MGE detailed information
MGE type: Mobilizable plasmid MGE length: 77112 bp
Accession: NZ_CP098764 Location: 1..77112 Organism: Sphingomonas aerolata strain PDD-32b-11 Replicon: plasmid unnamed2
Accession: NZ_CP098764 Location: 1..77112 Organism: Sphingomonas aerolata strain PDD-32b-11 Replicon: plasmid unnamed2
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NEF64_RS18490 (NEF64_18490) | 3465..4334 | - | 870 | WP_252575034.1 | Glucose-1-phosphate thymidylyltransferase | VF |
| NEF64_RS18495 (NEF64_18495) | 4331..5272 | - | 942 | WP_252575036.1 | dTDP-4-dehydrorhamnose reductase | - |
| NEF64_RS18500 (NEF64_18500) | 5269..6324 | - | 1056 | WP_252575038.1 | dTDP-glucose 4,6-dehydratase | VF |
| NEF64_RS18505 (NEF64_18505) | 6339..6896 | - | 558 | WP_252575084.1 | hypothetical protein | VF |
| NEF64_RS18510 (NEF64_18510) | 6979..8244 | - | 1266 | WP_252575041.1 | UDP-N-acetylgalactosamine-undecaprenyl-phosphate N-acetylgalactosaminephosphotransferase | VF |
| NEF64_RS18515 (NEF64_18515) | 8383..9525 | - | 1143 | WP_252575043.1 | glycoside hydrolase family 55 protein | - |
| NEF64_RS18520 (NEF64_18520) | 9663..10382 | - | 720 | WP_252575045.1 | glycosyltransferase family 2 protein | - |
| NEF64_RS18525 (NEF64_18525) | 10382..11443 | - | 1062 | WP_252575047.1 | glycosyltransferase | - |
| NEF64_RS18530 (NEF64_18530) | 11440..12219 | - | 780 | WP_252575049.1 | glycosyltransferase family 2 protein | - |
| NEF64_RS18535 (NEF64_18535) | 12216..13214 | - | 999 | WP_252575051.1 | EpsG family protein | - |
| NEF64_RS18540 (NEF64_18540) | 13211..14311 | - | 1101 | WP_252575053.1 | glycosyltransferase family 4 protein | - |
| NEF64_RS18545 (NEF64_18545) | 14308..15594 | - | 1287 | WP_252575055.1 | O-antigen translocase | - |
| NEF64_RS18550 (NEF64_18550) | 15604..16680 | - | 1077 | WP_252575079.1 | dTDP-3-amino-3,4,6-trideoxy-alpha-D-glucose transaminase | VF |
| NEF64_RS18555 (NEF64_18555) | 16704..17636 | - | 933 | WP_252575057.1 | UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase | VF |
| NEF64_RS18560 (NEF64_18560) | 17829..19193 | + | 1365 | WP_252575059.1 | O-antigen ligase family protein | - |
| NEF64_RS18565 (NEF64_18565) | 19275..19985 | + | 711 | WP_252575061.1 | hypothetical protein | VF |
| NEF64_RS18570 (NEF64_18570) | 20000..22192 | + | 2193 | WP_252575063.1 | polysaccharide biosynthesis tyrosine autokinase | - |
| NEF64_RS18575 (NEF64_18575) | 22189..23427 | + | 1239 | WP_252575065.1 | hypothetical protein | - |
| NEF64_RS18580 (NEF64_18580) | 23918..24925 | + | 1008 | WP_252575066.1 | Tn3 family transposase TnpR_TnXo19 | Transposase |
| NEF64_RS18585 (NEF64_18585) | 25379..26260 | + | 882 | WP_252575067.1 | replication initiator protein A | - |
| NEF64_RS18590 (NEF64_18590) | 26974..27663 | + | 690 | WP_252575068.1 | helix-turn-helix domain-containing protein | - |
| NEF64_RS18595 (NEF64_18595) | 29434..30255 | - | 822 | WP_252575069.1 | hypothetical protein | VF |
| NEF64_RS18600 (NEF64_18600) | 30252..30695 | - | 444 | WP_252575070.1 | outer membrane protein assembly factor BamE | - |
| NEF64_RS18605 (NEF64_18605) | 30757..36111 | - | 5355 | WP_252575071.1 | YadA-like family protein | - |
| NEF64_RS18610 (NEF64_18610) | 36329..36937 | - | 609 | WP_252575073.1 | hypothetical protein | - |
| NEF64_RS18615 (NEF64_18615) | 37346..37933 | - | 588 | WP_252575076.1 | Tn3 family transposase ISPsy42 | Transposase |
| NEF64_RS18620 (NEF64_18620) | 38061..41012 | + | 2952 | WP_252575077.1 | Tn3 family transposase TnpA_ISAzs29 | Transposase |
| NEF64_RS18625 (NEF64_18625) | 41601..42800 | - | 1200 | WP_252574988.1 | replication initiator protein A | - |
| NEF64_RS18630 (NEF64_18630) | 42904..43944 | - | 1041 | WP_252574989.1 | ParB/RepB/Spo0J family partition protein | - |
| NEF64_RS18635 (NEF64_18635) | 44007..45203 | - | 1197 | WP_252574990.1 | AAA family ATPase | - |
| NEF64_RS18640 (NEF64_18640) | 45634..46182 | - | 549 | WP_252574991.1 | GNAT family N-acetyltransferase | - |
| NEF64_RS18645 (NEF64_18645) | 46179..46487 | - | 309 | WP_252574992.1 | DUF1778 domain-containing protein | - |
| NEF64_RS18650 (NEF64_18650) | 46736..46987 | - | 252 | Protein_33 | hypothetical protein | - |
| NEF64_RS18655 (NEF64_18655) | 47028..48671 | - | 1644 | WP_252574993.1 | type IV secretory system conjugative DNA transfer family protein | - |
| NEF64_RS18660 (NEF64_18660) | 48766..49104 | - | 339 | WP_252574994.1 | hypothetical protein | - |
| NEF64_RS18665 (NEF64_18665) | 49104..49658 | - | 555 | WP_252574996.1 | recombinase family protein | - |
| NEF64_RS18670 (NEF64_18670) | 49660..49971 | - | 312 | WP_056405697.1 | hypothetical protein | - |
| NEF64_RS18675 (NEF64_18675) | 49968..50192 | - | 225 | WP_133192513.1 | conjugal transfer protein TraD | - |
| NEF64_RS18680 (NEF64_18680) | 50206..50535 | - | 330 | WP_252574998.1 | conjugal transfer protein TraD | - |
| NEF64_RS18685 (NEF64_18685) | 50710..53625 | + | 2916 | WP_252575000.1 | ATP-dependent RecD-like DNA helicase | Relaxase |
| NEF64_RS18690 (NEF64_18690) | 53629..54366 | + | 738 | WP_156360267.1 | DUF6118 family protein | - |
| NEF64_RS18695 (NEF64_18695) | 54402..54746 | + | 345 | WP_156360266.1 | hypothetical protein | - |
| NEF64_RS18700 (NEF64_18700) | 54879..55157 | - | 279 | WP_082446612.1 | BrnA antitoxin family protein | Antitoxin Detail |
| NEF64_RS18705 (NEF64_18705) | 55138..55464 | - | 327 | WP_159513481.1 | BrnT family toxin | Toxin Detail |
| NEF64_RS18710 (NEF64_18710) | 55528..56025 | - | 498 | WP_235516303.1 | hypothetical protein | - |
| NEF64_RS18715 (NEF64_18715) | 56069..56632 | - | 564 | WP_252575002.1 | Tn3 family transposase TnpR_ISAzs17 | Transposase |
| NEF64_RS18720 (NEF64_18720) | 56819..57001 | + | 183 | WP_252575005.1 | hypothetical protein | - |
| NEF64_RS18725 (NEF64_18725) | 57078..57410 | + | 333 | WP_252575082.1 | YnfA family protein | - |
| NEF64_RS18730 (NEF64_18730) | 57622..57978 | + | 357 | Protein_49 | Tn3 family transposase TnpR_Tn5403 | Transposase |
| NEF64_RS18735 (NEF64_18735) | 58268..59434 | + | 1167 | WP_252575012.1 | hypothetical protein | - |
| NEF64_RS18740 (NEF64_18740) | 59893..60699 | + | 807 | WP_252575014.1 | hypothetical protein | - |
| NEF64_RS18745 (NEF64_18745) | 61116..62573 | + | 1458 | WP_252575016.1 | serine hydrolase domain-containing protein | - |
| NEF64_RS18750 (NEF64_18750) | 63407..64048 | - | 642 | WP_192143054.1 | DsbA family protein | - |
| NEF64_RS18755 (NEF64_18755) | 64324..65793 | - | 1470 | WP_252575017.1 | tetratricopeptide repeat-containing sulfotransferase family protein | - |
| NEF64_RS18760 (NEF64_18760) | 66056..67237 | + | 1182 | WP_192143058.1 | NF038122 family metalloprotease | - |
| NEF64_RS18765 (NEF64_18765) | 67501..67887 | - | 387 | WP_252575019.1 | hypothetical protein | - |
| NEF64_RS18770 (NEF64_18770) | 67971..68276 | + | 306 | WP_252575021.1 | hypothetical protein | - |
| NEF64_RS18775 (NEF64_18775) | 68984..69685 | + | 702 | WP_252575023.1 | hypothetical protein | - |
| NEF64_RS18780 (NEF64_18780) | 70230..70586 | - | 357 | WP_252575025.1 | hypothetical protein | - |
| NEF64_RS18785 (NEF64_18785) | 70833..71318 | + | 486 | WP_252575027.1 | hypothetical protein | - |
| NEF64_RS18790 (NEF64_18790) | 71845..72294 | + | 450 | WP_252575030.1 | hypothetical protein | - |
| NEF64_RS18795 (NEF64_18795) | 72642..73210 | + | 569 | Protein_62 | recombinase family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|