MGE detailed information
MGE type: Genomic_island MGE length: 25035 bp
Accession: NZ_CP103465 Location: 4244067..4269101 Organism: Escherichia coli O25b:H4-ST131 strain 5392 Replicon: chromosome
Accession: NZ_CP103465 Location: 4244067..4269101 Organism: Escherichia coli O25b:H4-ST131 strain 5392 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| M5T42_RS20660 (4239868) | 4239868..4240206 | + | 339 | WP_000883409.1 | divalent cation tolerance protein CutA | - |
| M5T42_RS20665 (4240182) | 4240182..4241879 | + | 1698 | WP_000068939.1 | protein-disulfide reductase DsbD | - |
| M5T42_RS20670 (4241916) | 4241916..4242491 | + | 576 | WP_001188520.1 | transcriptional regulator | - |
| M5T42_RS20680 (4242871) | 4242871..4243030 | + | 160 | Protein_4050 | integrase | - |
| M5T42_RS20685 (4243097) | 4243097..4243794 | + | 698 | WP_151884388.1 | IS1 family transposase | - |
| M5T42_RS20690 (4244067) | 4244067..4245605 | + | 1539 | WP_001187191.1 | lysine decarboxylation/transport transcriptional activator CadC | - |
| M5T42_RS20695 (4245971) | 4245971..4247305 | + | 1335 | WP_000092909.1 | cadaverine/lysine antiporter | - |
| M5T42_RS20700 (4247385) | 4247385..4249532 | + | 2148 | WP_001296667.1 | lysine decarboxylase CadA | - |
| M5T42_RS20705 (4249591) | 4249591..4251048 | + | 1458 | WP_001610404.1 | dipeptide/tripeptide permease DtpC | - |
| M5T42_RS20710 (4251285) | 4251285..4252802 | + | 1518 | WP_000003806.1 | lysine--tRNA ligase | - |
| M5T42_RS20715 (4252921) | 4252921..4253094 | - | 174 | WP_001173343.1 | type V toxin-antitoxin system toxin GhoT | Toxin Detail |
| M5T42_RS20720 (4253122) | 4253122..4253418 | - | 297 | WP_001312331.1 | type V toxin-antitoxin system endoribonuclease antitoxin GhoS | Antitoxin Detail |
| M5T42_RS20725 (4253646) | 4253646..4253918 | - | 273 | WP_000405643.1 | GNAT family N-acetyltransferase | - |
| M5T42_RS20730 (4254132) | 4254132..4258061 | - | 3930 | WP_001080127.1 | Serine protease EspC | VF |
| M5T42_RS20735 (4259216) | 4259216..4260046 | - | 831 | WP_001088099.1 | AraC family transcriptional regulator | - |
| M5T42_RS20740 (4260944) | 4260944..4264795 | - | 3852 | WP_012896891.1 | Temperature-sensitive hemagglutinin tsh autotransporter | VF |
| M5T42_RS20745 (4265201) | 4265201..4265770 | + | 570 | WP_001035569.1 | hypothetical protein | - |
| M5T42_RS20750 (4265832) | 4265832..4266536 | + | 705 | WP_001227591.1 | putative fimbrial chaperone YraI | VF |
| M5T42_RS20755 (4266564) | 4266564..4269101 | + | 2538 | WP_000866257.1 | Outer membrane usher protein FimD | VF |
| M5T42_RS20760 (4269211) | 4269211..4269483 | - | 273 | WP_000405645.1 | GNAT family N-acetyltransferase | - |
| M5T42_RS20765 (4269495) | 4269495..4269725 | - | 231 | WP_000371709.1 | 4Fe-4S mono-cluster protein YjdI | - |
| M5T42_RS20770 (4269906) | 4269906..4271537 | + | 1632 | WP_001216464.1 | sensor histidine kinase | - |
| M5T42_RS20775 (4271534) | 4271534..4272253 | + | 720 | WP_000611288.1 | two-component system response regulator DcuR | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|