MGE detailed information
MGE type: Prophage MGE length: 52001 bp
Accession: NZ_CP101305 Location: 3188199..3240199 Organism: Escherichia coli strain 2002-3211 Replicon: chromosome
Accession: NZ_CP101305 Location: 3188199..3240199 Organism: Escherichia coli strain 2002-3211 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NMK57_RS16125 (3183297) | 3183297..3185090 | - | 1794 | WP_000107384.1 | Ni/Fe-hydrogenase large subunit | - |
| NMK57_RS16130 (3185087) | 3185087..3186205 | - | 1119 | WP_001370123.1 | hydrogenase 1 small subunit | - |
| NMK57_RS16140 (3187321) | 3187321..3188073 | + | 753 | WP_012817749.1 | EspF repeat-containing protein | - |
| NMK57_RS16145 (3188199) | 3188199..3188468 | - | 270 | WP_032212659.1 | phage tail fiber C-terminal domain-containing protein | - |
| NMK57_RS16150 (3188470) | 3188470..3189783 | - | 1314 | WP_000268934.1 | ISNCY family transposase KIS | Transposase |
| NMK57_RS16155 (3189848) | 3189848..3190423 | - | 576 | WP_024174257.1 | Attachment invasion locus protein | VF |
| NMK57_RS16160 (3190492) | 3190492..3193968 | - | 3477 | WP_254856967.1 | host specificity protein J | - |
| NMK57_RS16165 (3194217) | 3194217..3194798 | - | 582 | WP_001090037.1 | tail assembly protein | - |
| NMK57_RS16170 (3194795) | 3194795..3195538 | - | 744 | WP_001356665.1 | C40 family peptidase | - |
| NMK57_RS16175 (3195549) | 3195549..3196247 | - | 699 | WP_032212666.1 | phage minor tail protein L | - |
| NMK57_RS16180 (3196247) | 3196247..3196588 | - | 342 | WP_000807954.1 | phage tail protein | - |
| NMK57_RS16185 (3196581) | 3196581..3199823 | - | 3243 | WP_000212947.1 | phage tail tape measure protein | - |
| NMK57_RS16190 (3199875) | 3199875..3200084 | - | 210 | WP_001453698.1 | DUF4035 domain-containing protein | - |
| NMK57_RS16195 (3200180) | 3200180..3200554 | - | 375 | WP_000710949.1 | phage tail assembly chaperone | - |
| NMK57_RS16200 (3200569) | 3200569..3201285 | - | 717 | WP_001275482.1 | major tail subunit | - |
| NMK57_RS16205 (3201351) | 3201351..3201695 | - | 345 | WP_000133388.1 | DUF3168 domain-containing protein | - |
| NMK57_RS16210 (3201692) | 3201692..3202138 | - | 447 | WP_000573374.1 | HK97 gp10 family phage protein | - |
| NMK57_RS16215 (3202135) | 3202135..3202485 | - | 351 | WP_001007905.1 | phage head closure protein | - |
| NMK57_RS16220 (3202496) | 3202496..3202822 | - | 327 | WP_000125984.1 | head-tail connector protein | - |
| NMK57_RS16225 (3202819) | 3202819..3203514 | - | 696 | Protein_3186 | phage portal protein | - |
| NMK57_RS16235 (3204777) | 3204777..3205111 | - | 335 | Protein_3188 | IS3 family transposase ISSfl10 | Transposase |
| NMK57_RS16240 (3205176) | 3205176..3205292 | + | 117 | Protein_3189 | YlcI/YnfO family protein | - |
| NMK57_RS16245 (3205422) | 3205422..3205562 | - | 141 | WP_000347013.1 | hypothetical protein | - |
| NMK57_RS16250 (3205912) | 3205912..3207068 | + | 1157 | WP_085948186.1 | IS3 family transposase ISSd1 | Transposase |
| NMK57_RS16255 (3207186) | 3207186..3207410 | - | 225 | WP_000735655.1 | hypothetical protein | - |
| NMK57_RS16260 (3207475) | 3207475..3207681 | - | 207 | WP_001208682.1 | Rz1 family lipoprotein | - |
| NMK57_RS16265 (3207904) | 3207904..3208035 | - | 132 | WP_001280927.1 | hypothetical protein | - |
| NMK57_RS16270 (3208328) | 3208328..3208861 | - | 534 | WP_001003112.1 | lysozyme | - |
| NMK57_RS16275 (3209021) | 3209021..3209293 | + | 273 | WP_000138558.1 | hypothetical protein | - |
| NMK57_RS16280 (3209706) | 3209706..3210919 | + | 1214 | WP_101329727.1 | IS3 family transposase IS1203 | Transposase |
| NMK57_RS16285 (3210922) | 3210922..3211170 | - | 249 | WP_254856973.1 | class II holin family protein | - |
| NMK57_RS16290 (3211608) | 3211608..3213458 | - | 1851 | WP_032212668.1 | SASA family carbohydrate esterase | - |
| NMK57_RS16295 (3213901) | 3213901..3214032 | - | 132 | WP_001344632.1 | DUF3927 family protein | - |
| NMK57_RS16300 (3214029) | 3214029..3214460 | - | 432 | Protein_3201 | tellurite resistance TerB family protein | - |
| NMK57_RS16320 (3214920) | 3214920..3215978 | - | 1059 | WP_000935558.1 | site-specific DNA-methyltransferase | - |
| NMK57_RS16325 (3216129) | 3216129..3216326 | - | 198 | WP_000917750.1 | hypothetical protein | - |
| NMK57_RS16330 (3216552) | 3216552..3217373 | - | 822 | WP_000762899.1 | antitermination protein | - |
| NMK57_RS16335 (3217370) | 3217370..3217744 | - | 375 | WP_001121083.1 | RusA family crossover junction endodeoxyribonuclease | - |
| NMK57_RS16340 (3217757) | 3217757..3218806 | - | 1050 | WP_001265272.1 | DUF968 domain-containing protein | - |
| NMK57_RS16345 (3218808) | 3218808..3219080 | - | 273 | WP_000046991.1 | hypothetical protein | - |
| NMK57_RS16350 (3219201) | 3219201..3219548 | - | 348 | WP_000756560.1 | NirD/YgiW/YdeI family stress tolerance protein | - |
| NMK57_RS16355 (3219666) | 3219666..3219821 | - | 156 | WP_000813258.1 | Hok/Gef family protein | - |
| NMK57_RS16360 (3220067) | 3220067..3220171 | - | 105 | WP_001278454.1 | hypothetical protein | - |
| NMK57_RS16365 (3220287) | 3220287..3220475 | - | 189 | WP_064769369.1 | DUF551 domain-containing protein | - |
| NMK57_RS16370 (3220725) | 3220725..3220820 | - | 96 | Protein_3212 | hypothetical protein | - |
| NMK57_RS16375 (3221031) | 3221031..3221156 | - | 126 | Protein_3213 | hypothetical protein | - |
| NMK57_RS16380 (3221167) | 3221167..3221313 | - | 147 | Protein_3214 | hypothetical protein | - |
| NMK57_RS16385 (3221391) | 3221391..3222065 | + | 675 | WP_001341423.1 | IS66 family transposase ISSfl3 | Transposase |
| NMK57_RS16390 (3222062) | 3222062..3222409 | + | 348 | WP_000631725.1 | IS66 family transposase ISSfl3 | Transposase |
| NMK57_RS16395 (3222429) | 3222429..3223985 | + | 1557 | WP_001066422.1 | IS66 family transposase ISSfl3 | Transposase |
| NMK57_RS16400 (3224013) | 3224013..3224147 | - | 135 | Protein_3218 | hypothetical protein | - |
| NMK57_RS16405 (3224149) | 3224149..3224367 | - | 219 | WP_000209148.1 | DUF4014 family protein | - |
| NMK57_RS16410 (3224400) | 3224400..3224612 | - | 213 | WP_000935423.1 | hypothetical protein | - |
| NMK57_RS16415 (3224718) | 3224718..3225140 | - | 423 | WP_001151187.1 | DUF977 family protein | - |
| NMK57_RS16420 (3225181) | 3225181..3226143 | - | 963 | WP_000095671.1 | helix-turn-helix domain-containing protein | - |
| NMK57_RS16425 (3226166) | 3226166..3226591 | - | 426 | WP_000693944.1 | toxin YdaT family protein | - |
| NMK57_RS16430 (3226588) | 3226588..3226890 | - | 303 | WP_000172738.1 | transcriptional regulator | - |
| NMK57_RS16435 (3226988) | 3226988..3227359 | + | 372 | WP_001169687.1 | hypothetical protein | - |
| NMK57_RS16440 (3227380) | 3227380..3227571 | + | 192 | WP_001302048.1 | hypothetical protein | Antitoxin Detail |
| NMK57_RS16445 (3227573) | 3227573..3227851 | + | 279 | WP_001303511.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| NMK57_RS16450 (3228204) | 3228204..3228503 | + | 300 | WP_001240334.1 | hypothetical protein | - |
| NMK57_RS16455 (3228469) | 3228469..3228642 | + | 174 | Protein_3229 | hypothetical protein | - |
| NMK57_RS16460 (3229216) | 3229216..3229437 | + | 222 | WP_000560212.1 | cell division protein FtsZ | - |
| NMK57_RS16465 (3229561) | 3229561..3232032 | + | 2472 | WP_000048560.1 | exonuclease | - |
| NMK57_RS16470 (3232094) | 3232094..3232363 | + | 270 | WP_000003742.1 | excisionase | - |
| NMK57_RS16475 (3232332) | 3232332..3233450 | + | 1119 | WP_000074974.1 | hypothetical protein ; Integrase | Integrase |
| NMK57_RS16480 (3233527) | 3233527..3233994 | - | 468 | WP_001113310.1 | DUF2335 domain-containing protein | - |
| NMK57_RS16485 (3233972) | 3233972..3234175 | - | 204 | WP_000824186.1 | hypothetical protein | - |
| NMK57_RS16490 (3234484) | 3234484..3235278 | + | 795 | WP_000580316.1 | spermidine/putrescine ABC transporter permease PotC | - |
| NMK57_RS16495 (3235275) | 3235275..3236321 | + | 1047 | WP_000759317.1 | spermidine/putrescine ABC transporter substrate-binding protein PotD | - |
| NMK57_RS16500 (3236477) | 3236477..3237298 | - | 822 | WP_000952736.1 | NAD-dependent protein deacylase | - |
| NMK57_RS16505 (3237314) | 3237314..3238225 | - | 912 | WP_000291280.1 | N-acetylglucosamine kinase | - |
| NMK57_RS16510 (3238254) | 3238254..3239498 | - | 1245 | WP_001251388.1 | lipoprotein-releasing ABC transporter permease subunit LolE | - |
| NMK57_RS16515 (3239498) | 3239498..3240199 | - | 702 | WP_001033695.1 | Lipoprotein-releasing system ATP-binding protein LolD | VF |
| NMK57_RS16520 (3240192) | 3240192..3241391 | - | 1200 | WP_000284714.1 | lipoprotein-releasing ABC transporter permease subunit LolC | - |
| NMK57_RS16525 (3241653) | 3241653..3242726 | + | 1074 | WP_000810250.1 | acyltransferase family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|