MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 54531 bp
Accession: NZ_CP103398 Location: 1..54531 Organism: Listeria innocua strain F6215 Replicon: plasmid unnamed
Accession: NZ_CP103398 Location: 1..54531 Organism: Listeria innocua strain F6215 Replicon: plasmid unnamed
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NVV71_RS00005 (NVV71_00005) | 1..1437 | + | 1437 | WP_259000309.1 | toprim domain-containing protein | - |
| NVV71_RS00010 (NVV71_00010) | 1484..1747 | - | 264 | WP_072238247.1 | hypothetical protein | - |
| NVV71_RS00015 (NVV71_00015) | 2086..2358 | + | 273 | WP_031642422.1 | hypothetical protein | - |
| NVV71_RS00020 (NVV71_00020) | 2355..3086 | + | 732 | WP_187989141.1 | hypothetical protein | VF |
| NVV71_RS00025 (NVV71_00025) | 3087..3623 | + | 537 | WP_180680572.1 | hypothetical protein | - |
| NVV71_RS00030 (NVV71_00030) | 3680..4219 | + | 540 | WP_187989140.1 | sugar-phosphate nucleotidyltransferase | - |
| NVV71_RS00035 (NVV71_00035) | 4251..5108 | + | 858 | WP_185481699.1 | DNA (cytosine-5-)-methyltransferase | - |
| NVV71_RS00040 (NVV71_00040) | 5137..5562 | + | 426 | WP_245394540.1 | hypothetical protein | - |
| NVV71_RS00045 (NVV71_00045) | 5667..6638 | + | 972 | WP_061691491.1 | acyltransferase family protein | - |
| NVV71_RS00050 (NVV71_00050) | 6815..7513 | - | 699 | WP_061691490.1 | hypothetical protein | - |
| NVV71_RS00055 (NVV71_00055) | 7596..8291 | - | 696 | WP_187989139.1 | hypothetical protein | - |
| NVV71_RS00060 (NVV71_00060) | 8703..8927 | + | 225 | WP_187997404.1 | hypothetical protein | - |
| NVV71_RS00065 (NVV71_00065) | 9084..9689 | + | 606 | WP_061691488.1 | Tyrosine recombinase XerD | VF |
| NVV71_RS00070 (NVV71_00070) | 9746..10132 | + | 387 | WP_031642493.1 | hypothetical protein | - |
| NVV71_RS00075 (NVV71_00075) | 10319..10603 | + | 285 | WP_031642492.1 | DUF3130 domain-containing protein | - |
| NVV71_RS00080 (NVV71_00080) | 10604..10972 | + | 369 | WP_176832740.1 | ribonuclease P | - |
| NVV71_RS00085 (NVV71_00085) | 10969..12051 | + | 1083 | Protein_16 | LXG domain-containing protein | - |
| NVV71_RS00090 (NVV71_00090) | 12157..12426 | + | 270 | WP_259000558.1 | HNH/ENDO VII family nuclease | - |
| NVV71_RS00095 (NVV71_00095) | 12440..12913 | + | 474 | WP_061691486.1 | SMI1/KNR4 family protein | - |
| NVV71_RS00100 (NVV71_00100) | 13089..13349 | + | 261 | WP_070261904.1 | YolD-like family protein | - |
| NVV71_RS00105 (NVV71_00105) | 13355..13702 | + | 348 | WP_061691485.1 | hypothetical protein | - |
| NVV71_RS00110 (NVV71_00110) | 13690..14970 | + | 1281 | WP_187989136.1 | Y-family DNA polymerase | - |
| NVV71_RS00115 (NVV71_00115) | 15091..15426 | - | 336 | WP_031642473.1 | hypothetical protein | - |
| NVV71_RS00120 (NVV71_00120) | 15441..16271 | - | 831 | WP_031642471.1 | ParA family protein | - |
| NVV71_RS00125 (NVV71_00125) | 16958..18625 | + | 1668 | WP_049961607.1 | primase C-terminal domain-containing protein | - |
| NVV71_RS00130 (NVV71_00130) | 18852..19697 | - | 846 | WP_031670162.1 | HTH-type transcriptional activator RhaR | VF |
| NVV71_RS00135 (NVV71_00135) | 19811..20386 | - | 576 | WP_031670164.1 | Tn3 family transposase TnpR_ISPa40 | Transposase |
| NVV71_RS00140 (NVV71_00140) | 20534..23500 | + | 2967 | WP_096837656.1 | Tn3 family transposase Tn4430 | Transposase |
| NVV71_RS00145 (NVV71_00145) | 23623..24501 | - | 879 | WP_031642468.1 | Rgg/GadR/MutR family transcriptional regulator | - |
| NVV71_RS00150 (NVV71_00150) | 24889..25107 | + | 219 | WP_031642467.1 | hypothetical protein | - |
| NVV71_RS00155 (NVV71_00155) | 25143..26060 | - | 918 | WP_187989155.1 | helix-turn-helix transcriptional regulator | - |
| NVV71_RS00160 (NVV71_00160) | 26787..27488 | + | 702 | WP_031642465.1 | hypothetical protein | - |
| NVV71_RS00165 (NVV71_00165) | 28143..28379 | + | 237 | WP_187989154.1 | hypothetical protein | - |
| NVV71_RS00170 (NVV71_00170) | 28472..30766 | + | 2295 | WP_187989153.1 | isopeptide-forming domain-containing fimbrial protein | - |
| NVV71_RS00175 (NVV71_00175) | 30874..31098 | + | 225 | WP_187989152.1 | hypothetical protein | - |
| NVV71_RS00180 (NVV71_00180) | 31253..32896 | + | 1644 | WP_259000485.1 | GW dipeptide domain-containing protein | - |
| NVV71_RS00185 (NVV71_00185) | 32949..33263 | + | 315 | WP_068995972.1 | hypothetical protein | - |
| NVV71_RS00190 (NVV71_00190) | 33288..33974 | + | 687 | WP_187989150.1 | hypothetical protein | VF |
| NVV71_RS00195 (NVV71_00195) | 34087..34323 | + | 237 | WP_031642456.1 | hypothetical protein | - |
| NVV71_RS00200 (NVV71_00200) | 34341..34625 | + | 285 | WP_068995969.1 | TrbC/VirB2 family protein | - |
| NVV71_RS00205 (NVV71_00205) | 34676..36820 | + | 2145 | WP_068995968.1 | hypothetical protein | - |
| NVV71_RS00210 (NVV71_00210) | 36863..37414 | + | 552 | WP_031642452.1 | hypothetical protein | - |
| NVV71_RS00215 (NVV71_00215) | 37418..39742 | + | 2325 | WP_187989149.1 | type IV secretory system conjugative DNA transfer family protein | - |
| NVV71_RS00220 (NVV71_00220) | 39825..40046 | + | 222 | WP_068995951.1 | DUF6290 family protein | Antitoxin Detail |
| NVV71_RS00225 (NVV71_00225) | 40043..40318 | + | 276 | WP_068995950.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| NVV71_RS00230 (NVV71_00230) | 40553..42457 | + | 1905 | WP_187989148.1 | hypothetical protein | - |
| NVV71_RS00235 (NVV71_00235) | 42473..42745 | + | 273 | WP_068995947.1 | DUF5592 family protein | - |
| NVV71_RS00240 (NVV71_00240) | 42747..43286 | + | 540 | WP_068995946.1 | hypothetical protein | - |
| NVV71_RS00245 (NVV71_00245) | 43283..45229 | + | 1947 | WP_070261944.1 | hypothetical protein | - |
| NVV71_RS00250 (NVV71_00250) | 45230..46306 | + | 1077 | WP_077956015.1 | M23 family metallopeptidase | - |
| NVV71_RS00255 (NVV71_00255) | 46325..46927 | + | 603 | WP_070261942.1 | hypothetical protein | - |
| NVV71_RS00260 (NVV71_00260) | 46927..47712 | + | 786 | WP_187989147.1 | hypothetical protein | - |
| NVV71_RS00265 (NVV71_00265) | 47905..48210 | + | 306 | WP_031642434.1 | hypothetical protein | - |
| NVV71_RS00270 (NVV71_00270) | 48179..48586 | + | 408 | WP_031642433.1 | hypothetical protein | - |
| NVV71_RS00275 (NVV71_00275) | 48604..49950 | + | 1347 | WP_187989146.1 | hypothetical protein | Relaxase |
| NVV71_RS00280 (NVV71_00280) | 50446..50811 | + | 366 | WP_031642430.1 | hypothetical protein | - |
| NVV71_RS00285 (NVV71_00285) | 50833..52974 | + | 2142 | WP_187989145.1 | type IA DNA topoisomerase | - |
| NVV71_RS00290 (NVV71_00290) | 53026..53226 | + | 201 | WP_187989144.1 | hypothetical protein | - |
| NVV71_RS00295 (NVV71_00295) | 53243..54325 | + | 1083 | WP_187989143.1 | ArdC family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|