MGE detailed information
MGE type: Genomic_island MGE length: 38852 bp
Accession: NZ_CP103465 Location: 4032715..4071566 Organism: Escherichia coli O25b:H4-ST131 strain 5392 Replicon: chromosome
Accession: NZ_CP103465 Location: 4032715..4071566 Organism: Escherichia coli O25b:H4-ST131 strain 5392 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| M5T42_RS19605 (4028173) | 4028173..4029288 | - | 1116 | WP_001022015.1 | S-methyl-5-thioribose-1-phosphate isomerase | - |
| M5T42_RS19610 (4029298) | 4029298..4030557 | - | 1260 | WP_000132325.1 | S-methyl-5-thioribose kinase | - |
| M5T42_RS19615 (4031357) | 4031357..4032294 | + | 938 | Protein_3842 | glycosyltransferase | - |
| M5T42_RS19620 (4032715) | 4032715..4034790 | + | 2076 | WP_000366620.1 | AAA family ATPase | - |
| M5T42_RS19625 (4034783) | 4034783..4036069 | + | 1287 | WP_000504875.1 | McrC family protein | - |
| M5T42_RS19630 (4036179) | 4036179..4037918 | + | 1740 | WP_000781649.1 | Alw26I/Eco31I/Esp3I family type II restriction endonuclease | - |
| M5T42_RS19635 (4037931) | 4037931..4039121 | - | 1191 | WP_001295727.1 | DNA (cytosine-5-)-methyltransferase | - |
| M5T42_RS19640 (4039114) | 4039114..4040736 | - | 1623 | WP_001295726.1 | Alw26I/Eco31I/Esp3I family type II restriction adenine-specific DNA-methyltransferase | - |
| M5T42_RS19645 (4041527) | 4041527..4041703 | - | 177 | Protein_3848 | IS3 family transposase ISSen1 | Transposase |
| M5T42_RS19650 (4042070) | 4042070..4042219 | - | 150 | Protein_3849 | hypothetical protein | - |
| M5T42_RS19655 (4042325) | 4042325..4042501 | - | 177 | WP_000839286.1 | DUF957 domain-containing protein | - |
| M5T42_RS19660 (4042518) | 4042518..4043006 | - | 489 | WP_000761690.1 | DUF5983 family protein | - |
| M5T42_RS19665 (4043003) | 4043003..4043380 | - | 378 | WP_000854770.1 | TA system toxin CbtA family protein | Toxin Detail |
| M5T42_RS19670 (4043469) | 4043469..4043837 | - | 369 | WP_001280950.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| M5T42_RS19675 (4044000) | 4044000..4044221 | - | 222 | WP_001220314.1 | DUF987 domain-containing protein | - |
| M5T42_RS19680 (4044284) | 4044284..4044760 | - | 477 | WP_001186779.1 | RadC family protein | - |
| M5T42_RS19685 (4044776) | 4044776..4045240 | - | 465 | WP_000855061.1 | antirestriction protein | - |
| M5T42_RS19690 (4045582) | 4045582..4046400 | - | 819 | WP_001234712.1 | DUF932 domain-containing protein | - |
| M5T42_RS19695 (4046518) | 4046518..4046713 | - | 196 | Protein_3858 | DUF905 family protein | - |
| M5T42_RS19700 (4046784) | 4046784..4048685 | - | 1902 | Protein_3859 | Ag43/Cah family autotransporter adhesin | - |
| M5T42_RS19705 (4048879) | 4048879..4050420 | + | 1542 | WP_001298859.1 | IS21 family transposase ISEc12 | Transposase |
| M5T42_RS19710 (4050435) | 4050435..4051181 | + | 747 | WP_001016257.1 | IS21 family transposase ISEc12 | Transposase |
| M5T42_RS19715 (4051266) | 4051266..4052216 | - | 951 | Protein_3862 | autotransporter adhesin family protein | - |
| M5T42_RS19720 (4052588) | 4052588..4053460 | - | 873 | WP_001069743.1 | GTPase family protein | - |
| M5T42_RS19725 (4053559) | 4053559..4054431 | - | 873 | WP_000241617.1 | hypothetical protein | - |
| M5T42_RS19730 (4056003) | 4056003..4056382 | - | 380 | Protein_3865 | IS21 family transposase ISEc62 | Transposase |
| M5T42_RS19735 (4057019) | 4057019..4057621 | - | 603 | WP_001387788.1 | hypothetical protein | - |
| M5T42_RS19740 (4057716) | 4057716..4057922 | - | 207 | WP_000211310.1 | AlpA family transcriptional regulator | - |
| M5T42_RS19745 (4058630) | 4058630..4058842 | + | 213 | WP_000453334.1 | hemolysin expression modulator Hha | - |
| M5T42_RS19750 (4059185) | 4059185..4059382 | - | 198 | WP_001545803.1 | hypothetical protein | - |
| M5T42_RS19755 (4059586) | 4059586..4060155 | + | 570 | WP_000148639.1 | inovirus Gp2 family protein | - |
| M5T42_RS19760 (4060415) | 4060415..4060816 | + | 402 | WP_000270971.1 | putative zinc ribbon protein | - |
| M5T42_RS19765 (4060804) | 4060804..4061238 | + | 435 | WP_001221615.1 | zinc-ribbon domain-containing protein | - |
| M5T42_RS19770 (4061593) | 4061593..4061973 | + | 381 | WP_001171523.1 | IS66 family transposase ISEc8 | Transposase |
| M5T42_RS19775 (4061970) | 4061970..4062317 | + | 348 | WP_000612632.1 | IS66 family transposase ISEc8 | Transposase |
| M5T42_RS19780 (4062357) | 4062357..4063751 | + | 1395 | WP_135097676.1 | IS66 family transposase ISEc8 | Transposase |
| M5T42_RS19785 (4063791) | 4063791..4063868 | + | 78 | Protein_3876 | DUF6404 family protein | - |
| M5T42_RS19790 (4063990) | 4063990..4065348 | - | 1359 | WP_000823249.1 | esterase-like activity of phytase family protein | - |
| M5T42_RS19795 (4065630) | 4065630..4065761 | + | 132 | Protein_3878 | IS3 family transposase | - |
| M5T42_RS19800 (4066285) | 4066285..4066511 | + | 227 | Protein_3879 | acetolactate synthase small subunit | - |
| M5T42_RS19805 (4066513) | 4066513..4067295 | - | 783 | WP_001295538.1 | DeoR family transcriptional regulator | - |
| M5T42_RS19810 (4067601) | 4067601..4068521 | + | 921 | WP_000350265.1 | ribokinase | - |
| M5T42_RS19815 (4068549) | 4068549..4069865 | + | 1317 | WP_000998350.1 | L-fucose:H+ symporter permease | - |
| M5T42_RS19820 (4069877) | 4069877..4070890 | + | 1014 | WP_000107474.1 | aldose 1-epimerase family protein | - |
| M5T42_RS19825 (4071312) | 4071312..4071566 | + | 255 | WP_001327567.1 | IS66 family transposase IS682 | Transposase |
| M5T42_RS19830 (4071813) | 4071813..4073069 | - | 1257 | WP_000345347.1 | PTS ascorbate transporter subunit IIC | - |
| M5T42_RS19835 (4073082) | 4073082..4073369 | - | 288 | WP_135097673.1 | PTS sugar transporter subunit IIB | - |
| M5T42_RS19840 (4073385) | 4073385..4073828 | - | 444 | WP_000916805.1 | PTS sugar transporter subunit IIA | - |
| M5T42_RS19845 (4074099) | 4074099..4075130 | + | 1032 | WP_000416151.1 | LacI family DNA-binding transcriptional regulator | - |
| M5T42_RS19850 (4075258) | 4075258..4075812 | + | 555 | Protein_3889 | transposase | - |
| M5T42_RS19855 (4075831) | 4075831..4076326 | - | 496 | Protein_3890 | IS630 family transposase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|