MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 132943 bp
Accession: NZ_CP100229 Location: 1..132943 Organism: Burkholderia glumae strain SEW1RS Replicon: plasmid pse1rs1p
Accession: NZ_CP100229 Location: 1..132943 Organism: Burkholderia glumae strain SEW1RS Replicon: plasmid pse1rs1p
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NIX03_RS30480 | 101..772 | + | 672 | WP_012734035.1 | AAA family ATPase | - |
| NIX03_RS30485 | 772..1737 | + | 966 | WP_012734036.1 | ParB/RepB/Spo0J family partition protein | - |
| NIX03_RS30490 | 2492..3349 | + | 858 | WP_012734037.1 | plasmid replication initiator TrfA | - |
| NIX03_RS30495 | 3613..4869 | + | 1257 | Protein_3 | IS21 family transposase ISAlisp1 | Transposase |
| NIX03_RS30500 | 4937..5803 | - | 867 | WP_012732871.1 | IS21 family transposase ISBcen28 | Transposase |
| NIX03_RS30505 | 5800..7056 | - | 1257 | WP_012734039.1 | IS21 family transposase ISBcen28 | Transposase |
| NIX03_RS30510 | 7182..7436 | + | 255 | Protein_6 | IS21 family transposase ISCsp4 | Transposase |
| NIX03_RS30515 | 7429..8184 | + | 756 | WP_012734041.1 | IS21 family transposase ISPa65 | Transposase |
| NIX03_RS30520 | 8215..9801 | - | 1587 | WP_012732733.1 | IS66 family transposase ISBmu30 | Transposase |
| NIX03_RS30525 | 9901..10254 | - | 354 | WP_012732734.1 | IS66 family transposase ISBmu30 | Transposase |
| NIX03_RS30530 | 10254..10709 | - | 456 | WP_012732735.1 | IS66 family transposase ISRtr5 | Transposase |
| NIX03_RS30535 | 11166..11468 | - | 303 | WP_257739416.1 | hypothetical protein | - |
| NIX03_RS30540 | 11541..11969 | - | 429 | WP_012734042.1 | type II toxin-antitoxin system VapC family toxin | - |
| NIX03_RS30545 | 11969..12226 | - | 258 | WP_012734043.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | - |
| NIX03_RS30550 | 12319..14589 | - | 2271 | WP_257739417.1 | IS91 family transposase ISAzo26 | Transposase |
| NIX03_RS30555 | 14660..15481 | - | 822 | WP_043308413.1 | hypothetical protein | - |
| NIX03_RS30560 | 15675..16208 | - | 534 | WP_148271068.1 | hypothetical protein | - |
| NIX03_RS30565 | 16531..17340 | - | 810 | Protein_17 | IS110 family transposase IS884 | Transposase |
| NIX03_RS30570 | 17528..18175 | - | 648 | Protein_18 | IS6 family transposase ISDge13 | Transposase |
| NIX03_RS30580 | 19831..23265 | + | 3435 | WP_012734047.1 | S-layer family protein | - |
| NIX03_RS30585 | 23738..25876 | + | 2139 | WP_012734048.1 | Toxin RTX-I translocation ATP-binding protein | VF |
| NIX03_RS30590 | 25881..27299 | + | 1419 | WP_012734049.1 | Hemolysin secretion protein D, chromosomal | VF |
| NIX03_RS30595 | 27289..28740 | + | 1452 | WP_012734050.1 | Outer membrane protein TolC | VF |
| NIX03_RS30600 | 28918..29133 | + | 216 | WP_237711043.1 | IS66 family transposase ISRm2 | Transposase |
| NIX03_RS30605 | 29123..30241 | - | 1119 | Protein_25 | IS66 family transposase ISAeh1 | Transposase |
| NIX03_RS30610 | 30268..31824 | - | 1557 | WP_012732752.1 | IS66 family transposase ISAeh1 | Transposase |
| NIX03_RS30615 | 31856..32206 | - | 351 | WP_012732753.1 | IS66 family transposase ISBmu30 | Transposase |
| NIX03_RS30620 | 32182..32658 | - | 477 | WP_012734051.1 | IS66 family transposase ISRtr5 | Transposase |
| NIX03_RS33145 | 32800..33660 | + | 861 | WP_276581702.1 | hypothetical protein | VF |
| NIX03_RS30630 | 33788..34514 | - | 727 | Protein_30 | IS6 family transposase | - |
| NIX03_RS30635 | 34530..34928 | - | 399 | WP_012734052.1 | nuclear transport factor 2 family protein | - |
| NIX03_RS30640 | 35010..35951 | + | 942 | WP_012734053.1 | Glycine cleavage system transcriptional activator | VF |
| NIX03_RS30645 | 35954..36166 | + | 213 | WP_017424862.1 | hypothetical protein | - |
| NIX03_RS30650 | 36933..38171 | - | 1239 | WP_045678675.1 | FAD-dependent monooxygenase | - |
| NIX03_RS30655 | 38899..39750 | - | 852 | WP_012734056.1 | hypothetical protein | VF |
| NIX03_RS30660 | 39977..40396 | + | 420 | WP_012734057.1 | hypothetical protein | - |
| NIX03_RS30665 | 40704..41908 | + | 1205 | WP_085962364.1 | IS3 family transposase ISBugl1 | Transposase |
| NIX03_RS30670 | 42010..43247 | + | 1238 | WP_085962446.1 | IS3 family transposase IS1417 | Transposase |
| NIX03_RS30675 | 43279..43566 | + | 288 | Protein_39 | IS21 family transposase ISBmu3 | Transposase |
| NIX03_RS30680 | 43646..44692 | - | 1047 | WP_012734061.1 | IS481 family transposase IS1419 | Transposase |
| NIX03_RS30685 | 45405..45599 | - | 195 | WP_124837731.1 | hypothetical protein | - |
| NIX03_RS30690 | 45669..45971 | - | 303 | WP_127913981.1 | hypothetical protein | - |
| NIX03_RS30695 | 46035..46277 | - | 243 | WP_012734062.1 | hypothetical protein | - |
| NIX03_RS30700 | 46290..46553 | - | 264 | WP_017433216.1 | hypothetical protein | - |
| NIX03_RS30705 | 46565..46885 | - | 321 | WP_012734063.1 | type II toxin-antitoxin system PemK/MazF family toxin | - |
| NIX03_RS30710 | 46879..47127 | - | 249 | WP_012734064.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | - |
| NIX03_RS30715 | 47239..47910 | - | 672 | WP_012734065.1 | site-specific integrase | - |
| NIX03_RS30720 | 48035..48325 | - | 291 | WP_017425259.1 | Tn3 family transposase TnpR_ISThsp9 | Transposase |
| NIX03_RS30725 | 48365..49918 | - | 1554 | WP_102952664.1 | IS91 family transposase ISAzo26 | Transposase |
| NIX03_RS30730 | 50915..51598 | + | 684 | WP_012734068.1 | Adenylyl-sulfate kinase | VF |
| NIX03_RS30735 | 51671..52486 | + | 816 | WP_035976812.1 | sulfotransferase | - |
| NIX03_RS30740 | 52602..52868 | - | 267 | Protein_52 | IS1182 family transposase ISThsp18 | Transposase |
| NIX03_RS30745 | 53018..54313 | + | 1296 | WP_012734070.1 | aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme | - |
| NIX03_RS30750 | 54672..55691 | - | 1020 | WP_012734071.1 | IS110 family transposase IS884 | Transposase |
| NIX03_RS30755 | 55894..56711 | + | 818 | WP_085962447.1 | IS5 family transposase ISBugl2 | Transposase |
| NIX03_RS30760 | 57011..57607 | + | 597 | WP_017432949.1 | HD-GYP domain-containing protein | - |
| NIX03_RS30765 | 57903..59001 | + | 1099 | Protein_57 | tyrosine-type recombinase/integrase | - |
| NIX03_RS30770 | 59125..60708 | - | 1584 | WP_012732724.1 | hypothetical protein | VF |
| NIX03_RS30775 | 61191..61535 | + | 345 | WP_017432531.1 | hypothetical protein | - |
| NIX03_RS30780 | 61575..63272 | + | 1698 | WP_012732723.1 | hypothetical protein | VF |
| NIX03_RS30785 | 63449..65173 | + | 1725 | WP_012734074.1 | hypothetical protein | VF |
| NIX03_RS30790 | 65392..65880 | + | 489 | WP_080569430.1 | hypothetical protein | - |
| NIX03_RS30795 | 66207..66588 | - | 382 | Protein_63 | transposase | - |
| NIX03_RS30800 | 66719..67536 | + | 818 | WP_085962346.1 | IS5 family transposase ISBugl2 | Transposase |
| NIX03_RS33150 | 68354..69913 | + | 1560 | WP_012734076.1 | Aerotaxis receptor | VF |
| NIX03_RS30815 | 70013..70712 | + | 700 | Protein_66 | IS3 family transposase | - |
| NIX03_RS30820 | 70802..71278 | + | 477 | WP_039203908.1 | IS66 family transposase ISRtr5 | Transposase |
| NIX03_RS30825 | 71254..71604 | + | 351 | WP_012732753.1 | IS66 family transposase ISBmu30 | Transposase |
| NIX03_RS30830 | 71636..73192 | + | 1557 | WP_012732752.1 | IS66 family transposase ISAeh1 | Transposase |
| NIX03_RS30835 | 73219..73551 | + | 333 | Protein_70 | IS3 family transposase IS1416 | Transposase |
| NIX03_RS30840 | 73583..76117 | - | 2535 | WP_158335140.1 | Sensor histidine kinase RcsC | VF |
| NIX03_RS30845 | 76267..77046 | - | 780 | WP_012734079.1 | Sensor histidine kinase RcsC | VF |
| NIX03_RS30850 | 77266..78003 | - | 738 | WP_017423070.1 | Regulator of RpoS | VF |
| NIX03_RS30855 | 78218..79021 | + | 804 | Protein_74 | IS5 family transposase | - |
| NIX03_RS30865 | 80563..82050 | + | 1488 | WP_124837819.1 | hypothetical protein | - |
| NIX03_RS30870 | 82146..83993 | + | 1848 | WP_012734082.1 | clostripain-related cysteine peptidase | - |
| NIX03_RS30875 | 84172..84977 | + | 806 | WP_085962449.1 | IS5 family transposase IS1421 | Transposase |
| NIX03_RS30880 | 84952..85131 | - | 180 | Protein_79 | hypothetical protein | - |
| NIX03_RS30885 | 85253..85784 | + | 532 | Protein_80 | IS3 family transposase ISBvi3 | Transposase |
| NIX03_RS30890 | 85847..85987 | + | 141 | WP_080569432.1 | integrase | - |
| NIX03_RS30895 | 86246..86536 | - | 291 | WP_230674603.1 | IS6 family transposase ISBj7 | Transposase |
| NIX03_RS30900 | 86729..87016 | - | 288 | WP_017924497.1 | hypothetical protein | - |
| NIX03_RS30905 | 87214..87714 | - | 501 | WP_012734085.1 | hypothetical protein | VF |
| NIX03_RS30910 | 88074..89621 | - | 1548 | WP_012734086.1 | Methyl-accepting chemotaxis protein I | VF |
| NIX03_RS30915 | 89927..90548 | - | 622 | Protein_86 | DDE-type integrase/transposase/recombinase | - |
| NIX03_RS30920 | 90684..91343 | - | 660 | WP_012734087.1 | pyridoxamine 5'-phosphate oxidase family protein | - |
| NIX03_RS30925 | 91446..92228 | + | 783 | WP_012734088.1 | helix-turn-helix transcriptional regulator | - |
| NIX03_RS30935 | 94046..94300 | + | 255 | WP_012734091.1 | antitoxin | - |
| NIX03_RS30940 | 94291..94701 | + | 411 | WP_012734092.1 | type II toxin-antitoxin system VapC family toxin | - |
| NIX03_RS30945 | 94764..95081 | + | 318 | WP_043308427.1 | hypothetical protein | - |
| NIX03_RS30950 | 95116..95496 | + | 381 | WP_012734093.1 | hypothetical protein | - |
| NIX03_RS30955 | 95493..97334 | + | 1842 | WP_012734094.1 | site-specific integrase | - |
| NIX03_RS30960 | 97461..97772 | + | 312 | WP_127913983.1 | hypothetical protein | - |
| NIX03_RS30965 | 98409..98618 | + | 210 | WP_042968082.1 | hypothetical protein | - |
| NIX03_RS30970 | 99499..99804 | + | 306 | WP_012734095.1 | helix-turn-helix transcriptional regulator | - |
| NIX03_RS30975 | 100151..100756 | + | 606 | WP_158335139.1 | hypothetical protein | - |
| NIX03_RS30980 | 101020..101799 | + | 780 | WP_043308431.1 | hypothetical protein | - |
| NIX03_RS30985 | 101930..102298 | + | 369 | WP_045678674.1 | hypothetical protein | - |
| NIX03_RS30990 | 102341..102544 | + | 204 | Protein_101 | IS66 family transposase ISRm2 | Transposase |
| NIX03_RS30995 | 102631..103107 | + | 477 | WP_012734051.1 | IS66 family transposase ISRtr5 | Transposase |
| NIX03_RS31000 | 103083..103433 | + | 351 | WP_012732753.1 | IS66 family transposase ISBmu30 | Transposase |
| NIX03_RS31005 | 103465..105021 | + | 1557 | WP_012732752.1 | IS66 family transposase ISAeh1 | Transposase |
| NIX03_RS31010 | 105552..105779 | - | 228 | WP_020379863.1 | tyrosine-type recombinase/integrase | - |
| NIX03_RS31015 | 106172..107287 | - | 1116 | WP_012734097.1 | Sigma54-dependent transcriptional activator SfnR | VF |
| NIX03_RS31020 | 107400..108149 | - | 750 | Protein_107 | IS481 family transposase IS1419 | Transposase |
| NIX03_RS31025 | 108236..108691 | + | 456 | WP_012732735.1 | IS66 family transposase ISRtr5 | Transposase |
| NIX03_RS31030 | 108809..109855 | + | 1047 | WP_012734099.1 | IS481 family transposase IS1419 | Transposase |
| NIX03_RS31035 | 109913..110266 | + | 354 | WP_012732734.1 | IS66 family transposase ISBmu30 | Transposase |
| NIX03_RS31040 | 110366..111952 | + | 1587 | WP_012732733.1 | IS66 family transposase ISBmu30 | Transposase |
| NIX03_RS31045 | 112011..112313 | - | 303 | Protein_112 | IS481 family transposase IS1419 | Transposase |
| NIX03_RS31050 | 113215..113838 | + | 624 | WP_045678665.1 | FMN reductase | - |
| NIX03_RS31055 | 113868..114983 | + | 1116 | WP_012734101.1 | dimethyl sulfone monooxygenase SfnG | - |
| NIX03_RS31060 | 115139..115507 | - | 369 | Protein_115 | IS6 family transposase | - |
| NIX03_RS31065 | 115805..116830 | - | 1026 | WP_236702755.1 | thioredoxin | - |
| NIX03_RS31070 | 116800..117042 | - | 243 | WP_236702757.1 | thioredoxin domain-containing protein | - |
| NIX03_RS31075 | 117124..118896 | - | 1773 | WP_012734102.1 | ABC transporter ATP-binding protein/permease | - |
| NIX03_RS31080 | 118893..119315 | - | 423 | WP_012734103.1 | biopolymer transporter ExbD | - |
| NIX03_RS31085 | 119330..120064 | - | 735 | WP_012733849.1 | MotA/TolQ/ExbB proton channel family protein | - |
| NIX03_RS31090 | 120088..120834 | - | 747 | WP_232252306.1 | hypothetical protein | VF |
| NIX03_RS31095 | 120866..123241 | - | 2376 | WP_232252305.1 | TonB-dependent receptor | - |
| NIX03_RS31100 | 123555..124019 | - | 465 | WP_012734106.1 | Lrp/AsnC family transcriptional regulator | - |
| NIX03_RS31105 | 124242..124463 | - | 222 | WP_017433768.1 | hypothetical protein | - |
| NIX03_RS31110 | 124613..124807 | - | 195 | WP_124837685.1 | hypothetical protein | - |
| NIX03_RS31115 | 124866..125216 | - | 351 | WP_012734107.1 | type II toxin-antitoxin system ChpB family toxin | Toxin Detail |
| NIX03_RS31120 | 125210..125461 | - | 252 | WP_012734108.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | Antitoxin Detail |
| NIX03_RS31125 | 125724..126131 | - | 408 | WP_230674618.1 | hypothetical protein | - |
| NIX03_RS31130 | 126234..128069 | - | 1836 | WP_012732711.1 | site-specific integrase | - |
| NIX03_RS31135 | 128072..128413 | - | 342 | WP_012732710.1 | hypothetical protein | - |
| NIX03_RS31140 | 128470..128715 | - | 246 | WP_127913916.1 | hypothetical protein | - |
| NIX03_RS31145 | 128712..128954 | - | 243 | WP_124837682.1 | hypothetical protein | - |
| NIX03_RS31150 | 128968..129252 | - | 285 | WP_017432347.1 | hypothetical protein | - |
| NIX03_RS31155 | 129640..129963 | - | 324 | WP_043308435.1 | hypothetical protein | - |
| NIX03_RS31160 | 130141..130422 | - | 282 | WP_043308454.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| NIX03_RS31165 | 130426..130881 | - | 456 | WP_012734111.1 | hypothetical protein | - |
| NIX03_RS31170 | 131089..131331 | - | 243 | WP_043308436.1 | hypothetical protein | - |
| NIX03_RS31175 | 131491..131793 | - | 303 | WP_012734112.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| NIX03_RS31180 | 131783..132028 | - | 246 | WP_012734113.1 | type II toxin-antitoxin system ParD family antitoxin | - |
| NIX03_RS31185 | 132182..132376 | - | 195 | WP_043308437.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|