MGE detailed information
MGE type: Prophage MGE length: 76175 bp
Accession: NZ_CP099367 Location: 2143958..2220132 Organism: Citrobacter portucalensis strain RHB40-E3-C05 Replicon: chromosome
Accession: NZ_CP099367 Location: 2143958..2220132 Organism: Citrobacter portucalensis strain RHB40-E3-C05 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NFK63_RS10440 () | 2139463..2140029 | + | 567 | WP_003833855.1 | VOC family protein | - |
| NFK63_RS10445 () | 2140032..2140778 | + | 747 | WP_279275823.1 | copper homeostasis protein CutC | - |
| NFK63_RS10450 () | 2141009..2141977 | - | 969 | WP_191222440.1 | tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase CmoB | - |
| NFK63_RS10455 () | 2141974..2142717 | - | 744 | WP_003034686.1 | carboxy-S-adenosyl-L-methionine synthase CmoA | - |
| NFK63_RS10460 () | 2142758..2143153 | - | 396 | WP_003833847.1 | MAPEG family protein | - |
| NFK63_RS10465 () | 2143206..2143949 | - | 744 | Protein_2049 | DUF72 domain-containing protein | - |
| NFK63_RS10470 () | 2143958..2145271 | - | 1314 | WP_279275824.1 | Putative defective protein IntQ ; Integrase | Integrase |
| NFK63_RS10475 () | 2145330..2145566 | - | 237 | WP_003839185.1 | excisionase family protein | - |
| NFK63_RS10480 () | 2145607..2146176 | - | 570 | WP_057064719.1 | 3'-5' exonuclease | - |
| NFK63_RS10485 () | 2146178..2146927 | - | 750 | WP_279275825.1 | hypothetical protein | - |
| NFK63_RS10490 () | 2146938..2147693 | - | 756 | WP_279275826.1 | hypothetical protein | - |
| NFK63_RS10495 () | 2147695..2148144 | - | 450 | WP_279275827.1 | ead/Ea22-like family protein | - |
| NFK63_RS10500 () | 2148141..2148395 | - | 255 | WP_000215603.1 | hypothetical protein | - |
| NFK63_RS10505 () | 2148392..2148568 | - | 177 | WP_279275828.1 | hypothetical protein | - |
| NFK63_RS10510 () | 2148556..2149095 | - | 540 | WP_071696451.1 | hypothetical protein | - |
| NFK63_RS10515 () | 2149224..2150051 | - | 828 | WP_106107104.1 | DUF2303 family protein | - |
| NFK63_RS10520 () | 2150109..2150480 | - | 372 | WP_044691226.1 | hypothetical protein | - |
| NFK63_RS10525 () | 2151066..2151305 | + | 240 | WP_070810425.1 | hypothetical protein | - |
| NFK63_RS10530 () | 2151276..2151524 | - | 249 | WP_077958572.1 | hypothetical protein | - |
| NFK63_RS10535 () | 2151775..2152407 | - | 633 | WP_070810424.1 | S24 family peptidase | - |
| NFK63_RS10540 () | 2152505..2152729 | + | 225 | WP_070810423.1 | helix-turn-helix transcriptional regulator | - |
| NFK63_RS10545 () | 2152794..2153342 | + | 549 | WP_111305010.1 | YmfL family putative regulatory protein | - |
| NFK63_RS10550 () | 2153515..2153694 | + | 180 | WP_003034732.1 | DUF4222 domain-containing protein | - |
| NFK63_RS10555 () | 2153684..2154541 | + | 858 | WP_279275829.1 | conserved phage C-terminal domain-containing protein | - |
| NFK63_RS10560 () | 2154538..2155419 | + | 882 | WP_033816620.1 | phage N-6-adenine-methyltransferase | - |
| NFK63_RS10565 () | 2155412..2157346 | + | 1935 | WP_033816619.1 | DNA cytosine methyltransferase | - |
| NFK63_RS10570 () | 2157343..2157741 | + | 399 | WP_000780154.1 | RusA family crossover junction endodeoxyribonuclease | - |
| NFK63_RS10575 () | 2157828..2158715 | + | 888 | WP_279275830.1 | ORF6N domain-containing protein | - |
| NFK63_RS10580 () | 2158712..2159707 | + | 996 | WP_279275831.1 | DUF968 domain-containing protein | - |
| NFK63_RS10585 () | 2159725..2160087 | + | 363 | WP_279275832.1 | antiterminator Q family protein | - |
| NFK63_RS10590 () | 2160143..2160424 | - | 282 | WP_279275833.1 | hypothetical protein | - |
| NFK63_RS10595 () | 2160903..2161172 | + | 270 | WP_103856873.1 | hypothetical protein | - |
| NFK63_RS10615 () | 2162163..2162441 | + | 279 | WP_001568784.1 | phage holin | - |
| NFK63_RS10620 () | 2162413..2162961 | + | 549 | WP_032652451.1 | lysozyme | - |
| NFK63_RS10625 () | 2162958..2163464 | + | 507 | WP_032652448.1 | DUF2514 domain-containing protein | - |
| NFK63_RS10630 () | 2163675..2163791 | + | 117 | WP_229046080.1 | YnfU family zinc-binding protein | - |
| NFK63_RS10635 () | 2163858..2164055 | + | 198 | WP_048221277.1 | hypothetical protein | - |
| NFK63_RS10640 () | 2164119..2164469 | + | 351 | WP_016239647.1 | HNH endonuclease signature motif containing protein | - |
| NFK63_RS10645 () | 2164596..2165093 | + | 498 | WP_046669959.1 | phage terminase small subunit P27 family | - |
| NFK63_RS10650 () | 2165090..2166823 | + | 1734 | WP_150388528.1 | terminase large subunit | - |
| NFK63_RS10655 () | 2166820..2166981 | + | 162 | WP_046671243.1 | hypothetical protein | - |
| NFK63_RS10660 () | 2166971..2168197 | + | 1227 | WP_046671242.1 | phage portal protein | - |
| NFK63_RS10665 () | 2168190..2168789 | + | 600 | WP_046671241.1 | HK97 family phage prohead protease | - |
| NFK63_RS10670 () | 2168799..2170016 | + | 1218 | WP_279275836.1 | phage major capsid protein | - |
| NFK63_RS10675 () | 2170090..2170413 | + | 324 | WP_150388530.1 | head-tail connector protein | - |
| NFK63_RS10680 () | 2170410..2170823 | + | 414 | WP_150388531.1 | phage head closure protein | - |
| NFK63_RS10685 () | 2170798..2171301 | + | 504 | WP_150388532.1 | hypothetical protein | - |
| NFK63_RS10690 () | 2171301..2171861 | + | 561 | WP_000761759.1 | hypothetical protein | - |
| NFK63_RS10695 () | 2171870..2172046 | + | 177 | WP_000497746.1 | DUF2635 domain-containing protein | - |
| NFK63_RS10700 () | 2172036..2173535 | + | 1500 | WP_279275837.1 | phage tail sheath subtilisin-like domain-containing protein | - |
| NFK63_RS10705 () | 2173535..2173891 | + | 357 | WP_001137307.1 | phage tail tube protein | - |
| NFK63_RS10710 () | 2173891..2174160 | + | 270 | WP_005120659.1 | phage tail assembly protein | - |
| NFK63_RS10715 () | 2174302..2176092 | + | 1791 | WP_150388533.1 | phage tail tape measure protein | - |
| NFK63_RS10720 () | 2176177..2176671 | + | 495 | WP_150388534.1 | hypothetical protein | - |
| NFK63_RS10725 () | 2176726..2178027 | + | 1302 | WP_150388535.1 | DNA circularization N-terminal domain-containing protein | - |
| NFK63_RS10730 () | 2178024..2179103 | + | 1080 | WP_150388536.1 | baseplate protein | - |
| NFK63_RS10735 () | 2179103..2179651 | + | 549 | WP_150388537.1 | phage baseplate assembly protein V | - |
| NFK63_RS10740 () | 2179651..2180076 | + | 426 | WP_150388538.1 | phage GP46 family protein | - |
| NFK63_RS10745 () | 2180063..2181121 | + | 1059 | WP_279275839.1 | baseplate J/gp47 family protein | - |
| NFK63_RS10750 () | 2181112..2181693 | + | 582 | WP_150388539.1 | YmfQ family protein | - |
| NFK63_RS10755 () | 2181705..2182031 | + | 327 | Protein_2104 | hypothetical protein | - |
| NFK63_RS10760 () | 2182604..2182936 | + | 333 | WP_279275840.1 | tail fiber assembly protein | - |
| NFK63_RS10765 () | 2183005..2183247 | - | 243 | WP_000497431.1 | DinI-like family protein | - |
| NFK63_RS10770 () | 2183326..2183658 | + | 333 | WP_048216169.1 | hypothetical protein | - |
| NFK63_RS10775 () | 2183850..2184260 | + | 411 | WP_275397587.1 | hemerythrin domain-containing protein | - |
| NFK63_RS10780 () | 2184346..2184585 | - | 240 | WP_000497460.1 | DinI family protein | - |
| NFK63_RS10785 () | 2184847..2184942 | - | 96 | Protein_2110 | hypothetical protein | - |
| NFK63_RS10790 () | 2184939..2185505 | - | 567 | WP_126317822.1 | hydrolase | - |
| NFK63_RS10795 () | 2185793..2187565 | + | 1773 | WP_003833841.1 | aspartate--tRNA ligase | - |
| NFK63_RS10800 () | 2187567..2188010 | + | 444 | WP_003833839.1 | dihydroneopterin triphosphate diphosphatase | - |
| NFK63_RS10805 () | 2188039..2188782 | + | 744 | WP_003833836.1 | putative transcriptional regulatory protein YebC | VF |
| NFK63_RS10810 () | 2188817..2189338 | + | 522 | WP_003034867.1 | crossover junction endodeoxyribonuclease RuvC | - |
| NFK63_RS10815 () | 2189419..2190030 | + | 612 | WP_003034869.1 | Holliday junction branch migration protein RuvA | - |
| NFK63_RS10820 () | 2190039..2191049 | + | 1011 | WP_003034872.1 | Holliday junction branch migration DNA helicase RuvB | - |
| NFK63_RS10825 () | 2191128..2191913 | - | 786 | WP_003833831.1 | High-affinity zinc uptake system membrane protein ZnuB | VF |
| NFK63_RS10830 () | 2191910..2192665 | - | 756 | WP_279275841.1 | Zinc import ATP-binding protein ZnuC | VF |
| NFK63_RS10835 () | 2192744..2193688 | + | 945 | WP_063940898.1 | zinc ABC transporter substrate-binding protein ZnuA | - |
| NFK63_RS10840 () | 2193704..2195023 | + | 1320 | WP_003833825.1 | murein DD-endopeptidase MepM | - |
| NFK63_RS10845 () | 2195144..2196115 | + | 972 | WP_126317825.1 | Lipid A biosynthesis myristoyltransferase | VF |
| NFK63_RS10850 () | 2196162..2197604 | - | 1443 | WP_003833821.1 | pyruvate kinase | - |
| NFK63_RS10855 () | 2197724..2198593 | - | 870 | WP_126319786.1 | MurR/RpiR family transcriptional regulator | - |
| NFK63_RS10860 () | 2198958..2200433 | + | 1476 | WP_003833817.1 | glucose-6-phosphate dehydrogenase | - |
| NFK63_RS10865 () | 2200667..2202478 | + | 1812 | WP_279275842.1 | phosphogluconate dehydratase | - |
| NFK63_RS10870 () | 2202513..2203154 | + | 642 | WP_003034901.1 | bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase | - |
| NFK63_RS10875 () | 2203257..2204435 | - | 1179 | WP_003833812.1 | formate-dependent phosphoribosylglycinamide formyltransferase | - |
| NFK63_RS10880 () | 2204568..2204858 | + | 291 | WP_032943780.1 | DNA damage-inducible protein YebG | - |
| NFK63_RS10885 () | 2204980..2205333 | + | 354 | WP_126317828.1 | protein YebF | - |
| NFK63_RS10890 () | 2205428..2206087 | + | 660 | WP_063940875.1 | tellurite resistance TerB family protein | - |
| NFK63_RS10895 () | 2206174..2208228 | + | 2055 | WP_186336565.1 | oligopeptidase B | - |
| NFK63_RS10900 () | 2208219..2208881 | - | 663 | WP_003833802.1 | exodeoxyribonuclease X | - |
| NFK63_RS10905 () | 2208905..2209561 | - | 657 | WP_003833801.1 | carbon-nitrogen hydrolase family protein | - |
| NFK63_RS10910 () | 2209668..2209898 | - | 231 | WP_279275843.1 | DNA polymerase III subunit theta | - |
| NFK63_RS10915 () | 2210042..2210416 | + | 375 | WP_003833799.1 | CopC domain-containing protein YobA | - |
| NFK63_RS10920 () | 2210420..2211292 | + | 873 | WP_279275844.1 | copper homeostasis membrane protein CopD | - |
| NFK63_RS10925 () | 2211313..2211651 | + | 339 | WP_003833793.1 | YebY family protein | - |
| - | 2211772..2211915 | - | 144 | - | - | Antitoxin Detail |
| - | 2211807..2211910 | + | 104 | - | - | Toxin Detail |
| NFK63_RS10930 () | 2212064..2212705 | + | 642 | WP_003833791.1 | protein-serine/threonine phosphatase | - |
| NFK63_RS10935 () | 2212706..2212897 | - | 192 | WP_003034941.1 | YebW family protein | - |
| NFK63_RS10940 () | 2213000..2213236 | - | 237 | WP_029139506.1 | YebV family protein | - |
| NFK63_RS10945 () | 2213337..2214725 | - | 1389 | WP_279275957.1 | 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF | - |
| NFK63_RS10950 () | 2214838..2217471 | - | 2634 | WP_279275845.1 | Intermembrane transport protein YebT | VF |
| NFK63_RS10955 () | 2217440..2218723 | - | 1284 | WP_003833783.1 | membrane integrity lipid transport subunit YebS | - |
| NFK63_RS10960 () | 2218852..2219349 | + | 498 | WP_003833782.1 | GAF domain-containing protein | - |
| NFK63_RS10965 () | 2219446..2220132 | + | 687 | WP_003833781.1 | RNA chaperone ProQ | - |
| NFK63_RS10970 () | 2220152..2222200 | + | 2049 | WP_048235216.1 | carboxy terminal-processing peptidase | - |
| NFK63_RS10975 () | 2222393..2223274 | + | 882 | WP_003034964.1 | protease HtpX | - |
| NFK63_RS10980 () | 2223322..2224695 | - | 1374 | WP_279275846.1 | MFS transporter | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|