MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 132942 bp
Accession: NZ_CP100158 Location: 1..132942 Organism: Burkholderia glumae strain BGR49S Replicon: plasmid p49s1p
Accession: NZ_CP100158 Location: 1..132942 Organism: Burkholderia glumae strain BGR49S Replicon: plasmid p49s1p
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NIW54_RS30320 | 101..772 | + | 672 | WP_012734035.1 | AAA family ATPase | - |
| NIW54_RS30325 | 865..1233 | + | 369 | WP_257765398.1 | ParB N-terminal domain-containing protein | - |
| NIW54_RS30330 | 1517..1735 | + | 219 | WP_257765393.1 | hypothetical protein | - |
| NIW54_RS30335 | 2490..3347 | + | 858 | WP_012734037.1 | plasmid replication initiator TrfA | - |
| NIW54_RS30340 | 3611..4867 | + | 1257 | Protein_4 | IS21 family transposase ISAlisp1 | Transposase |
| NIW54_RS30345 | 4935..5801 | - | 867 | WP_012732871.1 | IS21 family transposase ISBcen28 | Transposase |
| NIW54_RS30350 | 5798..7054 | - | 1257 | WP_012734039.1 | IS21 family transposase ISBcen28 | Transposase |
| NIW54_RS30355 | 7180..7434 | + | 255 | Protein_7 | IS21 family transposase ISCsp4 | Transposase |
| NIW54_RS30360 | 7427..8182 | + | 756 | WP_012734041.1 | IS21 family transposase ISPa65 | Transposase |
| NIW54_RS30365 | 8213..9799 | - | 1587 | WP_012732733.1 | IS66 family transposase ISBmu30 | Transposase |
| NIW54_RS30370 | 9899..10252 | - | 354 | WP_012732734.1 | IS66 family transposase ISBmu30 | Transposase |
| NIW54_RS30375 | 10252..10707 | - | 456 | WP_012732735.1 | IS66 family transposase ISRtr5 | Transposase |
| NIW54_RS30380 | 11164..11466 | - | 303 | WP_257739416.1 | hypothetical protein | - |
| NIW54_RS30385 | 11539..11967 | - | 429 | WP_012734042.1 | type II toxin-antitoxin system VapC family toxin | - |
| NIW54_RS30390 | 11967..12224 | - | 258 | WP_012734043.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | - |
| NIW54_RS30395 | 12190..14586 | - | 2397 | WP_257765394.1 | IS91 family transposase ISAzo26 | Transposase |
| NIW54_RS30400 | 14657..15478 | - | 822 | WP_043308413.1 | hypothetical protein | - |
| NIW54_RS30405 | 15672..16205 | - | 534 | WP_148271068.1 | hypothetical protein | - |
| NIW54_RS30410 | 16528..17337 | - | 810 | Protein_18 | IS110 family transposase IS884 | Transposase |
| NIW54_RS30415 | 17525..18172 | - | 648 | Protein_19 | IS6 family transposase ISDge13 | Transposase |
| NIW54_RS30425 | 19828..22797 | + | 2970 | WP_257765395.1 | S-layer family protein | - |
| NIW54_RS30430 | 22794..23261 | + | 468 | WP_257765396.1 | hypothetical protein | - |
| NIW54_RS30435 | 23734..25872 | + | 2139 | WP_012734048.1 | Toxin RTX-I translocation ATP-binding protein | VF |
| NIW54_RS30440 | 25877..27295 | + | 1419 | WP_012734049.1 | Hemolysin secretion protein D, chromosomal | VF |
| NIW54_RS30445 | 27285..28736 | + | 1452 | WP_012734050.1 | Outer membrane protein TolC | VF |
| NIW54_RS30450 | 28914..29129 | + | 216 | WP_237711043.1 | IS66 family transposase ISRm2 | Transposase |
| NIW54_RS30455 | 29119..30237 | - | 1119 | Protein_27 | IS66 family transposase ISAeh1 | Transposase |
| NIW54_RS30460 | 30264..31820 | - | 1557 | WP_012732752.1 | IS66 family transposase ISAeh1 | Transposase |
| NIW54_RS30465 | 31852..32202 | - | 351 | WP_012732753.1 | IS66 family transposase ISBmu30 | Transposase |
| NIW54_RS30470 | 32178..32681 | - | 504 | WP_012732754.1 | IS66 family transposase ISRtr5 | Transposase |
| NIW54_RS33250 | 32718..33656 | + | 939 | WP_017433349.1 | hypothetical protein | VF |
| NIW54_RS30480 | 33784..34510 | - | 727 | Protein_32 | IS6 family transposase | - |
| NIW54_RS30485 | 34526..34924 | - | 399 | WP_012734052.1 | nuclear transport factor 2 family protein | - |
| NIW54_RS30490 | 35006..35947 | + | 942 | WP_012734053.1 | Glycine cleavage system transcriptional activator | VF |
| NIW54_RS30495 | 35950..36162 | + | 213 | WP_017424862.1 | hypothetical protein | - |
| NIW54_RS30500 | 36929..38167 | - | 1239 | WP_045678675.1 | FAD-dependent monooxygenase | - |
| NIW54_RS30505 | 38895..39746 | - | 852 | WP_012734056.1 | hypothetical protein | VF |
| NIW54_RS30510 | 39973..40392 | + | 420 | WP_012734057.1 | hypothetical protein | - |
| NIW54_RS30515 | 40700..41904 | + | 1205 | WP_085962364.1 | IS3 family transposase ISBugl1 | Transposase |
| NIW54_RS30520 | 42006..43243 | + | 1238 | WP_085962446.1 | IS3 family transposase IS1417 | Transposase |
| NIW54_RS30525 | 43275..43562 | + | 288 | Protein_41 | IS21 family transposase ISBmu3 | Transposase |
| NIW54_RS30530 | 43642..44688 | - | 1047 | WP_012734061.1 | IS481 family transposase IS1419 | Transposase |
| NIW54_RS30535 | 45401..45595 | - | 195 | WP_124837731.1 | hypothetical protein | - |
| NIW54_RS30540 | 45665..45967 | - | 303 | WP_127913981.1 | hypothetical protein | - |
| NIW54_RS30545 | 46031..46273 | - | 243 | WP_012734062.1 | hypothetical protein | - |
| NIW54_RS30550 | 46286..46549 | - | 264 | WP_017433216.1 | hypothetical protein | - |
| NIW54_RS30555 | 46561..46881 | - | 321 | WP_012734063.1 | type II toxin-antitoxin system PemK/MazF family toxin | - |
| NIW54_RS30560 | 46875..47123 | - | 249 | WP_012734064.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | - |
| NIW54_RS30565 | 47235..47906 | - | 672 | WP_012734065.1 | site-specific integrase | - |
| NIW54_RS30570 | 48031..48321 | - | 291 | WP_017425259.1 | Tn3 family transposase TnpR_ISThsp9 | Transposase |
| NIW54_RS30575 | 48361..49914 | - | 1554 | WP_102952664.1 | IS91 family transposase ISAzo26 | Transposase |
| NIW54_RS30580 | 50911..51594 | + | 684 | WP_012734068.1 | Adenylyl-sulfate kinase | VF |
| NIW54_RS30585 | 51667..52482 | + | 816 | WP_035976812.1 | sulfotransferase | - |
| NIW54_RS30590 | 52598..52864 | - | 267 | Protein_54 | IS1182 family transposase ISThsp18 | Transposase |
| NIW54_RS30595 | 53014..54309 | + | 1296 | WP_012734070.1 | aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme | - |
| NIW54_RS30600 | 54668..55687 | - | 1020 | WP_012734071.1 | IS110 family transposase IS884 | Transposase |
| NIW54_RS30605 | 55890..56707 | + | 818 | WP_085962447.1 | IS5-like element ISBugl2 family transposase | - |
| NIW54_RS30610 | 57007..57603 | + | 597 | WP_017432949.1 | HD-GYP domain-containing protein | - |
| NIW54_RS30615 | 57899..58997 | + | 1099 | Protein_59 | tyrosine-type recombinase/integrase | - |
| NIW54_RS30620 | 59121..60704 | - | 1584 | WP_012732724.1 | hypothetical protein | VF |
| NIW54_RS30625 | 61187..61531 | + | 345 | WP_017432531.1 | hypothetical protein | - |
| NIW54_RS30630 | 61571..63267 | + | 1697 | Protein_62 | Methyl-accepting chemotaxis protein I | VF |
| NIW54_RS30635 | 63252..65270 | + | 2019 | WP_276585468.1 | hypothetical protein | VF |
| NIW54_RS30640 | 65388..65876 | + | 489 | WP_080569430.1 | hypothetical protein | - |
| NIW54_RS30645 | 66202..66583 | - | 382 | Protein_65 | transposase | - |
| NIW54_RS30650 | 66714..67531 | + | 818 | WP_085962346.1 | IS5-like element ISBugl2 family transposase | - |
| NIW54_RS33255 | 68348..69907 | + | 1560 | WP_012734076.1 | Aerotaxis receptor | VF |
| NIW54_RS30665 | 70006..70705 | + | 700 | Protein_68 | IS3 family transposase | - |
| NIW54_RS30670 | 70768..71271 | + | 504 | WP_012734077.1 | IS66 family transposase ISRtr5 | Transposase |
| NIW54_RS30675 | 71247..71597 | + | 351 | WP_012732753.1 | IS66 family transposase ISBmu30 | Transposase |
| NIW54_RS30680 | 71629..73185 | + | 1557 | WP_012732752.1 | IS66 family transposase ISAeh1 | Transposase |
| NIW54_RS30685 | 73212..73544 | + | 333 | Protein_72 | IS3 family transposase IS1416 | Transposase |
| NIW54_RS30690 | 73576..76110 | - | 2535 | WP_158335140.1 | Sensor histidine kinase RcsC | VF |
| NIW54_RS30695 | 76260..77038 | - | 779 | Protein_74 | HTH-type transcriptional activator RhaS | VF |
| NIW54_RS30700 | 77258..77995 | - | 738 | WP_017423070.1 | Regulator of RpoS | VF |
| NIW54_RS30705 | 78210..79011 | + | 802 | Protein_76 | IS5 family transposase | - |
| NIW54_RS30715 | 81050..82039 | + | 990 | WP_257765391.1 | hypothetical protein | - |
| NIW54_RS30720 | 82135..83982 | + | 1848 | WP_012734082.1 | clostripain-related cysteine peptidase | - |
| NIW54_RS30725 | 84161..84966 | + | 806 | WP_085962449.1 | IS5 family transposase IS1421 | Transposase |
| NIW54_RS30730 | 84941..85120 | - | 180 | Protein_81 | hypothetical protein | - |
| NIW54_RS30735 | 85242..85773 | + | 532 | Protein_82 | IS3 family transposase ISBvi3 | Transposase |
| NIW54_RS30740 | 85836..85976 | + | 141 | WP_080569432.1 | integrase | - |
| NIW54_RS30745 | 86235..86525 | - | 291 | WP_230674603.1 | DDE-type integrase/transposase/recombinase | - |
| NIW54_RS30750 | 86718..87005 | - | 288 | WP_017924497.1 | hypothetical protein | - |
| NIW54_RS30755 | 87203..87703 | - | 501 | WP_012734085.1 | hypothetical protein | VF |
| NIW54_RS30760 | 88062..89609 | - | 1548 | WP_012734086.1 | Methyl-accepting chemotaxis protein I | VF |
| NIW54_RS30765 | 89915..90536 | - | 622 | Protein_88 | DDE-type integrase/transposase/recombinase | - |
| NIW54_RS30770 | 90672..91331 | - | 660 | WP_012734087.1 | pyridoxamine 5'-phosphate oxidase family protein | - |
| NIW54_RS30775 | 91434..92216 | + | 783 | WP_012734088.1 | helix-turn-helix transcriptional regulator | - |
| NIW54_RS30785 | 94034..94288 | + | 255 | WP_012734091.1 | antitoxin | - |
| NIW54_RS30790 | 94279..94689 | + | 411 | WP_012734092.1 | type II toxin-antitoxin system VapC family toxin | - |
| NIW54_RS30795 | 94752..95069 | + | 318 | WP_043308427.1 | hypothetical protein | - |
| NIW54_RS30800 | 95104..95484 | + | 381 | WP_012734093.1 | hypothetical protein | - |
| NIW54_RS30805 | 95481..97322 | + | 1842 | WP_012734094.1 | site-specific integrase | - |
| NIW54_RS30810 | 97449..97760 | + | 312 | WP_127913983.1 | hypothetical protein | - |
| NIW54_RS30815 | 98397..98606 | + | 210 | WP_042968082.1 | hypothetical protein | - |
| NIW54_RS30820 | 99487..99792 | + | 306 | WP_012734095.1 | helix-turn-helix transcriptional regulator | - |
| NIW54_RS30825 | 100139..100744 | + | 606 | WP_158335139.1 | hypothetical protein | - |
| NIW54_RS30830 | 101008..101787 | + | 780 | WP_043308431.1 | hypothetical protein | - |
| NIW54_RS30835 | 101918..102286 | + | 369 | WP_045678674.1 | hypothetical protein | - |
| NIW54_RS30840 | 102329..102532 | + | 204 | Protein_103 | IS66 family transposase ISRm2 | Transposase |
| NIW54_RS30845 | 102592..103095 | + | 504 | WP_012732754.1 | IS66 family transposase ISRtr5 | Transposase |
| NIW54_RS30850 | 103071..103421 | + | 351 | WP_012732753.1 | IS66 family transposase ISBmu30 | Transposase |
| NIW54_RS30855 | 103453..104983 | + | 1531 | Protein_106 | IS66 family transposase ISPpu13 | Transposase |
| NIW54_RS30860 | 105540..105767 | - | 228 | WP_020379863.1 | tyrosine-type recombinase/integrase | - |
| NIW54_RS30865 | 106160..107275 | - | 1116 | WP_012734097.1 | Sigma54-dependent transcriptional activator SfnR | VF |
| NIW54_RS30870 | 107388..108136 | - | 749 | Protein_109 | IS481 family transposase IS1419 | Transposase |
| NIW54_RS30875 | 108223..108678 | + | 456 | WP_012732735.1 | IS66 family transposase ISRtr5 | Transposase |
| NIW54_RS30880 | 108796..109842 | + | 1047 | WP_012734099.1 | IS481 family transposase IS1419 | Transposase |
| NIW54_RS30885 | 109900..110253 | + | 354 | WP_012732734.1 | IS66 family transposase ISBmu30 | Transposase |
| NIW54_RS30890 | 110353..111939 | + | 1587 | WP_012732733.1 | IS66 family transposase ISBmu30 | Transposase |
| NIW54_RS30895 | 111998..112300 | - | 303 | Protein_114 | IS481 family transposase IS1419 | Transposase |
| NIW54_RS30900 | 113202..113825 | + | 624 | WP_045678665.1 | FMN reductase | - |
| NIW54_RS30905 | 113855..114970 | + | 1116 | WP_012734101.1 | dimethyl sulfone monooxygenase SfnG | - |
| NIW54_RS30910 | 115126..115493 | - | 368 | Protein_117 | IS6 family transposase | - |
| NIW54_RS30915 | 115847..116815 | - | 969 | WP_257765392.1 | thioredoxin | - |
| NIW54_RS30920 | 116785..117027 | - | 243 | WP_236702757.1 | thioredoxin domain-containing protein | - |
| NIW54_RS30925 | 117109..118881 | - | 1773 | WP_012734102.1 | ABC transporter ATP-binding protein/permease | - |
| NIW54_RS30930 | 118878..119300 | - | 423 | WP_012734103.1 | biopolymer transporter ExbD | - |
| NIW54_RS30935 | 119315..120049 | - | 735 | WP_012733849.1 | MotA/TolQ/ExbB proton channel family protein | - |
| NIW54_RS30940 | 120073..120819 | - | 747 | WP_232252306.1 | hypothetical protein | VF |
| NIW54_RS30945 | 120851..123226 | - | 2376 | WP_232252305.1 | TonB-dependent receptor | - |
| NIW54_RS30950 | 123540..124004 | - | 465 | WP_012734106.1 | Lrp/AsnC family transcriptional regulator | - |
| NIW54_RS30955 | 124227..124448 | - | 222 | WP_017433768.1 | hypothetical protein | - |
| NIW54_RS30960 | 124598..124792 | - | 195 | WP_124837685.1 | hypothetical protein | - |
| NIW54_RS30965 | 124851..125201 | - | 351 | WP_012734107.1 | type II toxin-antitoxin system ChpB family toxin | Toxin Detail |
| NIW54_RS30970 | 125195..125446 | - | 252 | WP_012734108.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | Antitoxin Detail |
| NIW54_RS30975 | 125709..126116 | - | 408 | WP_230674618.1 | hypothetical protein | - |
| NIW54_RS30980 | 126219..128054 | - | 1836 | WP_012732711.1 | site-specific integrase | - |
| NIW54_RS30985 | 128057..128398 | - | 342 | WP_012732710.1 | hypothetical protein | - |
| NIW54_RS30990 | 128455..128700 | - | 246 | WP_127913916.1 | hypothetical protein | - |
| NIW54_RS30995 | 128697..128939 | - | 243 | WP_124837682.1 | hypothetical protein | - |
| NIW54_RS31000 | 128953..129237 | - | 285 | WP_017432347.1 | hypothetical protein | - |
| NIW54_RS31005 | 129625..129948 | - | 324 | WP_043308435.1 | hypothetical protein | - |
| NIW54_RS31010 | 130126..130407 | - | 282 | WP_043308454.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| NIW54_RS31015 | 130411..130866 | - | 456 | WP_012734111.1 | hypothetical protein | - |
| NIW54_RS31020 | 131074..131316 | - | 243 | WP_043308436.1 | hypothetical protein | - |
| NIW54_RS31025 | 131476..131778 | - | 303 | WP_012734112.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| NIW54_RS31030 | 131768..132013 | - | 246 | WP_012734113.1 | type II toxin-antitoxin system ParD family antitoxin | - |
| NIW54_RS31035 | 132167..132361 | - | 195 | WP_043308437.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|