (2226282) | 2226282..2228933 | - | 2652 | WP_001515307.1 | Outer membrane usher protein FimD | VF |
| N1707_RS10855 (2228975) | 2228975..2229685 | - | 711 | WP_001195166.1 | Chaperone protein FocC | VF |
| N1707_RS10860 (2230046) | 2230046..2230609 | - | 564 | WP_001296758.1 | Type-1 fimbrial protein, A chain | VF |
| N1707_RS10865 (2231042) | 2231042..2231250 | - | 209 | Protein_2099 | AraC family transcriptional regulator | - |
| N1707_RS10870 (2231562) | 2231562..2232884 | - | 1323 | WP_001125439.1 | type II toxin-antitoxin system serine/threonine protein kinase toxin HipA | Toxin Detail |
| N1707_RS10875 (2232884) | 2232884..2233150 | - | 267 | WP_001301023.1 | type II toxin-antitoxin system antitoxin HipB | Antitoxin Detail |
| N1707_RS10880 (2233373) | 2233373..2238791 | - | 5419 | Protein_2102 | hypothetical protein | VF |
| N1707_RS10890 (2240098) | 2240098..2241690 | - | 1593 | WP_000113144.1 | autoinducer-2 kinase | - |
| N1707_RS10895 (2241769) | 2241769..2242722 | - | 954 | WP_074558485.1 | transcriptional regulator LsrR | - |
| N1707_RS10900 (2243049) | 2243049..2244506 | + | 1458 | WP_247177773.1 | autoinducer 2 ABC transporter ATP-binding protein LsrA | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|