MGE detailed information
MGE type: Conjugative plasmid MGE length: 94061 bp
Accession: NZ_CP100112 Location: 1..94061 Organism: Klebsiella pneumoniae strain HSKP104 Replicon: plasmid pHSKP104-2
Accession: NZ_CP100112 Location: 1..94061 Organism: Klebsiella pneumoniae strain HSKP104 Replicon: plasmid pHSKP104-2
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NIL12_RS27260 (NIL12_27240) | 19..894 | + | 876 | WP_004098982.1 | replication initiation protein | - |
| NIL12_RS27265 (NIL12_27245) | 1543..2169 | + | 627 | WP_004197649.1 | hypothetical protein | VF |
| NIL12_RS27270 (NIL12_27250) | 2166..2468 | + | 303 | WP_004197636.1 | hypothetical protein | - |
| NIL12_RS27275 (NIL12_27255) | 2916..3710 | - | 795 | WP_004197635.1 | site-specific integrase | - |
| NIL12_RS27280 (NIL12_27260) | 3908..4924 | - | 1017 | WP_017899884.1 | hypothetical protein | - |
| NIL12_RS27285 (NIL12_27265) | 4935..5249 | - | 315 | WP_053389906.1 | hypothetical protein | - |
| NIL12_RS27290 (NIL12_27270) | 5276..5671 | - | 396 | WP_017899885.1 | hypothetical protein | - |
| NIL12_RS27295 (NIL12_27275) | 5840..6145 | - | 306 | WP_013023785.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| NIL12_RS27300 (NIL12_27280) | 6147..6365 | - | 219 | WP_001568025.1 | type II toxin-antitoxin system antitoxin CcdA | Antitoxin Detail |
| NIL12_RS27305 (NIL12_27285) | 6535..6996 | - | 462 | WP_160880186.1 | hypothetical protein | - |
| NIL12_RS27310 (NIL12_27290) | 6953..7183 | + | 231 | WP_001261282.1 | type II toxin-antitoxin system VapB family antitoxin | Antitoxin Detail |
| NIL12_RS27315 (NIL12_27295) | 7180..7596 | + | 417 | WP_001044770.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| NIL12_RS27320 (NIL12_27300) | 7670..9232 | + | 1563 | WP_004206609.1 | AAA family ATPase | - |
| NIL12_RS27325 (NIL12_27305) | 9217..10239 | + | 1023 | WP_000361404.1 | helicase UvrD | - |
| NIL12_RS27330 (NIL12_27310) | 10495..11192 | + | 698 | WP_223174630.1 | IS1 family transposase ISKpn14 | Transposase |
| NIL12_RS27335 (NIL12_27315) | 11221..11493 | + | 273 | Protein_15 | transposase | - |
| NIL12_RS27340 (NIL12_27320) | 11773..12777 | - | 1005 | WP_000427619.1 | IS110 family transposase IS5075 | Transposase |
| NIL12_RS27345 (NIL12_27325) | 12856..13290 | - | 435 | WP_000429836.1 | IS607 family transposase ISChh1 | Transposase |
| NIL12_RS27350 (NIL12_27330) | 13362..13712 | + | 351 | WP_001294663.1 | mercuric transport protein MerT | - |
| NIL12_RS27355 (NIL12_27335) | 13726..14001 | + | 276 | WP_000732292.1 | mercury resistance system periplasmic binding protein MerP | - |
| NIL12_RS27360 (NIL12_27340) | 14037..14459 | + | 423 | WP_001340589.1 | organomercurial transporter MerC | - |
| NIL12_RS27365 (NIL12_27345) | 14511..16205 | + | 1695 | WP_000105636.1 | mercury(II) reductase | - |
| NIL12_RS27370 (NIL12_27350) | 16223..16585 | + | 363 | WP_001277456.1 | mercury resistance co-regulator MerD | - |
| NIL12_RS27375 (NIL12_27355) | 16582..16818 | + | 237 | WP_000993386.1 | broad-spectrum mercury transporter MerE | - |
| NIL12_RS27380 (NIL12_27360) | 16854..17522 | + | 669 | WP_001300294.1 | putative signaling protein | VF |
| NIL12_RS27385 (NIL12_27365) | 17597..18847 | + | 1251 | Protein_25 | transposase | - |
| NIL12_RS27390 (NIL12_27370) | 18912..19616 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| NIL12_RS27395 (NIL12_27375) | 19668..20129 | + | 462 | Protein_27 | Tn3 family transposase TnpR_Tn3 | Transposase |
| NIL12_RS27400 (NIL12_27380) | 20252..21232 | + | 981 | WP_013213985.1 | IS481 family transposase ISKpn27 | Transposase |
| NIL12_RS27405 (NIL12_27385) | 21508..22389 | + | 882 | WP_004199234.1 | Carbapenem-hydrolyzing beta-lactamase KPC | ARG |
| NIL12_RS27410 (NIL12_27390) | 22639..23520 | - | 882 | Protein_30 | IS1182 family transposase ISKpn6 | Transposase |
| NIL12_RS27415 (NIL12_27395) | 23624..23920 | - | 297 | WP_013213987.1 | transcriptional regulator | - |
| NIL12_RS27420 (NIL12_27400) | 23966..24121 | - | 156 | WP_013213988.1 | hypothetical protein | - |
| NIL12_RS27425 (NIL12_27405) | 24249..24674 | - | 426 | WP_013213989.1 | antirestriction protein | - |
| NIL12_RS27430 (NIL12_27410) | 24785..25063 | - | 279 | WP_013213990.1 | hypothetical protein | - |
| NIL12_RS27435 (NIL12_27415) | 25597..26214 | - | 618 | Protein_35 | replication protein | - |
| NIL12_RS27440 (NIL12_27420) | 26606..27166 | + | 561 | WP_001161490.1 | Tn3 family transposase TnpR_TnAs1 | Transposase |
| NIL12_RS27445 (NIL12_27425) | 27170..30136 | + | 2967 | WP_001138014.1 | Tn3 family transposase TnpA_TnAs1 | Transposase |
| NIL12_RS27450 (NIL12_27430) | 30170..30472 | + | 303 | Protein_38 | IS6 family transposase IS26 | Transposase |
| NIL12_RS27455 (NIL12_27435) | 30674..31147 | - | 474 | WP_013213991.1 | GNAT family N-acetyltransferase | - |
| NIL12_RS27460 (NIL12_27440) | 31567..32079 | - | 513 | Protein_40 | ISL3 family transposase ISEc38 | Transposase |
| NIL12_RS27465 (NIL12_27445) | 32083..32415 | - | 333 | WP_013213994.1 | hypothetical protein | - |
| NIL12_RS27470 (NIL12_27450) | 32801..33712 | - | 912 | WP_013213995.1 | hypothetical protein | - |
| NIL12_RS27475 (NIL12_27455) | 33764..35706 | - | 1943 | Protein_43 | hypothetical protein | - |
| NIL12_RS27480 (NIL12_27460) | 35710..36603 | - | 894 | WP_013213999.1 | hypothetical protein | - |
| NIL12_RS27485 (NIL12_27465) | 36611..37852 | - | 1242 | WP_013213998.1 | N-6 DNA methylase | - |
| NIL12_RS27490 (NIL12_27470) | 39172..40047 | - | 876 | WP_072101968.1 | incFII family plasmid replication initiator RepA | - |
| NIL12_RS27495 (NIL12_27475) | 40345..40602 | - | 258 | WP_015344940.1 | replication regulatory protein RepA | - |
| NIL12_RS27500 (NIL12_27480) | 40734..41285 | - | 552 | WP_015344941.1 | Cardiolipin synthase A | VF |
| NIL12_RS27505 (NIL12_27485) | 41389..41697 | - | 309 | WP_004152383.1 | hypothetical protein | - |
| NIL12_RS27510 (NIL12_27490) | 41694..42344 | - | 651 | WP_014343480.1 | DUF2726 domain-containing protein | - |
| NIL12_RS27515 (NIL12_27495) | 42400..43044 | - | 645 | WP_004153014.1 | hypothetical protein | - |
| NIL12_RS27520 (NIL12_27500) | 43094..43696 | - | 603 | WP_013023836.1 | PIN domain-containing protein | - |
| NIL12_RS27525 (NIL12_27505) | 43857..44450 | - | 594 | WP_004152380.1 | fertility inhibition protein FinO | - |
| NIL12_RS27530 (NIL12_27510) | 44522..45247 | - | 726 | WP_014386207.1 | type-F conjugative transfer system pilin acetylase TraX | - |
| NIL12_RS27535 (NIL12_27515) | 45292..50550 | - | 5259 | WP_014386206.1 | Multifunctional conjugation protein TraI | Relaxase |
| NIL12_RS27540 (NIL12_27520) | 50550..52859 | - | 2310 | WP_014386205.1 | type IV conjugative transfer system coupling protein TraD | - |
| NIL12_RS27545 (NIL12_27525) | 52986..53675 | - | 690 | WP_013023831.1 | hypothetical protein | - |
| NIL12_RS27550 (NIL12_27530) | 53868..54599 | - | 732 | WP_013214036.1 | conjugal transfer complement resistance protein TraT | - |
| NIL12_RS27555 (NIL12_27535) | 54850..55452 | - | 603 | WP_013214035.1 | conjugal transfer protein TraS | - |
| NIL12_RS27560 (NIL12_27540) | 55475..58297 | - | 2823 | WP_013214034.1 | conjugal transfer mating-pair stabilization protein TraG | - |
| NIL12_RS27565 (NIL12_27545) | 58297..59676 | - | 1380 | WP_072157884.1 | conjugal transfer pilus assembly protein TraH | - |
| NIL12_RS27570 (NIL12_27550) | 59654..60097 | - | 444 | WP_013214032.1 | F-type conjugal transfer protein TrbF | - |
| NIL12_RS27575 (NIL12_27555) | 60143..60700 | - | 558 | WP_013214031.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| NIL12_RS27580 (NIL12_27560) | 60672..60911 | - | 240 | WP_004144400.1 | type-F conjugative transfer system pilin chaperone TraQ | - |
| NIL12_RS27585 (NIL12_27565) | 60922..61674 | - | 753 | WP_004152677.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| NIL12_RS27590 (NIL12_27570) | 61695..62021 | - | 327 | WP_004152676.1 | hypothetical protein | - |
| NIL12_RS27595 (NIL12_27575) | 62034..62282 | - | 249 | WP_004152675.1 | hypothetical protein | - |
| NIL12_RS27600 (NIL12_27580) | 62260..62514 | - | 255 | WP_004152674.1 | conjugal transfer protein TrbE | - |
| NIL12_RS27605 (NIL12_27585) | 62546..64501 | - | 1956 | WP_030003482.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| NIL12_RS27610 (NIL12_27590) | 64560..65198 | - | 639 | WP_069985712.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| NIL12_RS27615 (NIL12_27595) | 65211..66200 | - | 990 | WP_029497420.1 | conjugal transfer pilus assembly protein TraU | - |
| NIL12_RS27620 (NIL12_27600) | 66197..66598 | - | 402 | WP_004194979.1 | hypothetical protein | - |
| NIL12_RS27625 (NIL12_27605) | 66633..67268 | - | 636 | WP_029497419.1 | type-F conjugative transfer system protein TraW | - |
| NIL12_RS27630 (NIL12_27610) | 67268..67657 | - | 390 | WP_004167468.1 | type-F conjugative transfer system protein TrbI | - |
| NIL12_RS27635 (NIL12_27615) | 67657..70296 | - | 2640 | WP_013214024.1 | type IV secretion system protein TraC | - |
| NIL12_RS27640 (NIL12_27620) | 70368..70766 | - | 399 | WP_023179972.1 | hypothetical protein | - |
| NIL12_RS27645 (NIL12_27625) | 71145..71549 | - | 405 | WP_004197817.1 | hypothetical protein | - |
| NIL12_RS27650 (NIL12_27630) | 71616..71927 | - | 312 | WP_029497417.1 | hypothetical protein | - |
| NIL12_RS27655 (NIL12_27635) | 71928..72146 | - | 219 | WP_004195468.1 | hypothetical protein | - |
| NIL12_RS27660 (NIL12_27640) | 72469..73053 | - | 585 | WP_032440547.1 | type IV conjugative transfer system lipoprotein TraV | - |
| NIL12_RS27665 (NIL12_27645) | 73126..74550 | - | 1425 | WP_004194260.1 | F-type conjugal transfer pilus assembly protein TraB | - |
| NIL12_RS27670 (NIL12_27650) | 74550..75290 | - | 741 | WP_013023821.1 | type-F conjugative transfer system secretin TraK | - |
| NIL12_RS27675 (NIL12_27655) | 75277..75843 | - | 567 | WP_004144423.1 | type IV conjugative transfer system protein TraE | - |
| NIL12_RS27680 (NIL12_27660) | 75863..76168 | - | 306 | WP_004144424.1 | type IV conjugative transfer system protein TraL | - |
| NIL12_RS27685 (NIL12_27665) | 76182..76550 | - | 369 | WP_004194426.1 | type IV conjugative transfer system pilin TraA | - |
| NIL12_RS27690 | 76619..76819 | - | 201 | WP_004194116.1 | TraY domain-containing protein | - |
| NIL12_RS27695 (NIL12_27670) | 76905..77606 | - | 702 | WP_004194113.1 | hypothetical protein | - |
| NIL12_RS27700 (NIL12_27675) | 77836..78228 | - | 393 | WP_004194114.1 | conjugal transfer relaxosome DNA-binding protein TraM | - |
| NIL12_RS27705 (NIL12_27680) | 78660..79145 | + | 486 | WP_032440470.1 | hypothetical protein | VF |
| NIL12_RS27710 (NIL12_27685) | 79178..79507 | - | 330 | WP_071994324.1 | DUF5983 family protein | - |
| NIL12_RS27715 (NIL12_27690) | 79540..80361 | - | 822 | WP_023287138.1 | DUF932 domain-containing protein | - |
| NIL12_RS27720 (NIL12_27695) | 81186..81749 | - | 564 | WP_004152756.1 | methyltransferase | - |
| NIL12_RS27725 (NIL12_27700) | 81797..83152 | - | 1356 | WP_013054814.1 | DUF3560 domain-containing protein | - |
| NIL12_RS27730 (NIL12_27705) | 83204..83434 | - | 231 | WP_001568051.1 | hypothetical protein | - |
| NIL12_RS27735 (NIL12_27710) | 83526..83753 | - | 228 | WP_001568050.1 | hypothetical protein | - |
| NIL12_RS27740 (NIL12_27715) | 84496..84816 | - | 321 | WP_032436760.1 | hypothetical protein | - |
| NIL12_RS27745 (NIL12_27720) | 84851..85105 | - | 255 | WP_011977779.1 | DNA polymerase III subunit theta | - |
| NIL12_RS27750 (NIL12_27725) | 85293..85484 | - | 192 | WP_001568047.1 | hypothetical protein | - |
| NIL12_RS27755 (NIL12_27730) | 85527..86033 | - | 507 | WP_013214014.1 | antirestriction protein ArdA | - |
| NIL12_RS27760 (NIL12_27735) | 86076..86504 | - | 429 | WP_001568045.1 | antirestriction protein | - |
| NIL12_RS27765 (NIL12_27740) | 87185..87952 | - | 768 | WP_013214013.1 | hypothetical protein | - |
| NIL12_RS27770 (NIL12_27745) | 88006..88425 | - | 420 | WP_001568043.1 | DUF1380 domain-containing protein | - |
| NIL12_RS27775 (NIL12_27750) | 88435..88656 | - | 222 | WP_001568042.1 | hypothetical protein | - |
| NIL12_RS27780 (NIL12_27755) | 88656..89357 | - | 702 | WP_001568041.1 | DNA methylase | - |
| NIL12_RS27785 (NIL12_27760) | 89429..89598 | - | 170 | Protein_105 | hypothetical protein | - |
| NIL12_RS27790 (NIL12_27765) | 89794..90024 | - | 231 | WP_001568040.1 | hypothetical protein | - |
| NIL12_RS27795 (NIL12_27770) | 90087..90758 | - | 672 | WP_013214012.1 | plasmid partitioning/stability family protein | - |
| NIL12_RS27800 (NIL12_27775) | 90761..91732 | - | 972 | WP_004152353.1 | plasmid segregation protein ParM | - |
| NIL12_RS27805 (NIL12_27780) | 91966..92397 | + | 432 | WP_001568036.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| NIL12_RS27810 (NIL12_27785) | 92397..93668 | + | 1272 | WP_004197646.1 | Y-family DNA polymerase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|