MGE detailed information
MGE type: Prophage MGE length: 61440 bp
Accession: NZ_CP098691 Location: 2064100..2125539 Organism: Yersinia ruckeri strain NVI-8524 Replicon: chromosome
Accession: NZ_CP098691 Location: 2064100..2125539 Organism: Yersinia ruckeri strain NVI-8524 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ND441_RS09440 (ND441_09430) | 2060573..2061202 | + | 630 | WP_004721714.1 | hypothetical protein | - |
| ND441_RS09445 (ND441_09435) | 2061409..2062095 | + | 687 | WP_004721715.1 | hypothetical protein | - |
| ND441_RS09450 (ND441_09440) | 2062836..2063981 | + | 1146 | WP_004721718.1 | YRC family class C beta-lactamase | - |
| ND441_RS09455 (ND441_09445) | 2064061..2064705 | + | 645 | WP_248583726.1 | hypothetical protein ; Integrase | Integrase |
| ND441_RS09460 (ND441_09450) | 2065004..2065171 | + | 168 | WP_193553623.1 | hypothetical protein | - |
| ND441_RS09465 (ND441_09455) | 2065476..2067767 | - | 2292 | WP_096823432.1 | AAA family ATPase | - |
| ND441_RS09470 (ND441_09460) | 2068251..2069978 | - | 1728 | WP_096823433.1 | ISNCY family transposase ISPa4 | Transposase |
| ND441_RS09475 (ND441_09465) | 2070223..2078571 | - | 8349 | WP_096823434.1 | LPD5 domain-containing protein | - |
| ND441_RS09480 (ND441_09470) | 2078837..2078998 | - | 162 | WP_157836120.1 | hypothetical protein | - |
| ND441_RS09485 (ND441_09475) | 2079073..2080461 | - | 1389 | WP_096823435.1 | hypothetical protein | - |
| ND441_RS09490 (ND441_09480) | 2080474..2080734 | - | 261 | WP_096823436.1 | bacteriocin | - |
| ND441_RS09495 (ND441_09485) | 2080734..2081117 | - | 384 | WP_096823437.1 | hypothetical protein | - |
| ND441_RS09500 (ND441_09490) | 2081120..2081779 | - | 660 | WP_096823438.1 | hypothetical protein | - |
| ND441_RS09505 (ND441_09495) | 2082035..2082409 | - | 375 | WP_096823439.1 | hypothetical protein | - |
| ND441_RS09510 (ND441_09500) | 2082384..2083412 | - | 1029 | WP_096823440.1 | hypothetical protein | - |
| ND441_RS09515 (ND441_09505) | 2083479..2084693 | - | 1215 | WP_038246004.1 | DUF1983 domain-containing protein | - |
| ND441_RS09520 (ND441_09510) | 2084690..2086318 | - | 1629 | WP_096823441.1 | hypothetical protein | - |
| ND441_RS09525 (ND441_09515) | 2086644..2087075 | + | 432 | Protein_1850 | Hcp family type VI secretion system effector | - |
| ND441_RS09530 (ND441_09520) | 2087197..2087343 | - | 147 | WP_157836125.1 | hypothetical protein | - |
| ND441_RS09535 (ND441_09525) | 2087728..2090097 | - | 2370 | WP_096823442.1 | prophage tail fiber N-terminal domain-containing protein | - |
| ND441_RS09540 (ND441_09530) | 2090094..2090747 | - | 654 | WP_096823443.1 | hypothetical protein | - |
| ND441_RS09545 (ND441_09535) | 2090747..2091334 | - | 588 | WP_096823444.1 | hypothetical protein | - |
| ND441_RS09550 (ND441_09540) | 2091337..2091777 | - | 441 | WP_038245291.1 | hypothetical protein | - |
| ND441_RS09555 (ND441_09545) | 2091832..2092215 | - | 384 | WP_096823445.1 | hypothetical protein | - |
| ND441_RS09560 (ND441_09550) | 2092278..2093501 | - | 1224 | WP_038245287.1 | N4-gp56 family major capsid protein | - |
| ND441_RS09565 (ND441_09555) | 2093562..2094614 | - | 1053 | WP_096823446.1 | hypothetical protein | - |
| ND441_RS09570 (ND441_09560) | 2094885..2097011 | - | 2127 | WP_096823447.1 | portal protein | - |
| ND441_RS09575 (ND441_09565) | 2097011..2098675 | - | 1665 | WP_096823679.1 | terminase | - |
| ND441_RS09580 (ND441_09570) | 2098714..2099571 | - | 858 | WP_096823448.1 | terminase | - |
| ND441_RS09585 (ND441_09575) | 2099637..2099981 | - | 345 | WP_051847063.1 | Gp49 family protein | - |
| ND441_RS09590 (ND441_09580) | 2099978..2100520 | - | 543 | WP_096823449.1 | DUF2570 domain-containing protein | - |
| ND441_RS09595 (ND441_09585) | 2100652..2101140 | - | 489 | WP_096823450.1 | lysozyme | - |
| ND441_RS09600 (ND441_09590) | 2101140..2101352 | - | 213 | WP_038245276.1 | class II holin family protein | - |
| ND441_RS09605 (ND441_09595) | 2101525..2102334 | - | 810 | WP_096823451.1 | hypothetical protein | - |
| ND441_RS09610 (ND441_09600) | 2102425..2102808 | - | 384 | WP_096823452.1 | hypothetical protein | - |
| ND441_RS09615 (ND441_09605) | 2102833..2103303 | - | 471 | WP_096823453.1 | VRR-NUC domain-containing protein | - |
| ND441_RS09620 (ND441_09610) | 2103296..2103628 | - | 333 | WP_096823454.1 | DUF1364 domain-containing protein | - |
| ND441_RS09625 (ND441_09615) | 2103630..2104277 | - | 648 | WP_096823455.1 | DUF1367 family protein | - |
| ND441_RS09630 (ND441_09620) | 2104274..2106286 | - | 2013 | WP_096823456.1 | MT-A70 family methyltransferase | - |
| ND441_RS09635 (ND441_09625) | 2106283..2107209 | - | 927 | WP_096823457.1 | site-specific DNA-methyltransferase | - |
| ND441_RS09640 (ND441_09630) | 2107206..2107553 | - | 348 | WP_096823458.1 | hypothetical protein | - |
| ND441_RS09645 (ND441_09635) | 2107553..2107723 | - | 171 | WP_238692875.1 | DNA translocase FtsK | - |
| ND441_RS09650 (ND441_09640) | 2107790..2108689 | - | 900 | Protein_1875 | recombination-associated protein RdgC | - |
| ND441_RS09655 (ND441_09645) | 2108693..2109466 | - | 774 | WP_096823460.1 | hypothetical protein | - |
| ND441_RS09660 (ND441_09650) | 2109469..2110314 | - | 846 | WP_096823461.1 | hypothetical protein | - |
| ND441_RS09665 (ND441_09655) | 2110323..2110502 | - | 180 | WP_096823462.1 | hypothetical protein | - |
| ND441_RS09670 (ND441_09660) | 2110499..2110861 | - | 363 | WP_096823463.1 | hypothetical protein | - |
| ND441_RS09675 (ND441_09665) | 2110947..2111252 | + | 306 | WP_038243388.1 | hypothetical protein | - |
| ND441_RS09680 (ND441_09670) | 2111334..2111600 | - | 267 | WP_096823464.1 | hypothetical protein | - |
| ND441_RS09685 (ND441_09675) | 2111710..2112381 | + | 672 | WP_096823465.1 | S24 family peptidase | - |
| ND441_RS09690 (ND441_09680) | 2112397..2112747 | + | 351 | WP_096823466.1 | hypothetical protein | - |
| ND441_RS09695 (ND441_09685) | 2113021..2113266 | + | 246 | WP_126940131.1 | hypothetical protein | - |
| ND441_RS09700 (ND441_09690) | 2113349..2113618 | + | 270 | WP_096823468.1 | KTSC domain-containing protein | - |
| ND441_RS09705 (ND441_09695) | 2113658..2114128 | + | 471 | WP_096823469.1 | zinc-finger-containing protein | - |
| ND441_RS09710 (ND441_09700) | 2114144..2114470 | + | 327 | WP_126940132.1 | hypothetical protein | - |
| ND441_RS09715 (ND441_09705) | 2114771..2115616 | + | 846 | WP_238692848.1 | phage recombination protein Bet | - |
| ND441_RS09720 (ND441_09710) | 2115603..2117207 | + | 1605 | WP_096823471.1 | YqaJ viral recombinase family protein | - |
| ND441_RS09725 (ND441_09715) | 2117252..2118391 | + | 1140 | WP_096823472.1 | hypothetical protein | - |
| ND441_RS09730 (ND441_09720) | 2118388..2118816 | + | 429 | WP_096823473.1 | hypothetical protein | - |
| ND441_RS09735 (ND441_09725) | 2118881..2119717 | + | 837 | WP_202976849.1 | hypothetical protein | - |
| ND441_RS09740 (ND441_09730) | 2119861..2120034 | + | 174 | WP_170854680.1 | hypothetical protein | - |
| ND441_RS09745 (ND441_09735) | 2120225..2120479 | + | 255 | WP_193553624.1 | hypothetical protein | - |
| ND441_RS09750 (ND441_09740) | 2120596..2120865 | + | 270 | WP_096823474.1 | excisionase | - |
| ND441_RS09755 (ND441_09745) | 2120840..2121949 | + | 1110 | WP_162486764.1 | hypothetical protein ; Integrase | Integrase |
| - | 2122022..2122168 | + | 147 | - | - | Antitoxin Detail |
| - | 2122026..2122119 | - | 94 | - | - | Toxin Detail |
| ND441_RS09760 (ND441_09750) | 2122278..2122619 | - | 342 | WP_004721721.1 | YebY family protein | - |
| ND441_RS09765 (ND441_09755) | 2122714..2123598 | - | 885 | WP_004721723.1 | copper homeostasis membrane protein CopD | - |
| ND441_RS09770 (ND441_09760) | 2123600..2123986 | - | 387 | WP_038243346.1 | CopC domain-containing protein YobA | - |
| ND441_RS09775 (ND441_09765) | 2124391..2124906 | - | 516 | WP_004721727.1 | non-heme ferritin | - |
| ND441_RS09780 (ND441_09770) | 2125309..2125539 | + | 231 | WP_038243344.1 | DNA polymerase III subunit theta | - |
| ND441_RS09785 (ND441_09775) | 2125662..2126612 | - | 951 | WP_004721733.1 | prolyl aminopeptidase | - |
| ND441_RS09790 (ND441_09780) | 2127479..2128142 | + | 664 | Protein_1903 | exodeoxyribonuclease X | - |
| ND441_RS09795 (ND441_09785) | 2128148..2130178 | - | 2031 | WP_038276022.1 | prolyl oligopeptidase family serine peptidase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|