MGE detailed information
MGE type: Prophage MGE length: 60497 bp
Accession: NZ_CP103762 Location: 2418159..2478655 Organism: Escherichia coli strain 5283 Replicon: chromosome
Accession: NZ_CP103762 Location: 2418159..2478655 Organism: Escherichia coli strain 5283 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| M5T11_RS11730 (2413540) | 2413540..2414250 | + | 711 | WP_001445899.1 | YnfC family lipoprotein | - |
| M5T11_RS11735 (2414253) | 2414253..2414813 | - | 561 | WP_001138584.1 | spermidine N1-acetyltransferase | - |
| M5T11_RS11740 (2414848) | 2414848..2415189 | - | 342 | WP_000705205.1 | DUF1283 family protein | - |
| M5T11_RS11745 (2415324) | 2415324..2415650 | + | 327 | WP_001314753.1 | YnfA family protein | - |
| M5T11_RS11750 (2415856) | 2415856..2417070 | + | 1215 | WP_001295394.1 | starvation-sensing protein RspA | - |
| M5T11_RS11755 (2417082) | 2417082..2418101 | + | 1020 | WP_000836037.1 | Zn-dependent oxidoreductase | - |
| M5T11_RS11760 (2418289) | 2418289..2419569 | - | 1281 | WP_021523105.1 | Putative defective protein IntQ ; Integrase | Integrase |
| M5T11_RS11765 (2419625) | 2419625..2421196 | - | 1572 | WP_029392005.1 | IS66 family transposase ISCro1 | Transposase |
| M5T11_RS11770 (2421216) | 2421216..2421563 | - | 348 | WP_000624622.1 | IS66 family transposase ISCro1 | Transposase |
| M5T11_RS11775 (2421563) | 2421563..2422240 | - | 678 | WP_001339397.1 | IS66 family transposase ISCro1 | Transposase |
| M5T11_RS11780 (2422311) | 2422311..2422562 | - | 252 | WP_000005552.1 | excisionase family protein | - |
| M5T11_RS11785 (2422635) | 2422635..2425106 | - | 2472 | WP_000048363.1 | exonuclease | - |
| M5T11_RS11790 (2425200) | 2425200..2425391 | - | 192 | WP_001083276.1 | lysis protein YdfD | - |
| M5T11_RS11795 (2425388) | 2425388..2425576 | - | 189 | WP_000854559.1 | cell division inhibition protein DicB | - |
| M5T11_RS11800 (2426063) | 2426063..2426638 | - | 576 | WP_000344950.1 | hypothetical protein | - |
| M5T11_RS11805 (2426640) | 2426640..2426795 | - | 156 | WP_000379575.1 | DUF1391 family protein | - |
| M5T11_RS11810 (2426964) | 2426964..2427371 | - | 408 | WP_000381212.1 | helix-turn-helix domain-containing protein | - |
| M5T11_RS11815 (2427452) | 2427452..2427679 | + | 228 | WP_000921596.1 | Cro/CI family transcriptional regulator | - |
| M5T11_RS11820 (2427663) | 2427663..2428184 | + | 522 | WP_000705355.1 | toxin YdaT family protein | - |
| M5T11_RS11825 (2428165) | 2428165..2429130 | + | 966 | WP_000054487.1 | hypothetical protein | - |
| M5T11_RS11830 (2429171) | 2429171..2429569 | + | 399 | WP_001151242.1 | DUF977 family protein | - |
| M5T11_RS11835 (2429772) | 2429772..2430437 | + | 666 | WP_021523102.1 | epoxyqueuosine reductase QueH | - |
| M5T11_RS11840 (2430646) | 2430646..2431260 | + | 615 | WP_001265627.1 | hypothetical protein | - |
| M5T11_RS11845 (2431263) | 2431263..2432285 | + | 1023 | WP_251301666.1 | DUF4868 domain-containing protein | - |
| M5T11_RS11850 (2432790) | 2432790..2433812 | + | 1023 | Protein_2318 | ISNCY family transposase ISCARN112 | Transposase |
| M5T11_RS11855 (2433933) | 2433933..2434082 | + | 150 | WP_011443592.1 | ISNCY family transposase ISCARN112 | Transposase |
| M5T11_RS11860 (2434519) | 2434519..2434851 | - | 333 | WP_001301033.1 | FlxA-like family protein | - |
| M5T11_RS11865 (2435054) | 2435054..2435359 | - | 306 | WP_001326990.1 | protein YdfV | - |
| M5T11_RS11870 (2435384) | 2435384..2435623 | + | 240 | WP_000534858.1 | type II toxin-antitoxin system antitoxin RelB | Antitoxin Detail |
| M5T11_RS11875 (2435623) | 2435623..2435910 | + | 288 | WP_000323025.1 | type II toxin-antitoxin system mRNA interferase RelE | Toxin Detail |
| M5T11_RS11880 (2435982) | 2435982..2436137 | + | 156 | WP_000813254.1 | type I toxin-antitoxin system toxin HokD | - |
| M5T11_RS11885 (2436354) | 2436354..2436605 | + | 252 | WP_000980994.1 | protein Rem | - |
| M5T11_RS11890 (2436672) | 2436672..2436950 | + | 279 | WP_012304870.1 | hypothetical protein | - |
| M5T11_RS11895 (2436952) | 2436952..2438001 | + | 1050 | WP_001265199.1 | DUF968 domain-containing protein | - |
| M5T11_RS11900 (2438015) | 2438015..2438767 | + | 753 | WP_001047135.1 | antitermination protein | - |
| M5T11_RS11905 (2439045) | 2439045..2439134 | - | 90 | WP_120795389.1 | hypothetical protein | - |
| M5T11_RS11910 (2439189) | 2439189..2439401 | - | 213 | WP_000087756.1 | cold shock-like protein CspF | - |
| M5T11_RS11915 (2439702) | 2439702..2439917 | + | 216 | WP_000066484.1 | cold shock-like protein CspB | - |
| M5T11_RS11920 (2440368) | 2440368..2440826 | + | 459 | WP_000526135.1 | IS200-IS605 family transposase IS200C | Transposase |
| M5T11_RS11925 (2440993) | 2440993..2441163 | - | 171 | WP_211180497.1 | putative zinc-binding protein YnfU | - |
| M5T11_RS11930 (2441383) | 2441383..2441598 | + | 216 | WP_000839590.1 | phage lysis protein EssD | - |
| M5T11_RS11935 (2441603) | 2441603..2441914 | + | 312 | WP_000189916.1 | YdfR family protein | - |
| M5T11_RS11940 (2441911) | 2441911..2442444 | + | 534 | WP_001092971.1 | lysozyme | - |
| M5T11_RS11945 (2442441) | 2442441..2442938 | + | 498 | WP_001071769.1 | DUF2514 domain-containing protein | - |
| M5T11_RS11950 (2443301) | 2443301..2443513 | + | 213 | WP_000066495.1 | cold shock protein CspI | - |
| M5T11_RS11955 (2443524) | 2443524..2443712 | + | 189 | WP_071524604.1 | cold-shock protein | - |
| M5T11_RS11960 (2443715) | 2443715..2443780 | + | 66 | WP_120795388.1 | small protein YnfR | - |
| M5T11_RS11965 (2443860) | 2443860..2444015 | + | 156 | WP_001309517.1 | protein YnfN | - |
| M5T11_RS11970 (2444187) | 2444187..2444360 | + | 174 | WP_001019606.1 | addiction module toxin, GnsA/GnsB family | - |
| M5T11_RS11975 (2444512) | 2444512..2444922 | - | 411 | WP_000373090.1 | DUF1398 domain-containing protein | - |
| M5T11_RS11980 (2444980) | 2444980..2445213 | - | 234 | WP_001368374.1 | YlcI/YnfO family protein | - |
| M5T11_RS11985 (2445602) | 2445602..2446147 | + | 546 | WP_000453587.1 | DNA-packaging protein | - |
| M5T11_RS11990 (2446122) | 2446122..2448047 | + | 1926 | WP_001027269.1 | phage terminase large subunit family protein | - |
| M5T11_RS11995 (2448044) | 2448044..2448250 | + | 207 | WP_000198149.1 | gpW family protein | - |
| M5T11_RS12000 (2448247) | 2448247..2449848 | + | 1602 | WP_001356819.1 | phage portal protein | - |
| M5T11_RS12005 (2449829) | 2449829..2451148 | + | 1320 | WP_020233915.1 | S49 family peptidase | - |
| M5T11_RS12010 (2451158) | 2451158..2451490 | + | 333 | WP_001708751.1 | head decoration protein | - |
| M5T11_RS12015 (2451545) | 2451545..2452570 | + | 1026 | WP_000063277.1 | major capsid protein | - |
| M5T11_RS12020 (2452612) | 2452612..2453010 | + | 399 | WP_020233914.1 | DNA-packaging protein FI | - |
| M5T11_RS12025 (2453022) | 2453022..2453375 | + | 354 | WP_000752979.1 | head-tail joining protein | - |
| M5T11_RS12030 (2453387) | 2453387..2453965 | + | 579 | WP_000975070.1 | phage tail protein | - |
| M5T11_RS12035 (2453962) | 2453962..2454357 | + | 396 | WP_000683128.1 | phage minor tail U family protein | - |
| M5T11_RS12040 (2454365) | 2454365..2455105 | + | 741 | WP_001349920.1 | phage tail protein | - |
| M5T11_RS12045 (2455121) | 2455121..2455543 | + | 423 | WP_000479153.1 | phage minor tail protein G | - |
| M5T11_RS12050 (2455525) | 2455525..2455959 | + | 435 | WP_000459457.1 | phage tail assembly protein T | - |
| M5T11_RS12055 (2455952) | 2455952..2458513 | + | 2562 | WP_032153656.1 | phage tail tape measure protein | - |
| M5T11_RS12060 (2458510) | 2458510..2458839 | + | 330 | WP_000847345.1 | phage tail protein | - |
| M5T11_RS12065 (2458839) | 2458839..2459537 | + | 699 | WP_001551186.1 | phage minor tail protein L | - |
| M5T11_RS12070 (2459543) | 2459543..2460286 | + | 744 | WP_032153655.1 | C40 family peptidase | - |
| M5T11_RS12075 (2460223) | 2460223..2460825 | + | 603 | WP_049286672.1 | tail assembly protein | - |
| M5T11_RS12080 (2460886) | 2460886..2464365 | + | 3480 | WP_021523093.1 | host specificity protein J | - |
| M5T11_RS12085 (2464433) | 2464433..2465032 | + | 600 | WP_001542091.1 | Outer membrane protein X | VF |
| M5T11_RS12090 (2465097) | 2465097..2467496 | + | 2400 | WP_032152843.1 | prophage tail fiber N-terminal domain-containing protein | - |
| M5T11_RS12095 (2467493) | 2467493..2467774 | + | 282 | WP_000654154.1 | hypothetical protein | - |
| M5T11_RS12100 (2467784) | 2467784..2468488 | + | 705 | WP_000235967.1 | tail fiber domain-containing protein | - |
| M5T11_RS12105 (2468499) | 2468499..2468792 | + | 294 | WP_000355609.1 | hypothetical protein | - |
| M5T11_RS12110 (2468812) | 2468812..2468921 | + | 110 | Protein_2370 | tail fiber assembly protein | - |
| M5T11_RS12115 (2469019) | 2469019..2469610 | - | 592 | Protein_2371 | Tn3 family transposase TnpR_ISSba14 | Transposase |
| M5T11_RS12120 (2469927) | 2469927..2470160 | - | 234 | WP_106651914.1 | cold shock protein YdfK | - |
| M5T11_RS12125 (2470229) | 2470229..2470342 | - | 114 | WP_120795384.1 | YnaM/YnfT family protein | - |
| M5T11_RS12130 (2470946) | 2470946..2472229 | + | 1284 | Protein_2374 | MHS family MFS transporter YdfJ | - |
| M5T11_RS12135 (2472318) | 2472318..2473778 | + | 1461 | WP_000527786.1 | mannitol dehydrogenase family protein | - |
| M5T11_RS12140 (2473814) | 2473814..2474017 | - | 204 | WP_000214712.1 | putative selenium delivery protein YdfZ | - |
| M5T11_RS12145 (2474195) | 2474195..2474881 | - | 687 | WP_000215553.1 | DNA-binding transcriptional regulator rspR | - |
| M5T11_RS12150 (2474970) | 2474970..2475716 | - | 747 | WP_000636571.1 | NADP-dependent 3-hydroxy acid dehydrogenase YdfG | VF |
| M5T11_RS12155 (2475853) | 2475853..2477898 | + | 2046 | WP_001523328.1 | peptidyl-dipeptidase Dcp | - |
| M5T11_RS12160 (2477943) | 2477943..2478023 | - | 81 | Protein_2380 | hypothetical protein | - |
| M5T11_RS12165 (2478263) | 2478263..2478655 | + | 393 | WP_000671737.1 | YdeI family stress tolerance OB fold protein | - |
| M5T11_RS12170 (2478910) | 2478910..2479800 | + | 891 | WP_001523326.1 | diguanylate cyclase DgcZ | - |
| M5T11_RS12175 (2479915) | 2479915..2480019 | - | 105 | WP_211180496.1 | protein MgtT | - |
| M5T11_RS12180 (2480019) | 2480019..2480114 | - | 96 | WP_000901367.1 | protein MgtS | - |
| M5T11_RS12185 (2480241) | 2480241..2481428 | - | 1188 | WP_001523325.1 | efflux MFS transporter YdeE | - |
| M5T11_RS12190 (2481623) | 2481623..2482522 | + | 900 | WP_000087220.1 | O-acetylserine/cysteine exporter | - |
| M5T11_RS12195 (2482567) | 2482567..2483265 | - | 699 | WP_020233615.1 | GntR family transcriptional regulator | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|