MGE detailed information
MGE type: Prophage MGE length: 39506 bp
Accession: NZ_CP098231 Location: 2290082..2329587 Organism: Escherichia coli strain XJ34 Replicon: chromosome
Accession: NZ_CP098231 Location: 2290082..2329587 Organism: Escherichia coli strain XJ34 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| KFZ60_RS11025 (2285982) | 2285982..2287202 | + | 1221 | WP_000225276.1 | DNA-binding transcriptional repressor Mlc | - |
| KFZ60_RS11030 (2287327) | 2287327..2288022 | + | 696 | WP_000919226.1 | dethiobiotin synthase | - |
| KFZ60_RS11035 (2287975) | 2287975..2289267 | - | 1293 | WP_071524606.1 | voltage-gated ClC-type chloride channel ClcB | - |
| KFZ60_RS11040 (2289425) | 2289425..2290039 | - | 615 | WP_047624846.1 | Tat proofreading chaperone DmsD | - |
| KFZ60_RS11045 (2290082) | 2290082..2290936 | - | 855 | WP_000526477.1 | dimethyl sulfoxide reductase anchor subunit family protein | - |
| KFZ60_RS11050 (2290938) | 2290938..2291555 | - | 618 | WP_000213028.1 | dimethylsulfoxide reductase subunit B | - |
| KFZ60_RS11055 (2291566) | 2291566..2293989 | - | 2424 | WP_077773446.1 | DmsA/YnfE/YnfF family dimethyl sulfoxide reductase | - |
| KFZ60_RS11060 (2294050) | 2294050..2296476 | - | 2427 | WP_088376224.1 | DmsA/YnfE/YnfF family dimethyl sulfoxide reductase | - |
| KFZ60_RS11065 (2296674) | 2296674..2296979 | - | 306 | WP_001295396.1 | DUF1161 domain-containing protein | - |
| KFZ60_RS11070 (2297087) | 2297087..2297797 | + | 711 | WP_072129879.1 | YnfC family lipoprotein | - |
| KFZ60_RS11075 (2297800) | 2297800..2298360 | - | 561 | WP_001138584.1 | spermidine N1-acetyltransferase | - |
| KFZ60_RS11080 (2298395) | 2298395..2298736 | - | 342 | WP_000705197.1 | DUF1283 family protein | - |
| KFZ60_RS11085 (2298871) | 2298871..2299197 | + | 327 | WP_000598292.1 | YnfA family protein | - |
| KFZ60_RS11090 (2299403) | 2299403..2300617 | + | 1215 | WP_088376225.1 | starvation-sensing protein RspA | - |
| KFZ60_RS11095 (2300629) | 2300629..2301648 | + | 1020 | WP_088376226.1 | Zn-dependent oxidoreductase | - |
| KFZ60_RS11100 (2301836) | 2301836..2303116 | - | 1281 | WP_000876958.1 | Putative defective protein IntQ ; Integrase | Integrase |
| KFZ60_RS11105 (2303151) | 2303151..2303402 | - | 252 | WP_000005552.1 | excisionase family protein | - |
| KFZ60_RS11110 (2303475) | 2303475..2305184 | - | 1710 | Protein_2171 | 3'-5' exoribonuclease | - |
| KFZ60_RS11115 (2305172) | 2305172..2305429 | + | 258 | Protein_2172 | hypothetical protein | - |
| KFZ60_RS11120 (2305470) | 2305470..2305892 | + | 423 | WP_001151262.1 | DUF977 family protein | - |
| KFZ60_RS11125 (2305889) | 2305889..2306378 | + | 490 | Protein_2174 | class I SAM-dependent methyltransferase | - |
| KFZ60_RS11130 (2306856) | 2306856..2307277 | + | 422 | Protein_2175 | hypothetical protein | - |
| KFZ60_RS11135 (2307933) | 2307933..2308955 | + | 1023 | Protein_2176 | ISNCY family transposase ISCARN112 | Transposase |
| KFZ60_RS11140 (2309076) | 2309076..2309225 | + | 150 | WP_011443592.1 | ISNCY family transposase ISCARN112 | Transposase |
| KFZ60_RS11145 (2309662) | 2309662..2309994 | - | 333 | WP_001301033.1 | FlxA-like family protein | - |
| KFZ60_RS11150 (2310197) | 2310197..2310502 | - | 306 | WP_001326990.1 | protein YdfV | - |
| KFZ60_RS11155 (2310527) | 2310527..2310766 | + | 240 | WP_000534858.1 | type II toxin-antitoxin system antitoxin RelB | Antitoxin Detail |
| KFZ60_RS11160 (2310766) | 2310766..2311053 | + | 288 | WP_000323025.1 | type II toxin-antitoxin system mRNA interferase RelE | Toxin Detail |
| KFZ60_RS11165 (2311125) | 2311125..2311280 | + | 156 | WP_088376227.1 | type I toxin-antitoxin system toxin HokD | - |
| KFZ60_RS11170 (2311497) | 2311497..2311748 | + | 252 | WP_000980994.1 | protein Rem | - |
| KFZ60_RS11175 (2311815) | 2311815..2312093 | + | 279 | WP_012304870.1 | hypothetical protein | - |
| KFZ60_RS11180 (2312095) | 2312095..2313144 | + | 1050 | WP_001265198.1 | DUF968 domain-containing protein | - |
| KFZ60_RS11185 (2313158) | 2313158..2313910 | + | 753 | WP_001047135.1 | antitermination protein | - |
| KFZ60_RS11190 (2314188) | 2314188..2314277 | - | 90 | WP_120795389.1 | hypothetical protein | - |
| KFZ60_RS11195 (2314332) | 2314332..2314544 | - | 213 | WP_000087756.1 | cold shock-like protein CspF | - |
| KFZ60_RS11200 (2314845) | 2314845..2315060 | + | 216 | WP_000066484.1 | cold shock-like protein CspB | - |
| KFZ60_RS11205 (2315424) | 2315424..2315594 | - | 171 | WP_211180497.1 | putative zinc-binding protein YnfU | - |
| KFZ60_RS11210 (2315814) | 2315814..2316029 | + | 216 | WP_000839590.1 | phage lysis protein EssD | - |
| KFZ60_RS11215 (2316034) | 2316034..2316345 | + | 312 | WP_000189916.1 | YdfR family protein | - |
| KFZ60_RS11220 (2316342) | 2316342..2316875 | + | 534 | WP_001092971.1 | lysozyme | - |
| KFZ60_RS11225 (2316872) | 2316872..2317369 | + | 498 | WP_032191976.1 | DUF2514 domain-containing protein | - |
| KFZ60_RS11230 (2317732) | 2317732..2317944 | + | 213 | WP_000066495.1 | cold shock protein CspI | - |
| KFZ60_RS11235 (2317955) | 2317955..2318143 | + | 189 | WP_071524604.1 | cold-shock protein | - |
| KFZ60_RS11240 (2318146) | 2318146..2318211 | + | 66 | WP_123040679.1 | small protein YnfR | - |
| KFZ60_RS11245 (2318216) | 2318216..2318446 | + | 231 | WP_000720962.1 | protein YnfN | - |
| KFZ60_RS11250 (2318618) | 2318618..2318791 | + | 174 | WP_001019606.1 | addiction module toxin, GnsA/GnsB family | - |
| KFZ60_RS11255 (2318943) | 2318943..2319353 | - | 411 | WP_000373090.1 | DUF1398 domain-containing protein | - |
| KFZ60_RS11260 (2319411) | 2319411..2319644 | - | 234 | WP_001368374.1 | YlcI/YnfO family protein | - |
| KFZ60_RS11265 (2320033) | 2320033..2320578 | + | 546 | WP_000453576.1 | DNA-packaging protein | - |
| KFZ60_RS11270 (2320553) | 2320553..2321599 | + | 1047 | Protein_2203 | phage terminase large subunit family protein | - |
| KFZ60_RS11275 (2321886) | 2321886..2323916 | + | 2031 | WP_047662356.1 | phage tail protein | - |
| KFZ60_RS11280 (2323916) | 2323916..2324491 | + | 576 | WP_088376228.1 | tail fiber assembly protein | - |
| KFZ60_RS11285 (2324589) | 2324589..2325179 | - | 591 | WP_000078178.1 | Tn3 family transposase TnpR_ISSba14 | Transposase |
| KFZ60_RS11290 (2325496) | 2325496..2325729 | - | 234 | WP_000836768.1 | cold shock protein YdfK | - |
| KFZ60_RS11295 (2325798) | 2325798..2325911 | - | 114 | WP_120795384.1 | YnaM/YnfT family protein | - |
| KFZ60_RS11300 (2326515) | 2326515..2327798 | + | 1284 | Protein_2209 | MHS family MFS transporter YdfJ | - |
| KFZ60_RS11305 (2327888) | 2327888..2329348 | + | 1461 | WP_089534775.1 | mannitol dehydrogenase family protein | - |
| KFZ60_RS11310 (2329384) | 2329384..2329587 | - | 204 | WP_000214712.1 | putative selenium delivery protein YdfZ | - |
| KFZ60_RS11315 (2329764) | 2329764..2330450 | - | 687 | WP_000215549.1 | DNA-binding transcriptional regulator rspR | - |
| KFZ60_RS11320 (2330539) | 2330539..2331285 | - | 747 | WP_000636575.1 | bifunctional NADP-dependent 3-hydroxy acid dehydrogenase/3-hydroxypropionate dehydrogenase YdfG | - |
| KFZ60_RS11325 (2331422) | 2331422..2333467 | + | 2046 | WP_088376326.1 | peptidyl-dipeptidase Dcp | - |
| KFZ60_RS11330 (2333512) | 2333512..2334030 | - | 519 | WP_001024558.1 | 2-oxo-tetronate isomerase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|