MGE detailed information
MGE type: Prophage MGE length: 56723 bp
Accession: NZ_CP103521 Location: 2393047..2449769 Organism: Escherichia coli strain 2779 - blood draw same patient as MB9267 Replicon: chromosome
Accession: NZ_CP103521 Location: 2393047..2449769 Organism: Escherichia coli strain 2779 - blood draw same patient as MB9267 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| M5S63_RS11555 (2388428) | 2388428..2389138 | + | 711 | WP_001445899.1 | YnfC family lipoprotein | - |
| M5S63_RS11560 (2389141) | 2389141..2389701 | - | 561 | WP_001138584.1 | spermidine N1-acetyltransferase | - |
| M5S63_RS11565 (2389736) | 2389736..2390077 | - | 342 | WP_000705205.1 | DUF1283 family protein | - |
| M5S63_RS11570 (2390212) | 2390212..2390538 | + | 327 | WP_001314753.1 | YnfA family protein | - |
| M5S63_RS11575 (2390744) | 2390744..2391958 | + | 1215 | WP_001295394.1 | starvation-sensing protein RspA | - |
| M5S63_RS11580 (2391970) | 2391970..2392989 | + | 1020 | WP_000836037.1 | Zn-dependent oxidoreductase | - |
| M5S63_RS11585 (2393177) | 2393177..2394457 | - | 1281 | WP_021523105.1 | Putative defective protein IntQ ; Integrase | Integrase |
| M5S63_RS11590 (2394513) | 2394513..2396084 | - | 1572 | WP_029392005.1 | IS66 family transposase ISCro1 | Transposase |
| M5S63_RS11595 (2396104) | 2396104..2396451 | - | 348 | WP_000624622.1 | IS66 family transposase ISCro1 | Transposase |
| M5S63_RS11600 (2396451) | 2396451..2397128 | - | 678 | WP_001339397.1 | IS66 family transposase ISCro1 | Transposase |
| M5S63_RS11605 (2397199) | 2397199..2397450 | - | 252 | WP_000005552.1 | excisionase family protein | - |
| M5S63_RS11610 (2397523) | 2397523..2399994 | - | 2472 | WP_000048363.1 | exonuclease | - |
| M5S63_RS11615 (2400088) | 2400088..2400279 | - | 192 | WP_001083276.1 | lysis protein YdfD | - |
| M5S63_RS11620 (2400276) | 2400276..2400464 | - | 189 | WP_000854559.1 | cell division inhibition protein DicB | - |
| M5S63_RS11625 (2400951) | 2400951..2401526 | - | 576 | WP_000344950.1 | hypothetical protein | - |
| M5S63_RS11630 (2401528) | 2401528..2401683 | - | 156 | WP_000379575.1 | DUF1391 family protein | - |
| M5S63_RS11635 (2401852) | 2401852..2402259 | - | 408 | WP_000381212.1 | helix-turn-helix domain-containing protein | - |
| M5S63_RS11640 (2402340) | 2402340..2402567 | + | 228 | WP_000921596.1 | Cro/CI family transcriptional regulator | - |
| M5S63_RS11645 (2402551) | 2402551..2403072 | + | 522 | WP_000705355.1 | toxin YdaT family protein | - |
| M5S63_RS11650 (2403053) | 2403053..2404018 | + | 966 | WP_000054487.1 | hypothetical protein | - |
| M5S63_RS11655 (2404059) | 2404059..2404457 | + | 399 | WP_001151242.1 | DUF977 family protein | - |
| M5S63_RS11660 (2404660) | 2404660..2405325 | + | 666 | WP_021523102.1 | epoxyqueuosine reductase QueH | - |
| M5S63_RS11665 (2405534) | 2405534..2406148 | + | 615 | WP_001265627.1 | hypothetical protein | - |
| M5S63_RS11670 (2406151) | 2406151..2407173 | + | 1023 | WP_251301666.1 | DUF4868 domain-containing protein | - |
| M5S63_RS11675 (2407678) | 2407678..2408700 | + | 1023 | Protein_2283 | ISNCY family transposase ISCARN112 | Transposase |
| M5S63_RS11680 (2408821) | 2408821..2408970 | + | 150 | WP_011443592.1 | ISNCY family transposase ISCARN112 | Transposase |
| M5S63_RS11685 (2409407) | 2409407..2409739 | - | 333 | WP_001301033.1 | FlxA-like family protein | - |
| M5S63_RS11690 (2409942) | 2409942..2410247 | - | 306 | WP_001326990.1 | protein YdfV | - |
| M5S63_RS11695 (2410272) | 2410272..2410511 | + | 240 | WP_000534858.1 | type II toxin-antitoxin system antitoxin RelB | Antitoxin Detail |
| M5S63_RS11700 (2410511) | 2410511..2410798 | + | 288 | WP_000323025.1 | type II toxin-antitoxin system mRNA interferase RelE | Toxin Detail |
| M5S63_RS11705 (2410870) | 2410870..2411025 | + | 156 | WP_000813254.1 | type I toxin-antitoxin system toxin HokD | - |
| M5S63_RS11710 (2411242) | 2411242..2411493 | + | 252 | WP_000980994.1 | protein Rem | - |
| M5S63_RS11715 (2411560) | 2411560..2411838 | + | 279 | WP_012304870.1 | hypothetical protein | - |
| M5S63_RS11720 (2411840) | 2411840..2412889 | + | 1050 | WP_001265199.1 | DUF968 domain-containing protein | - |
| M5S63_RS11725 (2412903) | 2412903..2413655 | + | 753 | WP_001047135.1 | antitermination protein | - |
| M5S63_RS11730 (2413933) | 2413933..2414022 | - | 90 | WP_120795389.1 | hypothetical protein | - |
| M5S63_RS11735 (2414077) | 2414077..2414289 | - | 213 | WP_000087756.1 | cold shock-like protein CspF | - |
| M5S63_RS11740 (2414590) | 2414590..2414805 | + | 216 | WP_000066484.1 | cold shock-like protein CspB | - |
| M5S63_RS11745 (2415256) | 2415256..2415714 | + | 459 | WP_000526135.1 | IS200-IS605 family transposase IS200C | Transposase |
| M5S63_RS11750 (2415881) | 2415881..2416051 | - | 171 | WP_211180497.1 | putative zinc-binding protein YnfU | - |
| M5S63_RS11755 (2416271) | 2416271..2416486 | + | 216 | WP_000839590.1 | phage lysis protein EssD | - |
| M5S63_RS11760 (2416491) | 2416491..2416802 | + | 312 | WP_000189916.1 | YdfR family protein | - |
| M5S63_RS11765 (2416799) | 2416799..2417332 | + | 534 | WP_001092971.1 | lysozyme | - |
| M5S63_RS11770 (2417329) | 2417329..2417826 | + | 498 | WP_001071769.1 | DUF2514 domain-containing protein | - |
| M5S63_RS11775 (2418189) | 2418189..2418401 | + | 213 | WP_000066495.1 | cold shock protein CspI | - |
| M5S63_RS11780 (2418412) | 2418412..2418600 | + | 189 | WP_071524604.1 | cold-shock protein | - |
| M5S63_RS11785 (2418603) | 2418603..2418668 | + | 66 | WP_120795388.1 | small protein YnfR | - |
| M5S63_RS11790 (2418748) | 2418748..2418903 | + | 156 | WP_001309517.1 | protein YnfN | - |
| M5S63_RS11795 (2419075) | 2419075..2419248 | + | 174 | WP_001019606.1 | addiction module toxin, GnsA/GnsB family | - |
| M5S63_RS11800 (2419400) | 2419400..2419810 | - | 411 | WP_000373090.1 | DUF1398 domain-containing protein | - |
| M5S63_RS11805 (2419868) | 2419868..2420101 | - | 234 | WP_001368374.1 | YlcI/YnfO family protein | - |
| M5S63_RS11810 (2420490) | 2420490..2421035 | + | 546 | WP_000453587.1 | DNA-packaging protein | - |
| M5S63_RS11815 (2421010) | 2421010..2422935 | + | 1926 | WP_001027269.1 | phage terminase large subunit family protein | - |
| M5S63_RS11820 (2422932) | 2422932..2423138 | + | 207 | WP_000198149.1 | gpW family protein | - |
| M5S63_RS11825 (2423135) | 2423135..2424736 | + | 1602 | WP_001356819.1 | phage portal protein | - |
| M5S63_RS11830 (2424717) | 2424717..2426036 | + | 1320 | WP_020233915.1 | S49 family peptidase | - |
| M5S63_RS11835 (2426046) | 2426046..2426378 | + | 333 | WP_001708751.1 | head decoration protein | - |
| M5S63_RS11840 (2426433) | 2426433..2427458 | + | 1026 | WP_000063277.1 | major capsid protein | - |
| M5S63_RS11845 (2427500) | 2427500..2427898 | + | 399 | WP_020233914.1 | DNA-packaging protein FI | - |
| M5S63_RS11850 (2427910) | 2427910..2428263 | + | 354 | WP_000752979.1 | head-tail joining protein | - |
| M5S63_RS11855 (2428275) | 2428275..2428853 | + | 579 | WP_000975070.1 | phage tail protein | - |
| M5S63_RS11860 (2428850) | 2428850..2429245 | + | 396 | WP_000683128.1 | phage minor tail U family protein | - |
| M5S63_RS11865 (2429253) | 2429253..2429993 | + | 741 | WP_001349920.1 | phage tail protein | - |
| M5S63_RS11870 (2430009) | 2430009..2430431 | + | 423 | WP_000479153.1 | phage minor tail protein G | - |
| M5S63_RS11875 (2430413) | 2430413..2430847 | + | 435 | WP_000459457.1 | phage tail assembly protein T | - |
| M5S63_RS11880 (2430840) | 2430840..2433401 | + | 2562 | WP_032153656.1 | phage tail tape measure protein | - |
| M5S63_RS11885 (2433398) | 2433398..2433727 | + | 330 | WP_000847345.1 | phage tail protein | - |
| M5S63_RS11890 (2433727) | 2433727..2434425 | + | 699 | WP_001551186.1 | phage minor tail protein L | - |
| M5S63_RS11895 (2434431) | 2434431..2435174 | + | 744 | WP_032153655.1 | C40 family peptidase | - |
| M5S63_RS11900 (2435111) | 2435111..2435713 | + | 603 | WP_049286672.1 | tail assembly protein | - |
| M5S63_RS11905 (2435774) | 2435774..2439253 | + | 3480 | WP_021523093.1 | host specificity protein J | - |
| M5S63_RS11910 (2439321) | 2439321..2439920 | + | 600 | WP_001542091.1 | Outer membrane protein X | VF |
| M5S63_RS11915 (2439985) | 2439985..2442384 | + | 2400 | WP_032152843.1 | prophage tail fiber N-terminal domain-containing protein | - |
| M5S63_RS11920 (2442381) | 2442381..2442662 | + | 282 | WP_000654154.1 | hypothetical protein | - |
| M5S63_RS11925 (2442672) | 2442672..2443376 | + | 705 | WP_000235967.1 | tail fiber domain-containing protein | - |
| M5S63_RS11930 (2443387) | 2443387..2443680 | + | 294 | WP_000355609.1 | hypothetical protein | - |
| M5S63_RS11935 (2443700) | 2443700..2443809 | + | 110 | Protein_2335 | tail fiber assembly protein | - |
| M5S63_RS11940 (2443907) | 2443907..2444498 | - | 592 | Protein_2336 | Tn3 family transposase TnpR_ISSba14 | Transposase |
| M5S63_RS11945 (2444815) | 2444815..2445048 | - | 234 | WP_106651914.1 | cold shock protein YdfK | - |
| M5S63_RS11950 (2445117) | 2445117..2445230 | - | 114 | WP_120795384.1 | YnaM/YnfT family protein | - |
| M5S63_RS11955 (2445834) | 2445834..2447117 | + | 1284 | Protein_2339 | MHS family MFS transporter YdfJ | - |
| M5S63_RS11960 (2447206) | 2447206..2448666 | + | 1461 | WP_000527786.1 | mannitol dehydrogenase family protein | - |
| M5S63_RS11965 (2448702) | 2448702..2448905 | - | 204 | WP_000214712.1 | putative selenium delivery protein YdfZ | - |
| M5S63_RS11970 (2449083) | 2449083..2449769 | - | 687 | WP_000215553.1 | DNA-binding transcriptional regulator rspR | - |
| M5S63_RS11975 (2449858) | 2449858..2450604 | - | 747 | WP_000636571.1 | bifunctional NADP-dependent 3-hydroxy acid dehydrogenase/3-hydroxypropionate dehydrogenase YdfG | - |
| M5S63_RS11980 (2450741) | 2450741..2452786 | + | 2046 | WP_001523328.1 | peptidyl-dipeptidase Dcp | - |
| M5S63_RS11985 (2452831) | 2452831..2452911 | - | 81 | Protein_2345 | hypothetical protein | - |
| M5S63_RS11990 (2453151) | 2453151..2453543 | + | 393 | WP_000671737.1 | YdeI family stress tolerance OB fold protein | - |
| M5S63_RS11995 (2453798) | 2453798..2454688 | + | 891 | WP_001523326.1 | diguanylate cyclase DgcZ | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|