MGE detailed information
MGE type: Genomic_island MGE length: 9954 bp
Accession: NZ_CP100702 Location: 843909..853862 Organism: Salmonella enterica subsp. enterica serovar Thompson strain R18.0872 Replicon: chromosome
Accession: NZ_CP100702 Location: 843909..853862 Organism: Salmonella enterica subsp. enterica serovar Thompson strain R18.0872 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NL734_RS04040 (839355) | 839355..840453 | + | 1099 | WP_010989230.1 | peptide chain release factor 2 | - |
| NL734_RS04045 (840463) | 840463..841980 | + | 1518 | WP_000003339.1 | lysine--tRNA ligase | - |
| NL734_RS04050 (842056) | 842056..842601 | - | 546 | WP_000133986.1 | isopentenyl-diphosphate Delta-isomerase | - |
| NL734_RS04055 (842866) | 842866..843624 | + | 759 | WP_000244328.1 | amidase activator ActS | - |
| NL734_RS04065 (843909) | 843909..844715 | - | 807 | WP_077907190.1 | DUF1460 domain-containing protein | - |
| NL734_RS04070 (844990) | 844990..845241 | - | 252 | WP_001748683.1 | hypothetical protein | - |
| NL734_RS04075 (845450) | 845450..845677 | + | 228 | WP_000557545.1 | toxin-antitoxin system antitoxin VapB | Antitoxin Detail |
| NL734_RS04080 (845677) | 845677..846075 | + | 399 | WP_001748684.1 | tRNA(fMet)-specific endonuclease VapC | Toxin Detail |
| NL734_RS04085 (846881) | 846881..847417 | + | 537 | WP_107919757.1 | Nucleoside triphosphate pyrophosphohydrolase | VF |
| NL734_RS04090 (847464) | 847464..848096 | + | 633 | WP_000835265.1 | YfdX family protein | - |
| NL734_RS04095 (848815) | 848815..849402 | + | 588 | WP_001244643.1 | Enolase | VF |
| NL734_RS04100 (849522) | 849522..852011 | + | 2490 | WP_000705488.1 | hypothetical protein | VF |
| NL734_RS04105 (852052) | 852052..852795 | + | 744 | WP_000798500.1 | hypothetical protein | VF |
| NL734_RS04110 (852792) | 852792..853862 | + | 1071 | WP_017465476.1 | adhesion protein | - |
| NL734_RS04115 (853969) | 853969..854475 | + | 507 | WP_000093329.1 | CaiF/GrlA family transcriptional regulator | - |
| NL734_RS04120 (854462) | 854462..855220 | + | 759 | WP_000134795.1 | transcriptional regulator | - |
| NL734_RS04125 (855425) | 855425..856279 | - | 855 | WP_000503685.1 | nickel/cobalt efflux protein RcnA | - |
| NL734_RS04130 (856402) | 856402..856674 | + | 273 | WP_000019953.1 | Ni(II)/Co(II)-binding transcriptional repressor RcnR | - |
| NL734_RS04135 (856705) | 856705..857934 | - | 1230 | WP_017465479.1 | amino acid permease | - |
| NL734_RS04140 (858076) | 858076..858531 | - | 456 | WP_017465480.1 | multidrug/biocide efflux PACE transporter | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|