MGE detailed information
MGE type: IScluster/Tn MGE length: 33993 bp
Accession: NZ_CP097839 Location: 571..34563 Organism: Shigella flexneri strain B Replicon: plasmid unnamed2
Accession: NZ_CP097839 Location: 571..34563 Organism: Shigella flexneri strain B Replicon: plasmid unnamed2
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| M9380_RS23200 (M9380_23195) | 1132..1344 | - | 213 | Protein_1 | DDE-type integrase/transposase/recombinase | - |
| M9380_RS23205 (M9380_23200) | 1688..1894 | + | 207 | WP_001145604.1 | hypothetical protein | - |
| M9380_RS23210 (M9380_23205) | 2092..3456 | + | 1365 | WP_000051932.1 | MFS transporter | - |
| M9380_RS23215 (M9380_23210) | 3506..3715 | + | 210 | Protein_4 | peptidoglycan-binding protein | - |
| M9380_RS23220 (M9380_23215) | 3809..4000 | - | 192 | Protein_5 | IS21 family transposase IS100 | Transposase |
| M9380_RS23225 (M9380_23220) | 4041..4538 | - | 498 | Protein_6 | IS66 family transposase ISEc47 | Transposase |
| M9380_RS23230 (M9380_23225) | 4641..5849 | - | 1209 | Protein_7 | IS3 family transposase | - |
| M9380_RS23235 (M9380_23230) | 6047..6763 | + | 717 | Protein_8 | IS21 family transposase IS100kyp | Transposase |
| M9380_RS23245 (M9380_23240) | 8327..8599 | - | 273 | WP_258249732.1 | hypothetical protein | - |
| M9380_RS23250 (M9380_23245) | 8766..8885 | - | 120 | Protein_11 | IS66 family transposase ISCro1 | Transposase |
| M9380_RS23255 (M9380_23250) | 9002..10699 | - | 1698 | WP_010921642.1 | hypothetical protein | VF |
| M9380_RS23260 (M9380_23255) | 10775..10924 | + | 150 | Protein_13 | IS1 family transposase | - |
| M9380_RS23265 (M9380_23260) | 11028..12440 | - | 1413 | WP_010921643.1 | hypothetical protein | VF |
| M9380_RS23270 (M9380_23265) | 12890..12952 | + | 63 | Protein_15 | IS66 family transposase ISCro1 | Transposase |
| M9380_RS23275 (M9380_23270) | 12973..13194 | - | 222 | Protein_16 | IS66 family transposase ISCro1 | Transposase |
| M9380_RS23280 (M9380_23275) | 13337..13530 | - | 194 | Protein_17 | HNH endonuclease signature motif containing protein | - |
| M9380_RS23285 | 13612..13743 | + | 132 | WP_000124143.1 | hypothetical protein | - |
| M9380_RS23295 (M9380_23285) | 14734..15207 | - | 474 | WP_005038443.1 | HTH-type transcriptional activator RhaR | VF |
| M9380_RS23300 (M9380_23290) | 15458..16654 | + | 1197 | WP_005063228.1 | IS110 family transposase ISSfl4 | Transposase |
| M9380_RS23305 (M9380_23295) | 16649..17073 | - | 425 | Protein_22 | hypothetical protein | - |
| M9380_RS23310 (M9380_23300) | 17301..17939 | - | 639 | WP_000502862.1 | ParB N-terminal domain-containing protein | - |
| M9380_RS23315 (M9380_23305) | 17924..18067 | - | 144 | Protein_24 | DUF3440 domain-containing protein | - |
| M9380_RS23330 (M9380_23320) | 20670..20951 | + | 282 | Protein_27 | IS4 family transposase ISSfl1 | Transposase |
| M9380_RS23335 (M9380_23325) | 21124..21609 | - | 486 | WP_000501974.1 | GNAT family N-acetyltransferase | Toxin Detail |
| M9380_RS23340 (M9380_23330) | 21597..21881 | - | 285 | WP_011114751.1 | DUF1778 domain-containing protein | Antitoxin Detail |
| M9380_RS23345 (M9380_23335) | 22783..22947 | + | 165 | WP_001346193.1 | hypothetical protein | - |
| M9380_RS23350 (M9380_23340) | 23201..24802 | - | 1602 | WP_005063916.1 | IS66 family transposase ISSfl3 | Transposase |
| M9380_RS23355 (M9380_23345) | 24799..25149 | - | 351 | WP_005048975.1 | IS66 family transposase ISSfl3 | Transposase |
| M9380_RS23360 (M9380_23350) | 25146..25820 | - | 675 | WP_001088287.1 | IS66 family transposase ISSfl3 | Transposase |
| M9380_RS23365 (M9380_23355) | 26392..27846 | + | 1455 | WP_094169927.1 | hypothetical protein | VF |
| M9380_RS23370 (M9380_23360) | 28184..29248 | + | 1065 | Protein_35 | IS3 family transposase IS600 | Transposase |
| M9380_RS23375 (M9380_23365) | 29289..30092 | + | 804 | Protein_36 | IS3 family transposase | - |
| M9380_RS23380 (M9380_23370) | 30207..30548 | + | 342 | Protein_37 | IS21 family transposase ISEc62 | Transposase |
| M9380_RS23385 (M9380_23375) | 30531..31368 | + | 838 | Protein_38 | IS21 family transposase ISEc62 | Transposase |
| M9380_RS23390 (M9380_23380) | 31418..32614 | - | 1197 | WP_005063228.1 | IS110 family transposase ISSfl4 | Transposase |
| M9380_RS23395 (M9380_23385) | 32806..33810 | - | 1005 | WP_000255980.1 | IS21 family transposase IS100kyp | Transposase |
| M9380_RS23400 (M9380_23390) | 34157..34973 | + | 817 | Protein_41 | IS110 family transposase | - |
| M9380_RS23405 (M9380_23395) | 35163..35942 | + | 780 | WP_005059304.1 | type III secretion system effector cysteine protease IpaJ | - |
| M9380_RS23410 (M9380_23400) | 36889..37818 | - | 930 | WP_000227976.1 | virulence regulon transcriptional activator VirB | - |
| M9380_RS23415 (M9380_23405) | 38035..38271 | - | 237 | WP_000588813.1 | phosphopantetheine-binding protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|