MGE detailed information
MGE type: Prophage MGE length: 23156 bp
Accession: NZ_CP103972 Location: 305620..328775 Organism: Escherichia coli strain DLI.5a Replicon: chromosome
Accession: NZ_CP103972 Location: 305620..328775 Organism: Escherichia coli strain DLI.5a Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NZD79_RS01430 (301800) | 301800..303083 | - | 1284 | Protein_285 | MHS family MFS transporter YdfJ | - |
| NZD79_RS01435 (303280) | 303280..304260 | - | 981 | WP_000019473.1 | IS5-like element ISKpn26 family transposase | - |
| NZD79_RS01440 (304888) | 304888..305001 | + | 114 | WP_120795384.1 | YnaM/YnfT family protein | - |
| NZD79_RS01445 (305070) | 305070..305303 | + | 234 | WP_000836768.1 | cold shock protein YdfK | - |
| NZD79_RS01450 (305620) | 305620..306210 | + | 591 | WP_000078177.1 | Tn3 family transposase TnpR_ISSba14 | Transposase |
| NZD79_RS01455 (306308) | 306308..306883 | - | 576 | WP_000885611.1 | tail fiber assembly protein | - |
| NZD79_RS01460 (306883) | 306883..307857 | - | 975 | WP_077628301.1 | phage tail protein | - |
| NZD79_RS01465 (307869) | 307869..309053 | - | 1185 | Protein_292 | phage terminase large subunit family protein | - |
| NZD79_RS01470 (309028) | 309028..309573 | - | 546 | WP_032304754.1 | DNA-packaging protein | - |
| NZD79_RS01475 (309962) | 309962..310195 | + | 234 | WP_001368374.1 | YlcI/YnfO family protein | - |
| NZD79_RS01480 (310253) | 310253..310663 | + | 411 | WP_000373090.1 | DUF1398 domain-containing protein | - |
| NZD79_RS01485 (310815) | 310815..310988 | - | 174 | WP_001019606.1 | addiction module toxin, GnsA/GnsB family | - |
| NZD79_RS01490 (311160) | 311160..311315 | - | 156 | WP_001309517.1 | protein YnfN | - |
| NZD79_RS01495 (311395) | 311395..311460 | - | 66 | WP_120795388.1 | small protein YnfR | - |
| NZD79_RS01500 (311463) | 311463..311651 | - | 189 | WP_071524604.1 | cold-shock protein | - |
| NZD79_RS01505 (311662) | 311662..311874 | - | 213 | WP_000066495.1 | cold shock protein CspI | - |
| NZD79_RS01510 (312237) | 312237..312734 | - | 498 | WP_001071769.1 | DUF2514 domain-containing protein | - |
| NZD79_RS01515 (312731) | 312731..313264 | - | 534 | WP_001092971.1 | lysozyme | - |
| NZD79_RS01520 (313261) | 313261..313572 | - | 312 | WP_000189916.1 | YdfR family protein | - |
| NZD79_RS01525 (313577) | 313577..313792 | - | 216 | WP_000839590.1 | phage lysis protein EssD | - |
| NZD79_RS01530 (314012) | 314012..314182 | + | 171 | WP_211180497.1 | putative zinc-binding protein YnfU | - |
| NZD79_RS01535 (314546) | 314546..314761 | - | 216 | WP_000066484.1 | cold shock-like protein CspB | - |
| NZD79_RS01540 (315062) | 315062..315274 | + | 213 | WP_000087756.1 | cold shock-like protein CspF | - |
| NZD79_RS01545 (315329) | 315329..315418 | + | 90 | WP_120795389.1 | hypothetical protein | - |
| NZD79_RS01550 (315696) | 315696..316457 | - | 762 | WP_097342229.1 | antitermination protein | - |
| NZD79_RS01555 (316471) | 316471..317520 | - | 1050 | WP_001265199.1 | DUF968 domain-containing protein | - |
| NZD79_RS01560 (317522) | 317522..317800 | - | 279 | WP_012304870.1 | hypothetical protein | - |
| NZD79_RS01565 (317867) | 317867..318118 | - | 252 | WP_000980994.1 | protein Rem | - |
| NZD79_RS01570 (318335) | 318335..318490 | - | 156 | WP_000813254.1 | type I toxin-antitoxin system toxin HokD | - |
| NZD79_RS01575 (318562) | 318562..318849 | - | 288 | WP_000323025.1 | type II toxin-antitoxin system mRNA interferase RelE | Toxin Detail |
| NZD79_RS01580 (318849) | 318849..319088 | - | 240 | WP_000534858.1 | type II toxin-antitoxin system antitoxin RelB | Antitoxin Detail |
| NZD79_RS01585 (319113) | 319113..319418 | + | 306 | WP_001326990.1 | protein YdfV | - |
| NZD79_RS01590 (319621) | 319621..319953 | + | 333 | WP_001301033.1 | FlxA-like family protein | - |
| NZD79_RS01595 (320390) | 320390..320539 | - | 150 | WP_011443592.1 | ISNCY family transposase ISCARN112 | Transposase |
| NZD79_RS01600 (320660) | 320660..321682 | - | 1023 | Protein_319 | ISNCY family transposase ISCARN112 | Transposase |
| NZD79_RS01605 (322472) | 322472..322759 | - | 288 | Protein_320 | hypothetical protein | - |
| NZD79_RS01610 (322989) | 322989..323177 | + | 189 | WP_000854559.1 | cell division inhibition protein DicB | - |
| NZD79_RS01615 (323174) | 323174..323365 | + | 192 | WP_001083297.1 | lysis protein YdfD | - |
| NZD79_RS01620 (323458) | 323458..325929 | + | 2472 | WP_180496116.1 | exonuclease | - |
| NZD79_RS01625 (326002) | 326002..326253 | + | 252 | WP_000005552.1 | excisionase family protein | - |
| NZD79_RS01630 (326288) | 326288..327568 | + | 1281 | WP_000876958.1 | Putative defective protein IntQ ; Integrase | Integrase |
| NZD79_RS01635 (327756) | 327756..328775 | - | 1020 | WP_000836066.1 | Zn-dependent oxidoreductase | - |
| NZD79_RS01640 (328787) | 328787..330001 | - | 1215 | WP_097342215.1 | starvation-sensing protein RspA | - |
| NZD79_RS01645 (330207) | 330207..330533 | - | 327 | WP_000598292.1 | YnfA family protein | - |
| NZD79_RS01650 (330668) | 330668..331009 | + | 342 | WP_000705211.1 | DUF1283 family protein | - |
| NZD79_RS01655 (331044) | 331044..331604 | + | 561 | WP_001138581.1 | spermidine N1-acetyltransferase | - |
| NZD79_RS01660 (331607) | 331607..332317 | - | 711 | WP_001321287.1 | YnfC family lipoprotein | - |
| NZD79_RS01665 (332425) | 332425..332730 | + | 306 | WP_001300836.1 | DUF1161 domain-containing protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|